RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 HYDINQ4G0P3 5121 aa6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 A0A0J9YX75 114 aa6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 FAM240BA0A1B0GVZ2 78 aa6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 ZNF705FA8MVS1 300 aaPredicted RBP6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 IGLL5B9A064 214 aa6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 GOSR2O14653 212 aa6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 HBE1P02100 147 aa6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 METTL15P1P0C7V9 234 aa6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 ZNF705DP0CH99 300 aaPredicted RBP6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 ZNF705BP0CI00 300 aaPredicted RBP6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 SPART-AS1P0CW21 52 aa6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 RBMY1A1P0DJD3 496 aaKnown RBP6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 RBMY1CP0DJD4 496 aa6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 CXCL2P19875 107 aa6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 B2MP61769 119 aa6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 RBMY1FQ15415 496 aaKnown RBP6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 LRRC20Q8TCA0 184 aa6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 ZNF431Q8TF32 576 aaPredicted RBP6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 TMEM208Q9BTX3 173 aa6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 RNF126Q9BV68 326 aa6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 SLC25A39Q9BZJ4 359 aaPredicted RBP6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 RCL1Q9Y2P8 373 aaKnown RBP6.57□□□□□ -1.36
SNORD88A-201ENST00000408314 TRAV6A0A075B6T7 132 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 ELOA3CA0A087WX78 387 aaPredicted RBP6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 A0A087X0K7 114 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 C5orf51A6NDU8 294 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 PMS2P5A8MQ11 134 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 FAM25EA8MYX2 175 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 DEDDO75618 318 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 INSP01308 110 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 IGKV3-20P01619 116 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 GATA2P23769 480 aaPredicted RBP6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 BCAP31P51572 246 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 CAV2P51636 162 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 RRAS2P62070 204 aaPredicted RBP6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 HBG1P69891 147 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 HBG2P69892 147 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 FGL1Q08830 312 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 FAM78BQ5VT40 261 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 LCN15Q6UWW0 184 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 STX12Q86Y82 276 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 C12orf45Q8N5I9 185 aaPredicted RBP6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 SCRT1Q9BWW7 348 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 ARL6Q9H0F7 186 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 GPN1Q9HCN4 374 aaPredicted RBP6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 PPP1R14DQ9NXH3 145 aa6.56□□□□□ -1.36
SNORD88A-201ENST00000408314 IGHV3OR16-12A0A075B7B8 117 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 DEFB131BA0A096LNP1 70 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 C7orf66A4D0T2 115 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 A8MTW9 85 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 PLA2G10O15496 165 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 COX7A2P2O60397 106 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 MBPP02686 304 aaPredicted RBP6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 H2AFB2P0C5Z0 115 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 SLC38A11Q08AI6 406 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 RRN3P1Q2M238 152 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 GDF5OSQ5U4N7 250 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 GSG1LQ6UXU4 331 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 Q6ZRG5 221 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 Q6ZTC4 211 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 BPIFA4PQ86YQ2 179 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 ZNF738Q8NE65 137 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 ENKURQ8TC29 256 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 FAM210BQ96KR6 192 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 C2orf50Q96LR7 162 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 IGF2BP2-AS1Q96M15 143 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 PFDN5Q99471 154 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 SLC50A1Q9BRV3 221 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 NDUFAF3Q9BU61 184 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 ARV1Q9H2C2 271 aa6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 LSM5Q9Y4Y9 91 aaKnown RBP6.55□□□□□ -1.36
SNORD88A-201ENST00000408314 EPPK1P58107 5090 aaKnown RBP6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 IGHV4-4A0A075B6R2 117 aa6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 AGPAT2O15120 278 aa6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 P0DMU3 169 aa6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 FAM231AP0DMU4 169 aa6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 FAM231CP0DMU5 169 aa6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 CAMLGP49069 296 aa6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 CNN1P51911 297 aaKnown RBP6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 FXYD7P58549 80 aa6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 S100A10P60903 97 aa6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 ASAH1Q13510 395 aa6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 OXA1LQ15070 435 aa6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 TMEM182Q6ZP80 229 aaPredicted RBP6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 TMEM256Q8N2U0 113 aa6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 ZNF709Q8N972 641 aa6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 OR1L4Q8NGR5 311 aa6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 SLC35B3Q9H1N7 401 aa6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 UQCC1Q9NVA1 299 aa6.54□□□□□ -1.36
SNORD88A-201ENST00000408314 LOC102723971A0A1B0GUV8 181 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 F6UB75 175 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 BOLA2-SMG1P6H3BVE0 249 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 CCSO14618 274 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 PRAF2O60831 178 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 MPDU1O75352 247 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 CCNKO75909 580 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 RLN2P04090 185 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 S100A11P31949 105 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 SULT1A1P50225 295 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms