RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 SPRY2O43597 315 aa22.87■■□□□ 1.25
TRAF3IP1-203ENST00000409739 FGF7P21781 194 aa22.87■■□□□ 1.25
TRAF3IP1-203ENST00000409739 OPCMLQ14982 345 aa22.87■■□□□ 1.25
TRAF3IP1-203ENST00000409739 MIC13Q5XKP0 118 aa22.87■■□□□ 1.25
TRAF3IP1-203ENST00000409739 RNF183Q96D59 192 aa22.87■■□□□ 1.25
TRAF3IP1-203ENST00000409739 RSG1Q9BU20 258 aa22.87■■□□□ 1.25
TRAF3IP1-203ENST00000409739 ID1P41134 155 aa22.86■■□□□ 1.25
TRAF3IP1-203ENST00000409739 MEOX2P50222 304 aa22.86■■□□□ 1.25
TRAF3IP1-203ENST00000409739 PRR20EP86478 221 aa22.86■■□□□ 1.25
TRAF3IP1-203ENST00000409739 PRR20CP86479 221 aa22.86■■□□□ 1.25
TRAF3IP1-203ENST00000409739 PRR20DP86480 221 aa22.86■■□□□ 1.25
TRAF3IP1-203ENST00000409739 PRR20BP86481 221 aa22.86■■□□□ 1.25
TRAF3IP1-203ENST00000409739 PRR20AP86496 221 aa22.86■■□□□ 1.25
TRAF3IP1-203ENST00000409739 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa22.86■■□□□ 1.25
TRAF3IP1-203ENST00000409739 S100A7AQ86SG5 101 aa22.86■■□□□ 1.25
TRAF3IP1-203ENST00000409739 OR11H7Q8NGC8 314 aa22.86■■□□□ 1.25
TRAF3IP1-203ENST00000409739 MED28Q9H204 178 aa22.86■■□□□ 1.25
TRAF3IP1-203ENST00000409739 MBD2Q9UBB5 411 aa22.86■■□□□ 1.25
TRAF3IP1-203ENST00000409739 ISLRO14498 428 aa22.85■■□□□ 1.25
TRAF3IP1-203ENST00000409739 COX7A2P2O60397 106 aa22.85■■□□□ 1.25
TRAF3IP1-203ENST00000409739 CA1P00915 261 aaPredicted RBP22.85■■□□□ 1.25
TRAF3IP1-203ENST00000409739 FCN2Q15485 313 aa22.85■■□□□ 1.25
TRAF3IP1-203ENST00000409739 SAMD13Q5VXD3 122 aa22.85■■□□□ 1.25
TRAF3IP1-203ENST00000409739 MUC7Q8TAX7 377 aa22.85■■□□□ 1.25
TRAF3IP1-203ENST00000409739 TMEM37Q8WXS4 190 aa22.85■■□□□ 1.25
TRAF3IP1-203ENST00000409739 RPL7P18124 248 aaKnown RBP22.84■■□□□ 1.25
TRAF3IP1-203ENST00000409739 LINC00305Q7Z4B0 112 aa22.84■■□□□ 1.25
TRAF3IP1-203ENST00000409739 CHAC2Q8WUX2 184 aa22.84■■□□□ 1.25
TRAF3IP1-203ENST00000409739 LINC00052Q96N35 136 aa22.84■■□□□ 1.25
TRAF3IP1-203ENST00000409739 RPL29P47914 159 aaKnown RBP22.83■■□□□ 1.25
TRAF3IP1-203ENST00000409739 CLINT1Q14677 625 aa22.83■■□□□ 1.25
TRAF3IP1-203ENST00000409739 ELOA3CA0A087WX78 387 aaPredicted RBP22.82■■□□□ 1.24
TRAF3IP1-203ENST00000409739 MPDU1O75352 247 aa22.82■■□□□ 1.24
TRAF3IP1-203ENST00000409739 ATF4P18848 351 aaPredicted RBP22.82■■□□□ 1.24
TRAF3IP1-203ENST00000409739 Q6ZRG5 221 aa22.82■■□□□ 1.24
TRAF3IP1-203ENST00000409739 THAP6Q8TBB0 222 aa22.82■■□□□ 1.24
TRAF3IP1-203ENST00000409739 C16orf92Q96LL3 132 aa22.82■■□□□ 1.24
TRAF3IP1-203ENST00000409739 NPCDR1Q9BY65 106 aa22.82■■□□□ 1.24
TRAF3IP1-203ENST00000409739 SPP1P10451 314 aa22.81■■□□□ 1.24
TRAF3IP1-203ENST00000409739 DEFB1P60022 68 aa22.81■■□□□ 1.24
TRAF3IP1-203ENST00000409739 B2MP61769 119 aa22.81■■□□□ 1.24
TRAF3IP1-203ENST00000409739 C10orf113Q5VZT2 155 aa22.81■■□□□ 1.24
TRAF3IP1-203ENST00000409739 SLC39A9Q9NUM3 307 aa22.81■■□□□ 1.24
TRAF3IP1-203ENST00000409739 RNF24Q9Y225 148 aa22.81■■□□□ 1.24
TRAF3IP1-203ENST00000409739 HSPB11Q9Y547 144 aa22.81■■□□□ 1.24
TRAF3IP1-203ENST00000409739 PXMP4Q9Y6I8 212 aa22.81■■□□□ 1.24
TRAF3IP1-203ENST00000409739 H3BMM0 161 aa22.8■■□□□ 1.24
TRAF3IP1-203ENST00000409739 C3orf84H3BNL1 204 aa22.8■■□□□ 1.24
TRAF3IP1-203ENST00000409739 GIG44P09565 113 aaPredicted RBP22.8■■□□□ 1.24
TRAF3IP1-203ENST00000409739 LYL1P12980 280 aa22.8■■□□□ 1.24
TRAF3IP1-203ENST00000409739 HLA-DRB4P13762 266 aa22.8■■□□□ 1.24
TRAF3IP1-203ENST00000409739 C4BPBP20851 252 aa22.8■■□□□ 1.24
TRAF3IP1-203ENST00000409739 OXA1LQ15070 435 aa22.8■■□□□ 1.24
TRAF3IP1-203ENST00000409739 GDF5OSQ5U4N7 250 aa22.8■■□□□ 1.24
TRAF3IP1-203ENST00000409739 MORN5Q5VZ52 161 aa22.8■■□□□ 1.24
TRAF3IP1-203ENST00000409739 MORN3Q6PF18 240 aaPredicted RBP22.8■■□□□ 1.24
TRAF3IP1-203ENST00000409739 C20orf173Q96LM9 149 aa22.8■■□□□ 1.24
TRAF3IP1-203ENST00000409739 HLA-DRB4X5D2U9 266 aa22.8■■□□□ 1.24
TRAF3IP1-203ENST00000409739 A0A087X0K7 114 aa22.79■■□□□ 1.24
TRAF3IP1-203ENST00000409739 MRPS12O15235 138 aaKnown RBP22.79■■□□□ 1.24
TRAF3IP1-203ENST00000409739 OR1L4Q8NGR5 311 aa22.79■■□□□ 1.24
TRAF3IP1-203ENST00000409739 GATAD1Q8WUU5 269 aa22.79■■□□□ 1.24
TRAF3IP1-203ENST00000409739 SAV1Q9H4B6 383 aaPredicted RBP22.79■■□□□ 1.24
TRAF3IP1-203ENST00000409739 DNAJC4Q9NNZ3 241 aa22.79■■□□□ 1.24
TRAF3IP1-203ENST00000409739 RPL12P30050 165 aaKnown RBP22.78■■□□□ 1.24
TRAF3IP1-203ENST00000409739 FGL1Q08830 312 aa22.78■■□□□ 1.24
TRAF3IP1-203ENST00000409739 FOXI2Q6ZQN5 318 aa22.78■■□□□ 1.24
TRAF3IP1-203ENST00000409739 PFDN5Q99471 154 aa22.78■■□□□ 1.24
TRAF3IP1-203ENST00000409739 WDR61Q9GZS3 305 aaKnown RBP22.77■■□□□ 1.24
TRAF3IP1-203ENST00000409739 TRAV8-2A0A0B4J237 113 aa22.76■■□□□ 1.23
TRAF3IP1-203ENST00000409739 ATP5SQ99766 215 aa22.76■■□□□ 1.23
TRAF3IP1-203ENST00000409739 TMEM41BQ5BJD5 291 aa22.75■■□□□ 1.23
TRAF3IP1-203ENST00000409739 IGFL4Q6B9Z1 124 aa22.75■■□□□ 1.23
TRAF3IP1-203ENST00000409739 RPRMQ9NS64 109 aa22.75■■□□□ 1.23
TRAF3IP1-203ENST00000409739 F6UB75 175 aa22.74■■□□□ 1.23
TRAF3IP1-203ENST00000409739 BPIFA4PQ86YQ2 179 aa22.74■■□□□ 1.23
TRAF3IP1-203ENST00000409739 SMIM3Q9BZL3 60 aa22.74■■□□□ 1.23
TRAF3IP1-203ENST00000409739 A0A0J9YWU9 116 aa22.73■■□□□ 1.23
TRAF3IP1-203ENST00000409739 GIPP09681 153 aaPredicted RBP22.73■■□□□ 1.23
TRAF3IP1-203ENST00000409739 RNF182Q8N6D2 247 aa22.73■■□□□ 1.23
TRAF3IP1-203ENST00000409739 RARRES2Q99969 163 aa22.73■■□□□ 1.23
TRAF3IP1-203ENST00000409739 CSMD3Q7Z407 3707 aa22.73■■□□□ 1.23
TRAF3IP1-203ENST00000409739 CASC10Q5T4H9 136 aa22.72■■□□□ 1.23
TRAF3IP1-203ENST00000409739 OR11H2Q8NH07 326 aa22.72■■□□□ 1.23
TRAF3IP1-203ENST00000409739 TRAV5A0A0B4J249 113 aa22.71■■□□□ 1.23
TRAF3IP1-203ENST00000409739 A0A0J9YX75 114 aa22.71■■□□□ 1.23
TRAF3IP1-203ENST00000409739 GCSAMLQ5JQS6 135 aa22.71■■□□□ 1.23
TRAF3IP1-203ENST00000409739 SPATA31B1PQ5VZV4 182 aa22.71■■□□□ 1.23
TRAF3IP1-203ENST00000409739 ASB13Q8WXK3 278 aa22.71■■□□□ 1.23
TRAF3IP1-203ENST00000409739 IGKV3-20P01619 116 aa22.7■■□□□ 1.22
TRAF3IP1-203ENST00000409739 CXCL2P19875 107 aa22.7■■□□□ 1.22
TRAF3IP1-203ENST00000409739 NUTF2P61970 127 aaKnown RBP22.7■■□□□ 1.22
TRAF3IP1-203ENST00000409739 EBLN2Q6P2I7 272 aa22.7■■□□□ 1.22
TRAF3IP1-203ENST00000409739 LCN15Q6UWW0 184 aa22.7■■□□□ 1.22
TRAF3IP1-203ENST00000409739 CLUHP3Q96NS8 147 aa22.7■■□□□ 1.22
TRAF3IP1-203ENST00000409739 KCNIP2Q9NS61 270 aa22.7■■□□□ 1.22
TRAF3IP1-203ENST00000409739 CLEC5AQ9NY25 188 aa22.7■■□□□ 1.22
TRAF3IP1-203ENST00000409739 SNRPCP09234 159 aaKnown RBP22.69■■□□□ 1.22
TRAF3IP1-203ENST00000409739 IGLC2P0DOY2 106 aa22.69■■□□□ 1.22
TRAF3IP1-203ENST00000409739 ZFAND6Q6FIF0 208 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms