RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 STX12Q86Y82 276 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 OR4B1Q8NGF8 309 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 RSG1Q9BU20 258 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 NPVFQ9HCQ7 196 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 SLC45A2Q9UMX9 530 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 IGSF23A1L1A6 192 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 NUPR2A6NF83 97 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 F6UB75 175 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 INMT-MINDY4F8WBC2 141 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 ISLRO14498 428 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 SOCS3O14543 225 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 AGPAT2O15120 278 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 SSNA1O43805 119 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 COX7A2P2O60397 106 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 PRAF2O60831 178 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 HYPMO75409 117 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 HLA-DRB4P13762 266 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 NUTF2P61970 127 aaKnown RBP6.14□□□□□ -1.43
USP16-202ENST00000399973 BAXQ07812 192 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 TMEM41BQ5BJD5 291 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 SAMD13Q5VXD3 122 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 EBLN2Q6P2I7 272 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 GPR82Q96P67 336 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 MGST2Q99735 147 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 SHANK2-AS3Q9BTD1 123 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 C1QTNF4Q9BXJ3 329 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 SLC25A39Q9BZJ4 359 aaPredicted RBP6.14□□□□□ -1.43
USP16-202ENST00000399973 C11orf68Q9H3H3 251 aaKnown RBP6.14□□□□□ -1.43
USP16-202ENST00000399973 SEPSECSQ9HD40 501 aaKnown RBP6.14□□□□□ -1.43
USP16-202ENST00000399973 RPRMQ9NS64 109 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 LYRM2Q9NU23 88 aaPredicted RBP6.14□□□□□ -1.43
USP16-202ENST00000399973 XCL2Q9UBD3 114 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 HLA-DRB4X5D2U9 266 aa6.14□□□□□ -1.43
USP16-202ENST00000399973 ALMS1Q8TCU4 4167 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 IGHV3OR16-12A0A075B7B8 117 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 IGHV4-28A0A0C4DH34 117 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 FNDC10F2Z333 226 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 H3BMM0 161 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 DEDDO75618 318 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 GIG44P09565 113 aaPredicted RBP6.13□□□□□ -1.43
USP16-202ENST00000399973 RPL7P18124 248 aaKnown RBP6.13□□□□□ -1.43
USP16-202ENST00000399973 CAMLGP49069 296 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 SULT1A1P50225 295 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 NANOS2P60321 138 aaKnown RBP6.13□□□□□ -1.43
USP16-202ENST00000399973 HBG1P69891 147 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 HBG2P69892 147 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 IGFL4Q6B9Z1 124 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 FOXI2Q6ZQN5 318 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 S100A7AQ86SG5 101 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 RNF182Q8N6D2 247 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 ZNF738Q8NE65 137 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 C11orf45Q8TAV5 145 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 GGACTQ9BVM4 153 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 ARV1Q9H2C2 271 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 SAV1Q9H4B6 383 aaPredicted RBP6.13□□□□□ -1.43
USP16-202ENST00000399973 C11orf1Q9H5F2 150 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 UQCC1Q9NVA1 299 aa6.13□□□□□ -1.43
USP16-202ENST00000399973 SNRPCP09234 159 aaKnown RBP6.12□□□□□ -1.43
USP16-202ENST00000399973 PRB4P10163 310 aaPredicted RBP6.12□□□□□ -1.43
USP16-202ENST00000399973 FGF7P21781 194 aa6.12□□□□□ -1.43
USP16-202ENST00000399973 RAB31Q13636 194 aa6.12□□□□□ -1.43
USP16-202ENST00000399973 FAM78BQ5VT40 261 aa6.12□□□□□ -1.43
USP16-202ENST00000399973 LINC00305Q7Z4B0 112 aa6.12□□□□□ -1.43
USP16-202ENST00000399973 TMEM252Q8N6L7 170 aa6.12□□□□□ -1.43
USP16-202ENST00000399973 Q8NAQ8 132 aa6.12□□□□□ -1.43
USP16-202ENST00000399973 LRRC20Q8TCA0 184 aa6.12□□□□□ -1.43
USP16-202ENST00000399973 C20orf173Q96LM9 149 aa6.12□□□□□ -1.43
USP16-202ENST00000399973 MFFQ9GZY8 342 aa6.12□□□□□ -1.43
USP16-202ENST00000399973 SLC35B3Q9H1N7 401 aa6.12□□□□□ -1.43
USP16-202ENST00000399973 X6R8D5 127 aa6.12□□□□□ -1.43
USP16-202ENST00000399973 SACSQ9NZJ4 4579 aa6.11□□□□□ -1.43
USP16-202ENST00000399973 A0A0J9YX75 114 aa6.11□□□□□ -1.43
USP16-202ENST00000399973 H3BTX0 84 aa6.11□□□□□ -1.43
USP16-202ENST00000399973 RLN2P04090 185 aa6.11□□□□□ -1.43
USP16-202ENST00000399973 ZNF705DP0CH99 300 aaPredicted RBP6.11□□□□□ -1.43
USP16-202ENST00000399973 ZNF705BP0CI00 300 aaPredicted RBP6.11□□□□□ -1.43
USP16-202ENST00000399973 MIFP14174 115 aa6.11□□□□□ -1.43
USP16-202ENST00000399973 HLA-DMBP28068 263 aa6.11□□□□□ -1.43
USP16-202ENST00000399973 PLP1P60201 277 aa6.11□□□□□ -1.43
USP16-202ENST00000399973 PXDC1Q5TGL8 231 aa6.11□□□□□ -1.43
USP16-202ENST00000399973 C10orf113Q5VZT2 155 aa6.11□□□□□ -1.43
USP16-202ENST00000399973 MIC13Q5XKP0 118 aa6.11□□□□□ -1.43
USP16-202ENST00000399973 CEMP1Q6PRD7 247 aaPredicted RBP6.11□□□□□ -1.43
USP16-202ENST00000399973 PATE2Q6UY27 113 aa6.11□□□□□ -1.43
USP16-202ENST00000399973 PHLDA1Q8WV24 401 aaPredicted RBP6.11□□□□□ -1.43
USP16-202ENST00000399973 MARVELD1Q9BSK0 173 aa6.11□□□□□ -1.43
USP16-202ENST00000399973 OR5AC2Q9NZP5 309 aa6.11□□□□□ -1.43
USP16-202ENST00000399973 RNF24Q9Y225 148 aa6.11□□□□□ -1.43
USP16-202ENST00000399973 WDR83OSQ9Y284 106 aa6.11□□□□□ -1.43
USP16-202ENST00000399973 KLK5Q9Y337 293 aaPredicted RBP6.11□□□□□ -1.43
USP16-202ENST00000399973 TRAV8-2A0A0B4J237 113 aa6.1□□□□□ -1.43
USP16-202ENST00000399973 ZNF705EA8MWA4 302 aaPredicted RBP6.1□□□□□ -1.43
USP16-202ENST00000399973 E5RGE8 158 aa6.1□□□□□ -1.43
USP16-202ENST00000399973 RBMY1A1P0DJD3 496 aaKnown RBP6.1□□□□□ -1.43
USP16-202ENST00000399973 RBMY1CP0DJD4 496 aa6.1□□□□□ -1.43
USP16-202ENST00000399973 S100A11P31949 105 aa6.1□□□□□ -1.43
USP16-202ENST00000399973 CNN1P51911 297 aaKnown RBP6.1□□□□□ -1.43
USP16-202ENST00000399973 EMP1P54849 157 aa6.1□□□□□ -1.43
USP16-202ENST00000399973 PSG9Q00887 426 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms