RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 RAP2BP61225 183 aa15.98■□□□□ 0.15
MSH6-202ENST00000411819 RRAS2P62070 204 aaPredicted RBP15.98■□□□□ 0.15
MSH6-202ENST00000411819 FGL1Q08830 312 aa15.98■□□□□ 0.15
MSH6-202ENST00000411819 H3BRN7 92 aa15.97■□□□□ 0.15
MSH6-202ENST00000411819 HBE1P02100 147 aa15.97■□□□□ 0.15
MSH6-202ENST00000411819 HIGD1AQ9Y241 93 aa15.97■□□□□ 0.15
MSH6-202ENST00000411819 TEX48A0A1B0GUV7 120 aa15.96■□□□□ 0.15
MSH6-202ENST00000411819 LOC102723971A0A1B0GUV8 181 aa15.96■□□□□ 0.15
MSH6-202ENST00000411819 CCNKO75909 580 aa15.96■□□□□ 0.15
MSH6-202ENST00000411819 METTL15P1P0C7V9 234 aa15.96■□□□□ 0.15
MSH6-202ENST00000411819 LINC00869P0C866 280 aa15.96■□□□□ 0.15
MSH6-202ENST00000411819 FAM222AQ5U5X8 452 aa15.96■□□□□ 0.15
MSH6-202ENST00000411819 IGFL4Q6B9Z1 124 aa15.96■□□□□ 0.15
MSH6-202ENST00000411819 C1orf158Q8N1D5 194 aa15.96■□□□□ 0.15
MSH6-202ENST00000411819 C17orf77Q96MU5 243 aa15.96■□□□□ 0.15
MSH6-202ENST00000411819 TMEM208Q9BTX3 173 aa15.96■□□□□ 0.15
MSH6-202ENST00000411819 SLC25A39Q9BZJ4 359 aaPredicted RBP15.96■□□□□ 0.15
MSH6-202ENST00000411819 OR5G3P0C626 314 aa15.95■□□□□ 0.14
MSH6-202ENST00000411819 P0DMU3 169 aa15.95■□□□□ 0.14
MSH6-202ENST00000411819 FAM231AP0DMU4 169 aa15.95■□□□□ 0.14
MSH6-202ENST00000411819 FAM231CP0DMU5 169 aa15.95■□□□□ 0.14
MSH6-202ENST00000411819 BTCP35070 178 aa15.95■□□□□ 0.14
MSH6-202ENST00000411819 IAH1Q2TAA2 248 aaPredicted RBP15.95■□□□□ 0.14
MSH6-202ENST00000411819 RNF182Q8N6D2 247 aa15.95■□□□□ 0.14
MSH6-202ENST00000411819 SMIM8Q96KF7 97 aa15.95■□□□□ 0.14
MSH6-202ENST00000411819 SDHCQ99643 169 aaPredicted RBP15.95■□□□□ 0.14
MSH6-202ENST00000411819 SHANK2-AS3Q9BTD1 123 aa15.95■□□□□ 0.14
MSH6-202ENST00000411819 DKK2Q9UBU2 259 aa15.95■□□□□ 0.14
MSH6-202ENST00000411819 PMS2P5A8MQ11 134 aa15.94■□□□□ 0.14
MSH6-202ENST00000411819 DLK1P80370 383 aa15.94■□□□□ 0.14
MSH6-202ENST00000411819 RRN3P1Q2M238 152 aa15.94■□□□□ 0.14
MSH6-202ENST00000411819 UHRF2Q96PU4 802 aa15.94■□□□□ 0.14
MSH6-202ENST00000411819 NIPSNAP3BQ9BS92 247 aa15.94■□□□□ 0.14
MSH6-202ENST00000411819 GSKIPQ9P0R6 139 aa15.94■□□□□ 0.14
MSH6-202ENST00000411819 MGAT4CQ9UBM8 478 aa15.94■□□□□ 0.14
MSH6-202ENST00000411819 YTHDF2Q9Y5A9 579 aaKnown RBP15.94■□□□□ 0.14
MSH6-202ENST00000411819 HYPMO75409 117 aa15.93■□□□□ 0.14
MSH6-202ENST00000411819 IL7P13232 177 aa15.93■□□□□ 0.14
MSH6-202ENST00000411819 HTN3P15516 51 aa15.93■□□□□ 0.14
MSH6-202ENST00000411819 RPL7P18124 248 aaKnown RBP15.93■□□□□ 0.14
MSH6-202ENST00000411819 CNN1P51911 297 aaKnown RBP15.93■□□□□ 0.14
MSH6-202ENST00000411819 SELENOTP62341 195 aa15.93■□□□□ 0.14
MSH6-202ENST00000411819 AMTNQ6UX39 209 aa15.93■□□□□ 0.14
MSH6-202ENST00000411819 TMEM14EPQ6UXP3 125 aa15.93■□□□□ 0.14
MSH6-202ENST00000411819 ZNF738Q8NE65 137 aa15.93■□□□□ 0.14
MSH6-202ENST00000411819 OR10P1Q8NGE3 313 aa15.93■□□□□ 0.14
MSH6-202ENST00000411819 IGF2BP2-AS1Q96M15 143 aa15.93■□□□□ 0.14
MSH6-202ENST00000411819 TRAV8-2A0A0B4J237 113 aa15.92■□□□□ 0.14
MSH6-202ENST00000411819 A8MTW9 85 aa15.92■□□□□ 0.14
MSH6-202ENST00000411819 M0R2Z0 102 aa15.92■□□□□ 0.14
MSH6-202ENST00000411819 DUSP14O95147 198 aaKnown RBP15.92■□□□□ 0.14
MSH6-202ENST00000411819 SPINK13Q1W4C9 94 aa15.92■□□□□ 0.14
MSH6-202ENST00000411819 ZBTB8BQ8NAP8 495 aaPredicted RBP15.92■□□□□ 0.14
MSH6-202ENST00000411819 NPVFQ9HCQ7 196 aa15.92■□□□□ 0.14
MSH6-202ENST00000411819 INSP01308 110 aa15.91■□□□□ 0.14
MSH6-202ENST00000411819 SLC38A11Q08AI6 406 aa15.91■□□□□ 0.14
MSH6-202ENST00000411819 S100A7AQ86SG5 101 aa15.91■□□□□ 0.14
MSH6-202ENST00000411819 POM121L12Q8N7R1 296 aa15.91■□□□□ 0.14
MSH6-202ENST00000411819 OR11H7Q8NGC8 314 aa15.91■□□□□ 0.14
MSH6-202ENST00000411819 ARL6Q9H0F7 186 aa15.91■□□□□ 0.14
MSH6-202ENST00000411819 PLA2G2EQ9NZK7 142 aa15.91■□□□□ 0.14
MSH6-202ENST00000411819 RCL1Q9Y2P8 373 aaKnown RBP15.91■□□□□ 0.14
MSH6-202ENST00000411819 HECTD4Q9Y4D8 3996 aa15.9■□□□□ 0.14
MSH6-202ENST00000411819 TSC22D2O75157 780 aa15.9■□□□□ 0.14
MSH6-202ENST00000411819 PLP1P60201 277 aa15.9■□□□□ 0.14
MSH6-202ENST00000411819 TEPPQ6URK8 271 aa15.9■□□□□ 0.14
MSH6-202ENST00000411819 UBE2DNLQ8IWF7 75 aa15.9■□□□□ 0.14
MSH6-202ENST00000411819 LRRC20Q8TCA0 184 aa15.9■□□□□ 0.14
MSH6-202ENST00000411819 MITD1Q8WV92 249 aa15.9■□□□□ 0.14
MSH6-202ENST00000411819 C20orf85Q9H1P6 137 aa15.9■□□□□ 0.14
MSH6-202ENST00000411819 FNDC10F2Z333 226 aa15.89■□□□□ 0.13
MSH6-202ENST00000411819 TAS2R30P59541 319 aa15.89■□□□□ 0.13
MSH6-202ENST00000411819 DAD1P61803 113 aa15.89■□□□□ 0.13
MSH6-202ENST00000411819 BAP18Q8IXM2 172 aa15.89■□□□□ 0.13
MSH6-202ENST00000411819 ARV1Q9H2C2 271 aa15.89■□□□□ 0.13
MSH6-202ENST00000411819 CCSO14618 274 aa15.88■□□□□ 0.13
MSH6-202ENST00000411819 HIST1H1AQ02539 215 aaPredicted RBP15.88■□□□□ 0.13
MSH6-202ENST00000411819 CNPY1Q3B7I2 92 aa15.88■□□□□ 0.13
MSH6-202ENST00000411819 FAM210BQ96KR6 192 aa15.88■□□□□ 0.13
MSH6-202ENST00000411819 GOSR2O14653 212 aa15.87■□□□□ 0.13
MSH6-202ENST00000411819 MBPP02686 304 aaPredicted RBP15.87■□□□□ 0.13
MSH6-202ENST00000411819 RHOBP62745 196 aa15.87■□□□□ 0.13
MSH6-202ENST00000411819 ZNF846Q147U1 533 aa15.87■□□□□ 0.13
MSH6-202ENST00000411819 ZNF546Q86UE3 836 aa15.87■□□□□ 0.13
MSH6-202ENST00000411819 PPP1R14DQ9NXH3 145 aa15.87■□□□□ 0.13
MSH6-202ENST00000411819 TRAV12-2A0A075B6T6 113 aa15.86■□□□□ 0.13
MSH6-202ENST00000411819 A0A087X0K7 114 aa15.86■□□□□ 0.13
MSH6-202ENST00000411819 C7orf66A4D0T2 115 aa15.86■□□□□ 0.13
MSH6-202ENST00000411819 ZNF705GA8MUZ8 300 aaPredicted RBP15.86■□□□□ 0.13
MSH6-202ENST00000411819 FAM25EA8MYX2 175 aa15.86■□□□□ 0.13
MSH6-202ENST00000411819 BOLA2-SMG1P6H3BVE0 249 aa15.86■□□□□ 0.13
MSH6-202ENST00000411819 K7EPK0 472 aa15.86■□□□□ 0.13
MSH6-202ENST00000411819 L7N2F9 121 aa15.86■□□□□ 0.13
MSH6-202ENST00000411819 M0R2N4 97 aa15.86■□□□□ 0.13
MSH6-202ENST00000411819 CRXO43186 299 aaPredicted RBP15.86■□□□□ 0.13
MSH6-202ENST00000411819 LYRM1O43325 122 aa15.86■□□□□ 0.13
MSH6-202ENST00000411819 PRB4P10163 310 aaPredicted RBP15.86■□□□□ 0.13
MSH6-202ENST00000411819 CXCL3P19876 107 aa15.86■□□□□ 0.13
MSH6-202ENST00000411819 VAMP2P63027 116 aa15.86■□□□□ 0.13
MSH6-202ENST00000411819 ARL16Q0P5N6 197 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms