RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 A0A0J9YWU9 116 aa10.3□□□□□ -0.76
HLA-DQB1-202ENST00000399079 E5RGE8 158 aa10.3□□□□□ -0.76
HLA-DQB1-202ENST00000399079 HBG1P69891 147 aa10.3□□□□□ -0.76
HLA-DQB1-202ENST00000399079 HBG2P69892 147 aa10.3□□□□□ -0.76
HLA-DQB1-202ENST00000399079 EWSR1Q01844 656 aaKnown RBP eCLIP10.3□□□□□ -0.76
HLA-DQB1-202ENST00000399079 BAXQ07812 192 aa10.3□□□□□ -0.76
HLA-DQB1-202ENST00000399079 MIC13Q5XKP0 118 aa10.3□□□□□ -0.76
HLA-DQB1-202ENST00000399079 IGFL4Q6B9Z1 124 aa10.3□□□□□ -0.76
HLA-DQB1-202ENST00000399079 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.3□□□□□ -0.76
HLA-DQB1-202ENST00000399079 TMEM37Q8WXS4 190 aa10.3□□□□□ -0.76
HLA-DQB1-202ENST00000399079 RNF126Q9BV68 326 aa10.3□□□□□ -0.76
HLA-DQB1-202ENST00000399079 STARD9Q9P2P6 4700 aa10.3□□□□□ -0.76
HLA-DQB1-202ENST00000399079 H3BMM0 161 aa10.29□□□□□ -0.76
HLA-DQB1-202ENST00000399079 ISLRO14498 428 aa10.29□□□□□ -0.76
HLA-DQB1-202ENST00000399079 MPC2O95563 127 aa10.29□□□□□ -0.76
HLA-DQB1-202ENST00000399079 CXCL3P19876 107 aa10.29□□□□□ -0.76
HLA-DQB1-202ENST00000399079 C4BPBP20851 252 aa10.29□□□□□ -0.76
HLA-DQB1-202ENST00000399079 ID1P41134 155 aa10.29□□□□□ -0.76
HLA-DQB1-202ENST00000399079 PSMB3P49720 205 aa10.29□□□□□ -0.76
HLA-DQB1-202ENST00000399079 FGL1Q08830 312 aa10.29□□□□□ -0.76
HLA-DQB1-202ENST00000399079 LINC00305Q7Z4B0 112 aa10.29□□□□□ -0.76
HLA-DQB1-202ENST00000399079 OR5C1Q8NGR4 320 aa10.29□□□□□ -0.76
HLA-DQB1-202ENST00000399079 C16orf92Q96LL3 132 aa10.29□□□□□ -0.76
HLA-DQB1-202ENST00000399079 C20orf173Q96LM9 149 aa10.29□□□□□ -0.76
HLA-DQB1-202ENST00000399079 GPR82Q96P67 336 aa10.29□□□□□ -0.76
HLA-DQB1-202ENST00000399079 RARRES2Q99969 163 aa10.29□□□□□ -0.76
HLA-DQB1-202ENST00000399079 F6UB75 175 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 IGKV3-20P01619 116 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 S100A7P31151 101 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 PRR20EP86478 221 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 PRR20CP86479 221 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 PRR20DP86480 221 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 PRR20BP86481 221 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 PRR20AP86496 221 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 RAB31Q13636 194 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 MORN5Q5VZ52 161 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 OR11H2Q8NH07 326 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 SLC25A31Q9H0C2 315 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 CLEC5AQ9NY25 188 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 COX7A2P2O60397 106 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 SNRPCP09234 159 aaKnown RBP10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 SPP1P10451 314 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 HLA-DRB4P13762 266 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 RPL7P18124 248 aaKnown RBP10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 FGF7P21781 194 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 MEOX2P50222 304 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 CLINT1Q14677 625 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 ATP6V1FQ16864 119 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 PXDC1Q5TGL8 231 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 MORN3Q6PF18 240 aaPredicted RBP10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 THAP6Q8TBB0 222 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 GATAD1Q8WUU5 269 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 SAV1Q9H4B6 383 aaPredicted RBP10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 HLA-DRB4X5D2U9 266 aa10.28□□□□□ -0.76
HLA-DQB1-202ENST00000399079 TRAV8-2A0A0B4J237 113 aa10.27□□□□□ -0.77
HLA-DQB1-202ENST00000399079 ATF4P18848 351 aaPredicted RBP10.27□□□□□ -0.77
HLA-DQB1-202ENST00000399079 OPCMLQ14982 345 aa10.27□□□□□ -0.77
HLA-DQB1-202ENST00000399079 C10orf113Q5VZT2 155 aa10.27□□□□□ -0.77
HLA-DQB1-202ENST00000399079 Q6ZRG5 221 aa10.27□□□□□ -0.77
HLA-DQB1-202ENST00000399079 RNF182Q8N6D2 247 aa10.27□□□□□ -0.77
HLA-DQB1-202ENST00000399079 TENM2Q9NT68 2774 aa10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 ELOA3CA0A087WX78 387 aaPredicted RBP10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 MRPS12O15235 138 aaKnown RBP10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 PRB4P10163 310 aaPredicted RBP10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 RPL29P47914 159 aaKnown RBP10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 B2MP61769 119 aa10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 FOXI2Q6ZQN5 318 aa10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 S100A7AQ86SG5 101 aa10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 CSNK1G2-AS1Q8NCQ2 148 aa10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 OR11H7Q8NGC8 314 aa10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 OR4B1Q8NGF8 309 aa10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 NPCDR1Q9BY65 106 aa10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 DNAJC4Q9NNZ3 241 aa10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 RPRMQ9NS64 109 aa10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 SLC39A9Q9NUM3 307 aa10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 MBD2Q9UBB5 411 aa10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 XCL2Q9UBD3 114 aa10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 PXMP4Q9Y6I8 212 aa10.26□□□□□ -0.77
HLA-DQB1-202ENST00000399079 TRAV5A0A0B4J249 113 aa10.25□□□□□ -0.77
HLA-DQB1-202ENST00000399079 DEFB4AO15263 64 aa10.25□□□□□ -0.77
HLA-DQB1-202ENST00000399079 PET100P0DJ07 73 aa10.25□□□□□ -0.77
HLA-DQB1-202ENST00000399079 HLA-DMBP28068 263 aa10.25□□□□□ -0.77
HLA-DQB1-202ENST00000399079 FXYD7P58549 80 aa10.25□□□□□ -0.77
HLA-DQB1-202ENST00000399079 FCN2Q15485 313 aa10.25□□□□□ -0.77
HLA-DQB1-202ENST00000399079 FAM78BQ5VT40 261 aa10.25□□□□□ -0.77
HLA-DQB1-202ENST00000399079 SAMD13Q5VXD3 122 aa10.25□□□□□ -0.77
HLA-DQB1-202ENST00000399079 IL17DQ8TAD2 202 aa10.25□□□□□ -0.77
HLA-DQB1-202ENST00000399079 CHAC2Q8WUX2 184 aa10.25□□□□□ -0.77
HLA-DQB1-202ENST00000399079 A0A0J9YX75 114 aa10.24□□□□□ -0.77
HLA-DQB1-202ENST00000399079 H3BTX0 84 aa10.24□□□□□ -0.77
HLA-DQB1-202ENST00000399079 NUTF2P61970 127 aaKnown RBP10.24□□□□□ -0.77
HLA-DQB1-202ENST00000399079 GCSAMLQ5JQS6 135 aa10.24□□□□□ -0.77
HLA-DQB1-202ENST00000399079 MED28Q9H204 178 aa10.24□□□□□ -0.77
HLA-DQB1-202ENST00000399079 A0A087X0K7 114 aa10.23□□□□□ -0.77
HLA-DQB1-202ENST00000399079 MPDU1O75352 247 aa10.23□□□□□ -0.77
HLA-DQB1-202ENST00000399079 ZNF705DP0CH99 300 aaPredicted RBP10.23□□□□□ -0.77
HLA-DQB1-202ENST00000399079 ZNF705BP0CI00 300 aaPredicted RBP10.23□□□□□ -0.77
HLA-DQB1-202ENST00000399079 RPL12P30050 165 aaKnown RBP10.23□□□□□ -0.77
HLA-DQB1-202ENST00000399079 RGS21Q2M5E4 152 aa10.23□□□□□ -0.77
HLA-DQB1-202ENST00000399079 TMEM41BQ5BJD5 291 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms