RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 CHEK1O14757 476 aa11.3□□□□□ -0.6
ATG3-202ENST00000402314 GPR183P32249 361 aa11.3□□□□□ -0.6
ATG3-202ENST00000402314 ZNF329Q86UD4 541 aa11.3□□□□□ -0.6
ATG3-202ENST00000402314 OR8A1Q8NGG7 326 aa11.3□□□□□ -0.6
ATG3-202ENST00000402314 TMEM191AQ9H0A3 160 aa11.3□□□□□ -0.6
ATG3-202ENST00000402314 DYNLRB1Q9NP97 96 aa11.3□□□□□ -0.6
ATG3-202ENST00000402314 ZNF835Q9Y2P0 537 aa11.3□□□□□ -0.6
ATG3-202ENST00000402314 FAM87AP0C7U9 286 aa11.29□□□□□ -0.6
ATG3-202ENST00000402314 HCP5Q6MZN7 132 aa11.29□□□□□ -0.6
ATG3-202ENST00000402314 ST20Q9HBF5 79 aa11.29□□□□□ -0.6
ATG3-202ENST00000402314 E7EQL1 145 aa11.29□□□□□ -0.6
ATG3-202ENST00000402314 FAM106CPP0CH98 169 aa11.29□□□□□ -0.6
ATG3-202ENST00000402314 HBBP68871 147 aa11.29□□□□□ -0.6
ATG3-202ENST00000402314 FAM106AQ4KMX7 169 aa11.29□□□□□ -0.6
ATG3-202ENST00000402314 C12orf54Q6X4T0 127 aa11.29□□□□□ -0.6
ATG3-202ENST00000402314 OR1B1Q8NGR6 318 aa11.29□□□□□ -0.6
ATG3-202ENST00000402314 RNASE6Q93091 150 aaKnown RBP11.29□□□□□ -0.6
ATG3-202ENST00000402314 AP1S3Q96PC3 154 aa11.29□□□□□ -0.6
ATG3-202ENST00000402314 ZNF430Q9H8G1 570 aaPredicted RBP11.29□□□□□ -0.6
ATG3-202ENST00000402314 RALYQ9UKM9 306 aaKnown RBP11.29□□□□□ -0.6
ATG3-202ENST00000402314 K7EMI3 77 aa11.28□□□□□ -0.6
ATG3-202ENST00000402314 NDUFB3O43676 98 aa11.28□□□□□ -0.6
ATG3-202ENST00000402314 TMEM11P17152 192 aa11.28□□□□□ -0.6
ATG3-202ENST00000402314 CNTFRP26992 372 aa11.28□□□□□ -0.6
ATG3-202ENST00000402314 C10orf113Q5VZT2 155 aa11.28□□□□□ -0.6
ATG3-202ENST00000402314 PATE2Q6UY27 113 aa11.28□□□□□ -0.6
ATG3-202ENST00000402314 MAP1LC3CQ9BXW4 147 aa11.28□□□□□ -0.6
ATG3-202ENST00000402314 NDUFA4L2Q9NRX3 87 aa11.28□□□□□ -0.6
ATG3-202ENST00000402314 ZNF257Q9Y2Q1 563 aa11.28□□□□□ -0.6
ATG3-202ENST00000402314 HIST1H1EP10412 219 aaKnown RBP11.28□□□□□ -0.6
ATG3-202ENST00000402314 HTR1DP28221 377 aa11.28□□□□□ -0.6
ATG3-202ENST00000402314 LOXP28300 417 aaPredicted RBP11.28□□□□□ -0.6
ATG3-202ENST00000402314 CD69Q07108 199 aa11.28□□□□□ -0.6
ATG3-202ENST00000402314 F11RQ9Y624 299 aaKnown RBP11.28□□□□□ -0.6
ATG3-202ENST00000402314 HRNRQ86YZ3 2850 aaPredicted RBP11.28□□□□□ -0.6
ATG3-202ENST00000402314 GRNP28799 593 aaKnown RBP11.27□□□□□ -0.6
ATG3-202ENST00000402314 LINC00305Q7Z4B0 112 aa11.27□□□□□ -0.6
ATG3-202ENST00000402314 CIARTQ8N365 385 aaPredicted RBP11.27□□□□□ -0.6
ATG3-202ENST00000402314 OR5AN1Q8NGI8 311 aa11.27□□□□□ -0.6
ATG3-202ENST00000402314 LINC01560Q8TB33 94 aa11.27□□□□□ -0.6
ATG3-202ENST00000402314 JMJD8Q96S16 334 aa11.27□□□□□ -0.6
ATG3-202ENST00000402314 SCRT2Q9NQ03 307 aa11.27□□□□□ -0.6
ATG3-202ENST00000402314 MAP1AP78559 2803 aaPredicted RBP11.27□□□□□ -0.61
ATG3-202ENST00000402314 LY6HO94772 140 aa11.27□□□□□ -0.61
ATG3-202ENST00000402314 KLF5Q13887 457 aaPredicted RBP11.27□□□□□ -0.61
ATG3-202ENST00000402314 C2orf83Q53S99 150 aa11.27□□□□□ -0.61
ATG3-202ENST00000402314 P01737 135 aa11.27□□□□□ -0.61
ATG3-202ENST00000402314 BPIFA4PQ86YQ2 179 aa11.27□□□□□ -0.61
ATG3-202ENST00000402314 OR1L8Q8NGR8 309 aa11.27□□□□□ -0.61
ATG3-202ENST00000402314 SHISA9B4DS77 424 aa11.26□□□□□ -0.61
ATG3-202ENST00000402314 GNG7O60262 68 aa11.26□□□□□ -0.61
ATG3-202ENST00000402314 FER1L6-AS1Q8NA97 138 aa11.26□□□□□ -0.61
ATG3-202ENST00000402314 OR1N2Q8NGR9 330 aa11.26□□□□□ -0.61
ATG3-202ENST00000402314 OSR1Q8TAX0 266 aaPredicted RBP11.26□□□□□ -0.61
ATG3-202ENST00000402314 DAZAP1Q96EP5 407 aaKnown RBP11.26□□□□□ -0.61
ATG3-202ENST00000402314 IGLC1P0CG04 106 aa11.25□□□□□ -0.61
ATG3-202ENST00000402314 RPL24P83731 157 aaKnown RBP11.25□□□□□ -0.61
ATG3-202ENST00000402314 ERHP84090 104 aaKnown RBP11.25□□□□□ -0.61
ATG3-202ENST00000402314 ASCL5Q7RTU5 278 aa11.25□□□□□ -0.61
ATG3-202ENST00000402314 PEF1Q9UBV8 284 aaKnown RBP11.25□□□□□ -0.61
ATG3-202ENST00000402314 TMSB15BA0A087X1C1 80 aa11.25□□□□□ -0.61
ATG3-202ENST00000402314 IGLV2-23P01705 113 aa11.25□□□□□ -0.61
ATG3-202ENST00000402314 APOHP02749 345 aaPredicted RBP11.25□□□□□ -0.61
ATG3-202ENST00000402314 MEF2CQ06413 473 aaPredicted RBP11.25□□□□□ -0.61
ATG3-202ENST00000402314 LOXL1Q08397 574 aaPredicted RBP11.25□□□□□ -0.61
ATG3-202ENST00000402314 Q5PR19 223 aa11.25□□□□□ -0.61
ATG3-202ENST00000402314 PDPNQ86YL7 162 aa11.25□□□□□ -0.61
ATG3-202ENST00000402314 OR4C13Q8NGP0 309 aa11.25□□□□□ -0.61
ATG3-202ENST00000402314 A0A1W2PPI3 338 aa11.25□□□□□ -0.61
ATG3-202ENST00000402314 CD5LO43866 347 aa11.25□□□□□ -0.61
ATG3-202ENST00000402314 WIPF2Q8TF74 440 aaPredicted RBP11.25□□□□□ -0.61
ATG3-202ENST00000402314 RPP21Q9H633 154 aaKnown RBP11.25□□□□□ -0.61
ATG3-202ENST00000402314 OR2J3O76001 311 aa11.24□□□□□ -0.61
ATG3-202ENST00000402314 HLA-DRB1P01911 266 aa11.24□□□□□ -0.61
ATG3-202ENST00000402314 COX7A1P24310 79 aa11.24□□□□□ -0.61
ATG3-202ENST00000402314 C2orf91Q6ZV80 131 aa11.24□□□□□ -0.61
ATG3-202ENST00000402314 PRNTQ86SH4 94 aa11.24□□□□□ -0.61
ATG3-202ENST00000402314 THYN1Q9P016 225 aa11.24□□□□□ -0.61
ATG3-202ENST00000402314 EPDR1Q9UM22 224 aa11.24□□□□□ -0.61
ATG3-202ENST00000402314 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.24□□□□□ -0.61
ATG3-202ENST00000402314 DLL1O00548 723 aa11.24□□□□□ -0.61
ATG3-202ENST00000402314 COL8A1P27658 744 aa11.24□□□□□ -0.61
ATG3-202ENST00000402314 NHLH1Q02575 133 aa11.24□□□□□ -0.61
ATG3-202ENST00000402314 TMEM97Q5BJF2 176 aa11.24□□□□□ -0.61
ATG3-202ENST00000402314 FAM71F2Q6NXP2 309 aa11.24□□□□□ -0.61
ATG3-202ENST00000402314 FXYD5Q96DB9 178 aa11.24□□□□□ -0.61
ATG3-202ENST00000402314 SCNM1Q9BWG6 230 aa11.24□□□□□ -0.61
ATG3-202ENST00000402314 SERTM2A0A1B0GWG4 89 aa11.23□□□□□ -0.61
ATG3-202ENST00000402314 A0A1B0GXF2 115 aa11.23□□□□□ -0.61
ATG3-202ENST00000402314 FAM90A27PA6NNH2 459 aa11.23□□□□□ -0.61
ATG3-202ENST00000402314 TNFRSF13BO14836 293 aaPredicted RBP11.23□□□□□ -0.61
ATG3-202ENST00000402314 OR5AL1P0C617 328 aa11.23□□□□□ -0.61
ATG3-202ENST00000402314 HIST1H1AQ02539 215 aaPredicted RBP11.23□□□□□ -0.61
ATG3-202ENST00000402314 RABAC1Q9UI14 185 aa11.23□□□□□ -0.61
ATG3-202ENST00000402314 IGKV1D-37A0A075B6S9 117 aa11.23□□□□□ -0.61
ATG3-202ENST00000402314 IGHV1-8P0DP01 117 aa11.23□□□□□ -0.61
ATG3-202ENST00000402314 EXOC3-AS1Q8N2X6 119 aa11.23□□□□□ -0.61
ATG3-202ENST00000402314 PRSS3P2Q8NHM4 247 aa11.23□□□□□ -0.61
ATG3-202ENST00000402314 TMEM167AQ8TBQ9 72 aa11.23□□□□□ -0.61
ATG3-202ENST00000402314 TTTY13Q9BZ97 58 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms