RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 HIST1H2BDP58876 126 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 HIST1H2BCP62807 126 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 RPL8P62917 257 aaKnown RBP9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 HIST2H2BEQ16778 126 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 CST9LP1Q5W188 147 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 OR1N2Q8NGR9 330 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 CACNG8Q8WXS5 425 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 HIST1H2BHQ93079 126 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 HIST1H2BNQ99877 126 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 HIST1H2BMQ99879 126 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 WASHC3Q9Y3C0 194 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 ELOA3CA0A087WX78 387 aaPredicted RBP9.76□□□□□ -0.85
CHRNA1-205ENST00000409542 TRGC2P03986 189 aa9.76□□□□□ -0.85
CHRNA1-205ENST00000409542 MC5RP33032 325 aa9.76□□□□□ -0.85
CHRNA1-205ENST00000409542 GALR1P47211 349 aa9.76□□□□□ -0.85
CHRNA1-205ENST00000409542 UBE2G2P60604 165 aa9.76□□□□□ -0.85
CHRNA1-205ENST00000409542 ZNF491Q8N8L2 437 aa9.76□□□□□ -0.85
CHRNA1-205ENST00000409542 OR51G1Q8NGK1 321 aa9.76□□□□□ -0.85
CHRNA1-205ENST00000409542 OR2T10Q8NGZ9 312 aa9.76□□□□□ -0.85
CHRNA1-205ENST00000409542 C11orf52Q96A22 123 aa9.76□□□□□ -0.85
CHRNA1-205ENST00000409542 COMMD5Q9GZQ3 224 aa9.76□□□□□ -0.85
CHRNA1-205ENST00000409542 EDA2RQ9HAV5 297 aa9.76□□□□□ -0.85
CHRNA1-205ENST00000409542 FUT9Q9Y231 359 aa9.76□□□□□ -0.85
CHRNA1-205ENST00000409542 PPP1R2P9O14990 202 aa9.75□□□□□ -0.85
CHRNA1-205ENST00000409542 GGCTO75223 188 aaKnown RBP9.75□□□□□ -0.85
CHRNA1-205ENST00000409542 IGLV2-23P01705 113 aa9.75□□□□□ -0.85
CHRNA1-205ENST00000409542 AREGP15514 252 aa9.75□□□□□ -0.85
CHRNA1-205ENST00000409542 INSL3P51460 131 aa9.75□□□□□ -0.85
CHRNA1-205ENST00000409542 NDUFA6P56556 154 aa9.75□□□□□ -0.85
CHRNA1-205ENST00000409542 ERHP84090 104 aaKnown RBP9.75□□□□□ -0.85
CHRNA1-205ENST00000409542 LINC01551Q86U37 167 aa9.75□□□□□ -0.85
CHRNA1-205ENST00000409542 BTF3L4Q96K17 158 aa9.75□□□□□ -0.85
CHRNA1-205ENST00000409542 IMMP2LQ96T52 175 aa9.75□□□□□ -0.85
CHRNA1-205ENST00000409542 RASL11BQ9BPW5 248 aa9.75□□□□□ -0.85
CHRNA1-205ENST00000409542 ZMAT4Q9H898 229 aa9.75□□□□□ -0.85
CHRNA1-205ENST00000409542 G3V318 75 aa9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 NDUFB4O95168 129 aa9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 TYMSP04818 313 aa9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 TRGC1P0CF51 173 aa9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 GP9P14770 177 aa9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 PPIFP30405 207 aaKnown RBP9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 GAMTQ14353 236 aa9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 VMA21Q3ZAQ7 101 aa9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 SPATA31B1PQ5VZV4 182 aa9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 SLC16A13Q7RTY0 426 aa9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 RNASEH2CQ8TDP1 164 aaKnown RBP9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 DLX4Q92988 240 aaPredicted RBP9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 RNF2Q99496 336 aa9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 TM2D3Q9BRN9 247 aa9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 SEPSECSQ9HD40 501 aaKnown RBP9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 TMEM167BQ9NRX6 74 aa9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 YTHDF2Q9Y5A9 579 aaKnown RBP9.74□□□□□ -0.85
CHRNA1-205ENST00000409542 OVOL1O14753 267 aa9.73□□□□□ -0.85
CHRNA1-205ENST00000409542 MOSP00540 346 aa9.73□□□□□ -0.85
CHRNA1-205ENST00000409542 IGF1P05019 195 aa9.73□□□□□ -0.85
CHRNA1-205ENST00000409542 OR5G3P0C626 314 aa9.73□□□□□ -0.85
CHRNA1-205ENST00000409542 OR10J1P30954 320 aa9.73□□□□□ -0.85
CHRNA1-205ENST00000409542 LGALS7P47929 136 aa9.73□□□□□ -0.85
CHRNA1-205ENST00000409542 SLURP1P55000 103 aa9.73□□□□□ -0.85
CHRNA1-205ENST00000409542 KCNIP4Q6PIL6 250 aa9.73□□□□□ -0.85
CHRNA1-205ENST00000409542 FRZBQ92765 325 aa9.73□□□□□ -0.85
CHRNA1-205ENST00000409542 UBE2E2Q96LR5 201 aa9.73□□□□□ -0.85
CHRNA1-205ENST00000409542 UHRF2Q96PU4 802 aa9.73□□□□□ -0.85
CHRNA1-205ENST00000409542 MRPL32Q9BYC8 188 aaKnown RBP9.73□□□□□ -0.85
CHRNA1-205ENST00000409542 TECRQ9NZ01 308 aaKnown RBP9.73□□□□□ -0.85
CHRNA1-205ENST00000409542 LY96Q9Y6Y9 160 aa9.73□□□□□ -0.85
CHRNA1-205ENST00000409542 IGKV1OR2-108A0A075B7D4 117 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 SCO2A0A1W2PP80 73 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 PCP4L1A6NKN8 68 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 CGB1A6NKQ9 187 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 SAP30O75446 220 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 SUB1P53999 127 aaKnown RBP eCLIP9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 FAM3BP58499 235 aaPredicted RBP9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 TAS2R45P59539 299 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 PQLC2Q6ZP29 291 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 TEX45Q8NA69 505 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 OR10W1Q8NGF6 305 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 RITA1Q96K30 269 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 ZNF430Q9H8G1 570 aaPredicted RBP9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 IFITM10A6NMD0 228 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 C9JCJ5 164 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 PPP5D1E7EU14 171 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 IGLV1-40P01703 118 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 FAM78BQ5VT40 261 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 PVRIGQ6DKI7 326 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 MIR17HGQ75NE6 70 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 Q8N1Y9 231 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 HIST3H2BBQ8N257 126 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 NECAP1Q8NC96 275 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 OR4X1Q8NH49 305 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 ELOVL1Q9BW60 279 aa9.72□□□□□ -0.85
CHRNA1-205ENST00000409542 ATP6V0E1O15342 81 aa9.71□□□□□ -0.86
CHRNA1-205ENST00000409542 CNTFRP26992 372 aa9.71□□□□□ -0.86
CHRNA1-205ENST00000409542 S100A2P29034 98 aa9.71□□□□□ -0.86
CHRNA1-205ENST00000409542 RAB9AP51151 201 aa9.71□□□□□ -0.86
CHRNA1-205ENST00000409542 WT1-ASQ06250 92 aa9.71□□□□□ -0.86
CHRNA1-205ENST00000409542 MRGPRG-AS1Q2M3A8 158 aa9.71□□□□□ -0.86
CHRNA1-205ENST00000409542 THAP8Q8NA92 274 aa9.71□□□□□ -0.86
CHRNA1-205ENST00000409542 SFRP2Q96HF1 295 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms