RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 SLC25A32Q9H2D1 315 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 FBXL17Q9UF56 701 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 PFDN2Q9UHV9 154 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 LSM5Q9Y4Y9 91 aaKnown RBP4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 FAM240BA0A1B0GVZ2 78 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 C7orf66A4D0T2 115 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 FAM24AA6NFZ4 105 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 ZNF98A6NK75 572 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 H3BMM0 161 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 H3BRN7 92 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 K7EPK0 472 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 L7N2F9 121 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 JTBO76095 146 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 IL5P05113 134 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 OR5G3P0C626 314 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 LINC00869P0C866 280 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 RBMY1A1P0DJD3 496 aaKnown RBP4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 RBMY1CP0DJD4 496 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 SPP1P10451 314 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 HLA-DRB4P13762 266 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 ID1P41134 155 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 BCAP31P51572 246 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 VAMP2P63027 116 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 DLK1P80370 383 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 IFITM3Q01628 133 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 SLC38A11Q08AI6 406 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 ASAH1Q13510 395 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 RBMY1FQ15415 496 aaKnown RBP4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 C1orf194Q5T5A4 169 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 MORN3Q6PF18 240 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 CEMP1Q6PRD7 247 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 TMEM217Q8N7C4 229 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 Q8NAQ8 132 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 CSNK1G2-AS1Q8NCQ2 148 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 OR10P1Q8NGE3 313 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 PHLDA1Q8WV24 401 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 S100ZQ8WXG8 99 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 UHRF2Q96PU4 802 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 RSG1Q9BU20 258 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 TMEM147Q9BVK8 224 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 C11orf68Q9H3H3 251 aaKnown RBP4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 XCL2Q9UBD3 114 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 MGAT4CQ9UBM8 478 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 HLA-DRB4X5D2U9 266 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 X6R8D5 127 aa4.18□□□□□ -1.74
HMGB1P20-201ENST00000402555 EPPK1P58107 5090 aaKnown RBP4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 TRAV8-2A0A0B4J237 113 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 NUPR2A6NF83 97 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 ZNF705EA8MWA4 302 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 TSC22D2O75157 780 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 HYPMO75409 117 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 UPK1BO75841 260 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 CST7O76096 145 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 SIX6O95475 246 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 CFDP00746 253 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 SNRPCP09234 159 aaKnown RBP4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 ZNF705DP0CH99 300 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 ZNF705BP0CI00 300 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 GALR1P47211 349 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 PSMB3P49720 205 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 CAV2P51636 162 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 TAS2R30P59541 319 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 S100A10P60903 97 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 RAP2BP61225 183 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 FGL1Q08830 312 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 KIR3DS1Q14943 382 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 MZT2BQ6NZ67 158 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 PATE2Q6UY27 113 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 FOXI2Q6ZQN5 318 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 LINC00299Q6ZSB3 139 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 ZNF767PQ75MW2 155 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 RNF182Q8N6D2 247 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 OR4B1Q8NGF8 309 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 C11orf45Q8TAV5 145 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 ENKURQ8TC29 256 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 LINC00476Q8WZB0 136 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 C16orf92Q96LL3 132 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 C2orf50Q96LR7 162 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 SHANK2-AS3Q9BTD1 123 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 SLC25A39Q9BZJ4 359 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 ARL6Q9H0F7 186 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 SLC35B3Q9H1N7 401 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 SAV1Q9H4B6 383 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 C11orf1Q9H5F2 150 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 NPVFQ9HCQ7 196 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 SEPSECSQ9HD40 501 aaKnown RBP4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 PTTG2Q9NZH5 202 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 SLC45A2Q9UMX9 530 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 HIGD1AQ9Y241 93 aa4.17□□□□□ -1.74
HMGB1P20-201ENST00000402555 IGHV3OR16-12A0A075B7B8 117 aa4.16□□□□□ -1.74
HMGB1P20-201ENST00000402555 A0A0J9YX75 114 aa4.16□□□□□ -1.74
HMGB1P20-201ENST00000402555 IGSF23A1L1A6 192 aa4.16□□□□□ -1.74
HMGB1P20-201ENST00000402555 H3BTX0 84 aa4.16□□□□□ -1.74
HMGB1P20-201ENST00000402555 ISLRO14498 428 aa4.16□□□□□ -1.74
HMGB1P20-201ENST00000402555 GOSR2O14653 212 aa4.16□□□□□ -1.74
HMGB1P20-201ENST00000402555 AGPAT2O15120 278 aa4.16□□□□□ -1.74
HMGB1P20-201ENST00000402555 DEDDO75618 318 aa4.16□□□□□ -1.74
HMGB1P20-201ENST00000402555 LY6G6CO95867 125 aa4.16□□□□□ -1.74
HMGB1P20-201ENST00000402555 HLA-DMBP28068 263 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms