RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 ARV1Q9H2C2 271 aa13.29□□□□□ -0.28
THUMPD2-202ENST00000403537 SLC25A32Q9H2D1 315 aa13.29□□□□□ -0.28
THUMPD2-202ENST00000403537 MS4A6AQ9H2W1 248 aa13.29□□□□□ -0.28
THUMPD2-202ENST00000403537 SLC25A22Q9H936 323 aa13.29□□□□□ -0.28
THUMPD2-202ENST00000403537 SLC39A9Q9NUM3 307 aa13.29□□□□□ -0.28
THUMPD2-202ENST00000403537 HIGD1AQ9Y241 93 aa13.29□□□□□ -0.28
THUMPD2-202ENST00000403537 ZNF98A6NK75 572 aa13.28□□□□□ -0.28
THUMPD2-202ENST00000403537 APOC4P55056 127 aa13.28□□□□□ -0.28
THUMPD2-202ENST00000403537 PAFAH1B2P68402 229 aa13.28□□□□□ -0.28
THUMPD2-202ENST00000403537 STXBP6Q8NFX7 210 aa13.28□□□□□ -0.28
THUMPD2-202ENST00000403537 SHANK2-AS3Q9BTD1 123 aa13.28□□□□□ -0.28
THUMPD2-202ENST00000403537 UBQLN2Q9UHD9 624 aa13.28□□□□□ -0.28
THUMPD2-202ENST00000403537 COX7A2P2O60397 106 aa13.27□□□□□ -0.29
THUMPD2-202ENST00000403537 MPDU1O75352 247 aa13.27□□□□□ -0.29
THUMPD2-202ENST00000403537 SIGLEC15Q6ZMC9 328 aa13.27□□□□□ -0.29
THUMPD2-202ENST00000403537 UBE2CO00762 179 aa13.26□□□□□ -0.29
THUMPD2-202ENST00000403537 IFNA5P01569 189 aa13.26□□□□□ -0.29
THUMPD2-202ENST00000403537 ODF3L2Q3SX64 289 aa13.26□□□□□ -0.29
THUMPD2-202ENST00000403537 RPL7L1Q6DKI1 246 aaKnown RBP13.26□□□□□ -0.29
THUMPD2-202ENST00000403537 TCTE3Q8IZS6 198 aa13.26□□□□□ -0.29
THUMPD2-202ENST00000403537 C17orf77Q96MU5 243 aa13.26□□□□□ -0.29
THUMPD2-202ENST00000403537 MFFQ9GZY8 342 aa13.26□□□□□ -0.29
THUMPD2-202ENST00000403537 KMT2CQ8NEZ4 4911 aaKnown RBP13.26□□□□□ -0.29
THUMPD2-202ENST00000403537 KIR2DL5BA0A0G2JN68 375 aa13.25□□□□□ -0.29
THUMPD2-202ENST00000403537 KIR2DL5BA0A0G2JPC4 375 aa13.25□□□□□ -0.29
THUMPD2-202ENST00000403537 CXCL2P19875 107 aa13.25□□□□□ -0.29
THUMPD2-202ENST00000403537 ZNF124Q15973 351 aa13.25□□□□□ -0.29
THUMPD2-202ENST00000403537 C10orf113Q5VZT2 155 aa13.25□□□□□ -0.29
THUMPD2-202ENST00000403537 LINC00305Q7Z4B0 112 aa13.25□□□□□ -0.29
THUMPD2-202ENST00000403537 AKAP14Q86UN6 197 aa13.25□□□□□ -0.29
THUMPD2-202ENST00000403537 OR8I2Q8N0Y5 310 aa13.25□□□□□ -0.29
THUMPD2-202ENST00000403537 KIR2DL5AQ8N109 375 aa13.25□□□□□ -0.29
THUMPD2-202ENST00000403537 HSD17B11Q8NBQ5 300 aa13.25□□□□□ -0.29
THUMPD2-202ENST00000403537 KIR2DL5BQ8NHK3 375 aa13.25□□□□□ -0.29
THUMPD2-202ENST00000403537 SCGB1C1Q8TD33 95 aa13.25□□□□□ -0.29
THUMPD2-202ENST00000403537 DCANP1Q8TF63 244 aa13.25□□□□□ -0.29
THUMPD2-202ENST00000403537 TRAV5A0A0B4J249 113 aa13.24□□□□□ -0.29
THUMPD2-202ENST00000403537 HELTA6NFD8 242 aa13.24□□□□□ -0.29
THUMPD2-202ENST00000403537 K7EQG2 157 aa13.24□□□□□ -0.29
THUMPD2-202ENST00000403537 C1orf194Q5T5A4 169 aa13.24□□□□□ -0.29
THUMPD2-202ENST00000403537 PXDC1Q5TGL8 231 aa13.24□□□□□ -0.29
THUMPD2-202ENST00000403537 SPATA31B1PQ5VZV4 182 aa13.24□□□□□ -0.29
THUMPD2-202ENST00000403537 Q6ZRG5 221 aa13.24□□□□□ -0.29
THUMPD2-202ENST00000403537 ZNF709Q8N972 641 aa13.24□□□□□ -0.29
THUMPD2-202ENST00000403537 PARD6GQ9BYG4 376 aaPredicted RBP13.24□□□□□ -0.29
THUMPD2-202ENST00000403537 SH3BGRL3Q9H299 93 aa13.24□□□□□ -0.29
THUMPD2-202ENST00000403537 RETNQ9HD89 108 aa13.24□□□□□ -0.29
THUMPD2-202ENST00000403537 DNAJC4Q9NNZ3 241 aa13.24□□□□□ -0.29
THUMPD2-202ENST00000403537 TP53TG1Q9Y2A0 90 aa13.24□□□□□ -0.29
THUMPD2-202ENST00000403537 DNAH7Q8WXX0 4024 aa13.23□□□□□ -0.29
THUMPD2-202ENST00000403537 TRAV2A0A0B4J234 112 aa13.23□□□□□ -0.29
THUMPD2-202ENST00000403537 DNASE2O00115 360 aaPredicted RBP13.23□□□□□ -0.29
THUMPD2-202ENST00000403537 SNRPCP09234 159 aaKnown RBP13.23□□□□□ -0.29
THUMPD2-202ENST00000403537 FFAR4Q5NUL3 377 aa13.23□□□□□ -0.29
THUMPD2-202ENST00000403537 Q6ZWC4 215 aa13.23□□□□□ -0.29
THUMPD2-202ENST00000403537 MAP6D1Q9H9H5 199 aa13.23□□□□□ -0.29
THUMPD2-202ENST00000403537 CYTL1Q9NRR1 136 aa13.23□□□□□ -0.29
THUMPD2-202ENST00000403537 PFDN2Q9UHV9 154 aa13.23□□□□□ -0.29
THUMPD2-202ENST00000403537 ELOA3CA0A087WX78 387 aaPredicted RBP13.22□□□□□ -0.29
THUMPD2-202ENST00000403537 HMSDA8MTL9 139 aa13.22□□□□□ -0.29
THUMPD2-202ENST00000403537 C17orf112F2Z3M2 114 aa13.22□□□□□ -0.29
THUMPD2-202ENST00000403537 EIF3GO75821 320 aaKnown RBP eCLIP13.22□□□□□ -0.29
THUMPD2-202ENST00000403537 ZNF266Q14584 549 aa13.22□□□□□ -0.29
THUMPD2-202ENST00000403537 APRG1Q8IVJ8 170 aa13.22□□□□□ -0.29
THUMPD2-202ENST00000403537 KCNRGQ8N5I3 272 aa13.22□□□□□ -0.29
THUMPD2-202ENST00000403537 NRN1Q9NPD7 142 aa13.22□□□□□ -0.29
THUMPD2-202ENST00000403537 MRPS12O15235 138 aaKnown RBP13.21□□□□□ -0.29
THUMPD2-202ENST00000403537 ZNF688P0C7X2 276 aa13.21□□□□□ -0.29
THUMPD2-202ENST00000403537 ATP6V0CP27449 155 aa13.21□□□□□ -0.29
THUMPD2-202ENST00000403537 ZNF345Q14585 488 aa13.21□□□□□ -0.29
THUMPD2-202ENST00000403537 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.21□□□□□ -0.29
THUMPD2-202ENST00000403537 OR1L4Q8NGR5 311 aa13.21□□□□□ -0.29
THUMPD2-202ENST00000403537 PFDN5Q99471 154 aa13.21□□□□□ -0.29
THUMPD2-202ENST00000403537 SEPSECSQ9HD40 501 aaKnown RBP13.21□□□□□ -0.29
THUMPD2-202ENST00000403537 KCNIP2Q9NS61 270 aa13.21□□□□□ -0.29
THUMPD2-202ENST00000403537 H3BTX0 84 aa13.2□□□□□ -0.3
THUMPD2-202ENST00000403537 SOCS3O14543 225 aa13.2□□□□□ -0.3
THUMPD2-202ENST00000403537 C1QBP02746 253 aa13.2□□□□□ -0.3
THUMPD2-202ENST00000403537 RAB2AP61019 212 aa13.2□□□□□ -0.3
THUMPD2-202ENST00000403537 FAM78BQ5VT40 261 aa13.2□□□□□ -0.3
THUMPD2-202ENST00000403537 ZFAND6Q6FIF0 208 aa13.2□□□□□ -0.3
THUMPD2-202ENST00000403537 MIR17HGQ75NE6 70 aa13.2□□□□□ -0.3
THUMPD2-202ENST00000403537 GATAD1Q8WUU5 269 aa13.2□□□□□ -0.3
THUMPD2-202ENST00000403537 OVOL2Q9BRP0 275 aa13.2□□□□□ -0.3
THUMPD2-202ENST00000403537 GALR1P47211 349 aa13.19□□□□□ -0.3
THUMPD2-202ENST00000403537 DEFB131AP59861 70 aa13.19□□□□□ -0.3
THUMPD2-202ENST00000403537 DEFB1P60022 68 aa13.19□□□□□ -0.3
THUMPD2-202ENST00000403537 IGFL4Q6B9Z1 124 aa13.19□□□□□ -0.3
THUMPD2-202ENST00000403537 TIMM9Q9Y5J7 89 aa13.19□□□□□ -0.3
THUMPD2-202ENST00000403537 SPRY2O43597 315 aa13.18□□□□□ -0.3
THUMPD2-202ENST00000403537 PRB4P10163 310 aaPredicted RBP13.18□□□□□ -0.3
THUMPD2-202ENST00000403537 RPL7P18124 248 aaKnown RBP13.18□□□□□ -0.3
THUMPD2-202ENST00000403537 FAM167A-AS1Q96KT0 104 aa13.18□□□□□ -0.3
THUMPD2-202ENST00000403537 ARPC5LQ9BPX5 153 aa13.18□□□□□ -0.3
THUMPD2-202ENST00000403537 SLC25A2Q9BXI2 301 aa13.18□□□□□ -0.3
THUMPD2-202ENST00000403537 BORCS7-ASMTA0A0B4J1R7 106 aa13.17□□□□□ -0.3
THUMPD2-202ENST00000403537 H3BQ15 152 aa13.17□□□□□ -0.3
THUMPD2-202ENST00000403537 BCL2L11O43521 198 aa13.17□□□□□ -0.3
THUMPD2-202ENST00000403537 PYYP10082 97 aa13.17□□□□□ -0.3
THUMPD2-202ENST00000403537 ATF4P18848 351 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms