RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 MGAT4CQ9UBM8 478 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 AGRNO00468 2067 aa10.51□□□□□ -0.73
NIF3L1-205ENST00000409588 SMCO3A2RU48 225 aa10.51□□□□□ -0.73
NIF3L1-205ENST00000409588 DEFB4AO15263 64 aa10.51□□□□□ -0.73
NIF3L1-205ENST00000409588 PSG9Q00887 426 aa10.51□□□□□ -0.73
NIF3L1-205ENST00000409588 ZNF705AQ6ZN79 300 aaPredicted RBP10.51□□□□□ -0.73
NIF3L1-205ENST00000409588 S100ZQ8WXG8 99 aa10.51□□□□□ -0.73
NIF3L1-205ENST00000409588 SLC25A22Q9H936 323 aa10.51□□□□□ -0.73
NIF3L1-205ENST00000409588 CLEC5AQ9NY25 188 aa10.51□□□□□ -0.73
NIF3L1-205ENST00000409588 HIGD1AQ9Y241 93 aa10.51□□□□□ -0.73
NIF3L1-205ENST00000409588 PLECQ15149 4684 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-205ENST00000409588 TRAV10A0A0B4J240 114 aa10.5□□□□□ -0.73
NIF3L1-205ENST00000409588 TEX48A0A1B0GUV7 120 aa10.5□□□□□ -0.73
NIF3L1-205ENST00000409588 DEDDO75618 318 aa10.5□□□□□ -0.73
NIF3L1-205ENST00000409588 DUSP14O95147 198 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-205ENST00000409588 AMBPP02760 352 aa10.5□□□□□ -0.73
NIF3L1-205ENST00000409588 SHANK2-AS3Q9BTD1 123 aa10.5□□□□□ -0.73
NIF3L1-205ENST00000409588 SLC25A39Q9BZJ4 359 aaPredicted RBP10.5□□□□□ -0.73
NIF3L1-205ENST00000409588 SLC25A32Q9H2D1 315 aa10.5□□□□□ -0.73
NIF3L1-205ENST00000409588 ELOA3CA0A087WX78 387 aaPredicted RBP10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 A0A0J9YX75 114 aa10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 C7orf66A4D0T2 115 aa10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 ZNF705FA8MVS1 300 aaPredicted RBP10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 L7N2F9 121 aa10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 METTL15P1P0C7V9 234 aa10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 ZNF705DP0CH99 300 aaPredicted RBP10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 ZNF705BP0CI00 300 aaPredicted RBP10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 GATA2P23769 480 aaPredicted RBP10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 HLA-DMBP28068 263 aa10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 VAMP2P63027 116 aa10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 RAB31Q13636 194 aa10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 MZT2BQ6NZ67 158 aa10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 TMEM182Q6ZP80 229 aaPredicted RBP10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 OR4B1Q8NGF8 309 aa10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 ZNF431Q8TF32 576 aaPredicted RBP10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 DOK5Q9P104 306 aa10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 GOLT1BQ9Y3E0 138 aa10.49□□□□□ -0.73
NIF3L1-205ENST00000409588 HYDINQ4G0P3 5121 aa10.48□□□□□ -0.73
NIF3L1-205ENST00000409588 H3BRN7 92 aa10.48□□□□□ -0.73
NIF3L1-205ENST00000409588 GOSR2O14653 212 aa10.48□□□□□ -0.73
NIF3L1-205ENST00000409588 SCGB1D2O95969 90 aa10.48□□□□□ -0.73
NIF3L1-205ENST00000409588 MBPP02686 304 aaPredicted RBP10.48□□□□□ -0.73
NIF3L1-205ENST00000409588 LINC00869P0C866 280 aa10.48□□□□□ -0.73
NIF3L1-205ENST00000409588 SPART-AS1P0CW21 52 aa10.48□□□□□ -0.73
NIF3L1-205ENST00000409588 PVALBP20472 110 aaPredicted RBP10.48□□□□□ -0.73
NIF3L1-205ENST00000409588 B2MP61769 119 aa10.48□□□□□ -0.73
NIF3L1-205ENST00000409588 GDF5OSQ5U4N7 250 aa10.48□□□□□ -0.73
NIF3L1-205ENST00000409588 FAM78BQ5VT40 261 aa10.48□□□□□ -0.73
NIF3L1-205ENST00000409588 ZNF546Q86UE3 836 aa10.48□□□□□ -0.73
NIF3L1-205ENST00000409588 RFNGQ9Y644 331 aa10.48□□□□□ -0.73
NIF3L1-205ENST00000409588 FAM240BA0A1B0GVZ2 78 aa10.47□□□□□ -0.73
NIF3L1-205ENST00000409588 SCO2A0A1W2PP80 73 aa10.47□□□□□ -0.73
NIF3L1-205ENST00000409588 A8MTW9 85 aa10.47□□□□□ -0.73
NIF3L1-205ENST00000409588 IGLL5B9A064 214 aa10.47□□□□□ -0.73
NIF3L1-205ENST00000409588 OR5G3P0C626 314 aa10.47□□□□□ -0.73
NIF3L1-205ENST00000409588 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.47□□□□□ -0.73
NIF3L1-205ENST00000409588 C12orf45Q8N5I9 185 aaPredicted RBP10.47□□□□□ -0.73
NIF3L1-205ENST00000409588 ZNF709Q8N972 641 aa10.47□□□□□ -0.73
NIF3L1-205ENST00000409588 C2orf50Q96LR7 162 aa10.47□□□□□ -0.73
NIF3L1-205ENST00000409588 RNF126Q9BV68 326 aa10.47□□□□□ -0.73
NIF3L1-205ENST00000409588 NUDT15Q9NV35 164 aa10.47□□□□□ -0.73
NIF3L1-205ENST00000409588 RCL1Q9Y2P8 373 aaKnown RBP10.47□□□□□ -0.73
NIF3L1-205ENST00000409588 TRAV6A0A075B6T7 132 aa10.46□□□□□ -0.73
NIF3L1-205ENST00000409588 A0A087X0K7 114 aa10.46□□□□□ -0.73
NIF3L1-205ENST00000409588 C5orf51A6NDU8 294 aa10.46□□□□□ -0.73
NIF3L1-205ENST00000409588 H2AFB2P0C5Z0 115 aa10.46□□□□□ -0.73
NIF3L1-205ENST00000409588 CXCL2P19875 107 aa10.46□□□□□ -0.73
NIF3L1-205ENST00000409588 RRAS2P62070 204 aaPredicted RBP10.46□□□□□ -0.73
NIF3L1-205ENST00000409588 FAM210BQ96KR6 192 aa10.46□□□□□ -0.73
NIF3L1-205ENST00000409588 ARL6Q9H0F7 186 aa10.46□□□□□ -0.73
NIF3L1-205ENST00000409588 APLNQ9ULZ1 77 aa10.46□□□□□ -0.73
NIF3L1-205ENST00000409588 ALMS1Q8TCU4 4167 aa10.46□□□□□ -0.74
NIF3L1-205ENST00000409588 AGPAT2O15120 278 aa10.45□□□□□ -0.74
NIF3L1-205ENST00000409588 IGKV3-20P01619 116 aa10.45□□□□□ -0.74
NIF3L1-205ENST00000409588 HBE1P02100 147 aa10.45□□□□□ -0.74
NIF3L1-205ENST00000409588 S100A11P31949 105 aa10.45□□□□□ -0.74
NIF3L1-205ENST00000409588 OXA1LQ15070 435 aa10.45□□□□□ -0.74
NIF3L1-205ENST00000409588 C12orf74Q32Q52 190 aa10.45□□□□□ -0.74
NIF3L1-205ENST00000409588 GSG1LQ6UXU4 331 aa10.45□□□□□ -0.74
NIF3L1-205ENST00000409588 Q6ZRG5 221 aa10.45□□□□□ -0.74
NIF3L1-205ENST00000409588 Q6ZTC4 211 aa10.45□□□□□ -0.74
NIF3L1-205ENST00000409588 LRRC20Q8TCA0 184 aa10.45□□□□□ -0.74
NIF3L1-205ENST00000409588 IGF2BP2-AS1Q96M15 143 aa10.45□□□□□ -0.74
NIF3L1-205ENST00000409588 C17orf77Q96MU5 243 aa10.45□□□□□ -0.74
NIF3L1-205ENST00000409588 ARV1Q9H2C2 271 aa10.45□□□□□ -0.74
NIF3L1-205ENST00000409588 DEFB131BA0A096LNP1 70 aa10.44□□□□□ -0.74
NIF3L1-205ENST00000409588 FAM25EA8MYX2 175 aa10.44□□□□□ -0.74
NIF3L1-205ENST00000409588 BCAP31P51572 246 aa10.44□□□□□ -0.74
NIF3L1-205ENST00000409588 ASAH1Q13510 395 aa10.44□□□□□ -0.74
NIF3L1-205ENST00000409588 BPIFA4PQ86YQ2 179 aa10.44□□□□□ -0.74
NIF3L1-205ENST00000409588 C20orf173Q96LM9 149 aa10.44□□□□□ -0.74
NIF3L1-205ENST00000409588 SCRT1Q9BWW7 348 aa10.44□□□□□ -0.74
NIF3L1-205ENST00000409588 SLC35B3Q9H1N7 401 aa10.44□□□□□ -0.74
NIF3L1-205ENST00000409588 F6UB75 175 aa10.43□□□□□ -0.74
NIF3L1-205ENST00000409588 CAV2P51636 162 aa10.43□□□□□ -0.74
NIF3L1-205ENST00000409588 HBG1P69891 147 aa10.43□□□□□ -0.74
NIF3L1-205ENST00000409588 HBG2P69892 147 aa10.43□□□□□ -0.74
NIF3L1-205ENST00000409588 FGL1Q08830 312 aa10.43□□□□□ -0.74
NIF3L1-205ENST00000409588 ATP6V1FQ16864 119 aa10.43□□□□□ -0.74
NIF3L1-205ENST00000409588 RRN3P1Q2M238 152 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms