RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 ZNF586Q9NXT0 402 aa10.82□□□□□ -0.68
GPNMB-203ENST00000409458 RNASE1P07998 156 aaKnown RBP10.82□□□□□ -0.68
GPNMB-203ENST00000409458 ELANEP08246 267 aa10.82□□□□□ -0.68
GPNMB-203ENST00000409458 HIST1H1EP10412 219 aaKnown RBP10.82□□□□□ -0.68
GPNMB-203ENST00000409458 CD99P14209 185 aa10.82□□□□□ -0.68
GPNMB-203ENST00000409458 MYCNOSP40205 109 aa10.82□□□□□ -0.68
GPNMB-203ENST00000409458 RPL15P61313 204 aaKnown RBP10.82□□□□□ -0.68
GPNMB-203ENST00000409458 SUMO1P63165 101 aaKnown RBP10.82□□□□□ -0.68
GPNMB-203ENST00000409458 BTN1A1Q13410 526 aa10.82□□□□□ -0.68
GPNMB-203ENST00000409458 TVP23CQ96ET8 276 aa10.82□□□□□ -0.68
GPNMB-203ENST00000409458 ELOVL1Q9BW60 279 aa10.82□□□□□ -0.68
GPNMB-203ENST00000409458 ZNF207O43670 478 aaKnown RBP10.81□□□□□ -0.68
GPNMB-203ENST00000409458 CRYBB3P26998 211 aa10.81□□□□□ -0.68
GPNMB-203ENST00000409458 AKR1C3P42330 323 aa10.81□□□□□ -0.68
GPNMB-203ENST00000409458 RANP62826 216 aaKnown RBP10.81□□□□□ -0.68
GPNMB-203ENST00000409458 FAM74A3Q4VXF1 159 aa10.81□□□□□ -0.68
GPNMB-203ENST00000409458 UNQ9165/PRO28630Q6UXU0 137 aa10.81□□□□□ -0.68
GPNMB-203ENST00000409458 RNF152Q8N8N0 203 aa10.81□□□□□ -0.68
GPNMB-203ENST00000409458 OR4F17Q8NGA8 305 aa10.81□□□□□ -0.68
GPNMB-203ENST00000409458 NAT8Q9UHE5 227 aa10.81□□□□□ -0.68
GPNMB-203ENST00000409458 INAFM1C9JVW0 142 aa10.8□□□□□ -0.68
GPNMB-203ENST00000409458 NDUFA4O00483 81 aa10.8□□□□□ -0.68
GPNMB-203ENST00000409458 HILS1P60008 231 aa10.8□□□□□ -0.68
GPNMB-203ENST00000409458 FAM209BQ5JX69 171 aa10.8□□□□□ -0.68
GPNMB-203ENST00000409458 ZNF418Q8TF45 676 aaPredicted RBP10.8□□□□□ -0.68
GPNMB-203ENST00000409458 C17orf77Q96MU5 243 aa10.8□□□□□ -0.68
GPNMB-203ENST00000409458 METTL26Q96S19 204 aa10.8□□□□□ -0.68
GPNMB-203ENST00000409458 Q9H3A6 140 aa10.8□□□□□ -0.68
GPNMB-203ENST00000409458 SDF2L1Q9HCN8 221 aa10.8□□□□□ -0.68
GPNMB-203ENST00000409458 PEF1Q9UBV8 284 aaKnown RBP10.8□□□□□ -0.68
GPNMB-203ENST00000409458 TRBV19A0A075B6N1 114 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 IGHV3-66A0A0C4DH42 116 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 C7orf77A4D0Y5 90 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 APOHP02749 345 aaPredicted RBP10.79□□□□□ -0.68
GPNMB-203ENST00000409458 CBLN2Q8IUK8 224 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 RPS10P5Q9NQ39 176 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 DNASE2O00115 360 aaPredicted RBP10.79□□□□□ -0.68
GPNMB-203ENST00000409458 SLC17A3O00476 420 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 BUB3O43684 328 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 GGCTO75223 188 aaKnown RBP10.79□□□□□ -0.68
GPNMB-203ENST00000409458 FOSL1P15407 271 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 RPL7P18124 248 aaKnown RBP10.79□□□□□ -0.68
GPNMB-203ENST00000409458 S100A7P31151 101 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 GNG5P63218 68 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 RHEBQ15382 184 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 TMEM241Q24JQ0 296 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 TMEM88Q6PEY1 159 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 OR8I2Q8N0Y5 310 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 KLHDC1Q8N7A1 406 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 C2CD4CQ8TF44 421 aa10.79□□□□□ -0.68
GPNMB-203ENST00000409458 TRBV20OR9-2A0A075B6H5 130 aa10.78□□□□□ -0.68
GPNMB-203ENST00000409458 IGHV3OR16-13A0A075B7E8 117 aa10.78□□□□□ -0.68
GPNMB-203ENST00000409458 IGHV3-49A0A0A0MS15 119 aa10.78□□□□□ -0.68
GPNMB-203ENST00000409458 IGHV3-74A0A0B4J1X5 117 aa10.78□□□□□ -0.68
GPNMB-203ENST00000409458 PGPA6NDG6 321 aa10.78□□□□□ -0.68
GPNMB-203ENST00000409458 LGALS1P09382 135 aaKnown RBP10.78□□□□□ -0.68
GPNMB-203ENST00000409458 RPL35P42766 123 aaKnown RBP10.78□□□□□ -0.68
GPNMB-203ENST00000409458 RPL23P62829 140 aaKnown RBP10.78□□□□□ -0.68
GPNMB-203ENST00000409458 PNRC1Q12796 327 aaPredicted RBP10.78□□□□□ -0.68
GPNMB-203ENST00000409458 TMEM190Q8WZ59 177 aa10.78□□□□□ -0.68
GPNMB-203ENST00000409458 UBE2E2Q96LR5 201 aa10.78□□□□□ -0.68
GPNMB-203ENST00000409458 RNF24Q9Y225 148 aa10.78□□□□□ -0.68
GPNMB-203ENST00000409458 SMAD5-AS1Q9Y6J3 95 aa10.78□□□□□ -0.68
GPNMB-203ENST00000409458 U3KQE9 123 aa10.78□□□□□ -0.68
GPNMB-203ENST00000409458 HIVEP2P31629 2446 aa10.78□□□□□ -0.68
GPNMB-203ENST00000409458 PGPEP1LA6NFU8 196 aa10.77□□□□□ -0.69
GPNMB-203ENST00000409458 PEX7O00628 323 aa10.77□□□□□ -0.69
GPNMB-203ENST00000409458 SLC25A5P05141 298 aaKnown RBP10.77□□□□□ -0.69
GPNMB-203ENST00000409458 CRYBA1P05813 215 aa10.77□□□□□ -0.69
GPNMB-203ENST00000409458 ADIRFQ15847 76 aa10.77□□□□□ -0.69
GPNMB-203ENST00000409458 SIGLEC15Q6ZMC9 328 aa10.77□□□□□ -0.69
GPNMB-203ENST00000409458 EXOC3-AS1Q8N2X6 119 aa10.77□□□□□ -0.69
GPNMB-203ENST00000409458 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.77□□□□□ -0.69
GPNMB-203ENST00000409458 OTORQ9NRC9 128 aa10.77□□□□□ -0.69
GPNMB-203ENST00000409458 TCTEX1D4Q5JR98 221 aa10.76□□□□□ -0.69
GPNMB-203ENST00000409458 TCEAL7Q9BRU2 100 aa10.76□□□□□ -0.69
GPNMB-203ENST00000409458 RPH3ALQ9UNE2 315 aa10.76□□□□□ -0.69
GPNMB-203ENST00000409458 MTORP42345 2549 aa10.76□□□□□ -0.69
GPNMB-203ENST00000409458 ATF4P18848 351 aaPredicted RBP10.76□□□□□ -0.69
GPNMB-203ENST00000409458 PDE6HQ13956 83 aa10.76□□□□□ -0.69
GPNMB-203ENST00000409458 C1orf194Q5T5A4 169 aa10.76□□□□□ -0.69
GPNMB-203ENST00000409458 C18orf65Q6ZTR6 163 aa10.76□□□□□ -0.69
GPNMB-203ENST00000409458 LINC01551Q86U37 167 aa10.76□□□□□ -0.69
GPNMB-203ENST00000409458 C5orf17Q8NAS9 161 aa10.76□□□□□ -0.69
GPNMB-203ENST00000409458 WIPF2Q8TF74 440 aaPredicted RBP10.76□□□□□ -0.69
GPNMB-203ENST00000409458 LINC00479Q96M42 142 aa10.76□□□□□ -0.69
GPNMB-203ENST00000409458 AURKAIP1Q9NWT8 199 aaPredicted RBP10.76□□□□□ -0.69
GPNMB-203ENST00000409458 EPDR1Q9UM22 224 aa10.76□□□□□ -0.69
GPNMB-203ENST00000409458 IGHV4OR15-8A0A075B7B6 117 aa10.75□□□□□ -0.69
GPNMB-203ENST00000409458 A0A087WW49 117 aa10.75□□□□□ -0.69
GPNMB-203ENST00000409458 ZNF320A2RRD8 509 aa10.75□□□□□ -0.69
GPNMB-203ENST00000409458 C9JCJ5 164 aa10.75□□□□□ -0.69
GPNMB-203ENST00000409458 CENPWQ5EE01 88 aa10.75□□□□□ -0.69
GPNMB-203ENST00000409458 HIST1H2BAQ96A08 127 aa10.75□□□□□ -0.69
GPNMB-203ENST00000409458 GPR82Q96P67 336 aa10.75□□□□□ -0.69
GPNMB-203ENST00000409458 C16orf95Q9H693 158 aa10.75□□□□□ -0.69
GPNMB-203ENST00000409458 A0A087X0K7 114 aa10.74□□□□□ -0.69
GPNMB-203ENST00000409458 HELTA6NFD8 242 aa10.74□□□□□ -0.69
GPNMB-203ENST00000409458 B4DEV8 164 aa10.74□□□□□ -0.69
GPNMB-203ENST00000409458 RPEL1Q2QD12 228 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms