RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 SOCS3O14543 225 aa10.51□□□□□ -0.73
HDDC2-202ENST00000398153 SPRY2O43597 315 aa10.51□□□□□ -0.73
HDDC2-202ENST00000398153 PRR20EP86478 221 aa10.51□□□□□ -0.73
HDDC2-202ENST00000398153 PRR20CP86479 221 aa10.51□□□□□ -0.73
HDDC2-202ENST00000398153 PRR20DP86480 221 aa10.51□□□□□ -0.73
HDDC2-202ENST00000398153 PRR20BP86481 221 aa10.51□□□□□ -0.73
HDDC2-202ENST00000398153 PRR20AP86496 221 aa10.51□□□□□ -0.73
HDDC2-202ENST00000398153 NHLH2Q02577 135 aa10.51□□□□□ -0.73
HDDC2-202ENST00000398153 TRPT1Q86TN4 253 aaKnown RBP10.51□□□□□ -0.73
HDDC2-202ENST00000398153 OR5C1Q8NGR4 320 aa10.51□□□□□ -0.73
HDDC2-202ENST00000398153 OR1L4Q8NGR5 311 aa10.51□□□□□ -0.73
HDDC2-202ENST00000398153 PFDN5Q99471 154 aa10.51□□□□□ -0.73
HDDC2-202ENST00000398153 RNF126Q9BV68 326 aa10.51□□□□□ -0.73
HDDC2-202ENST00000398153 SLC25A32Q9H2D1 315 aa10.51□□□□□ -0.73
HDDC2-202ENST00000398153 DNAJC4Q9NNZ3 241 aa10.51□□□□□ -0.73
HDDC2-202ENST00000398153 HUWE1Q7Z6Z7 4374 aaKnown RBP10.5□□□□□ -0.73
HDDC2-202ENST00000398153 UBE2L5PA0A1B0GUS4 154 aa10.5□□□□□ -0.73
HDDC2-202ENST00000398153 COX7A2P2O60397 106 aa10.5□□□□□ -0.73
HDDC2-202ENST00000398153 LYL1P12980 280 aa10.5□□□□□ -0.73
HDDC2-202ENST00000398153 NUTF2P61970 127 aaKnown RBP10.5□□□□□ -0.73
HDDC2-202ENST00000398153 PATE2Q6UY27 113 aa10.5□□□□□ -0.73
HDDC2-202ENST00000398153 IL17DQ8TAD2 202 aa10.5□□□□□ -0.73
HDDC2-202ENST00000398153 CLUHP3Q96NS8 147 aa10.5□□□□□ -0.73
HDDC2-202ENST00000398153 RSG1Q9BU20 258 aa10.5□□□□□ -0.73
HDDC2-202ENST00000398153 DOK5Q9P104 306 aa10.5□□□□□ -0.73
HDDC2-202ENST00000398153 A0A087X0K7 114 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 ATF4P18848 351 aaPredicted RBP10.49□□□□□ -0.73
HDDC2-202ENST00000398153 FGL1Q08830 312 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 OPCMLQ14982 345 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 OXA1LQ15070 435 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 ACTL10Q5JWF8 245 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 C10orf113Q5VZT2 155 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 LINC00305Q7Z4B0 112 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 MUC7Q8TAX7 377 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 THAP6Q8TBB0 222 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 C16orf92Q96LL3 132 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 UHRF2Q96PU4 802 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 SCRT1Q9BWW7 348 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 RETNQ9HD89 108 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 KCNIP2Q9NS61 270 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 RPRMQ9NS64 109 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 SLC39A9Q9NUM3 307 aa10.49□□□□□ -0.73
HDDC2-202ENST00000398153 HLA-DRB4P13762 266 aa10.48□□□□□ -0.73
HDDC2-202ENST00000398153 CXCL2P19875 107 aa10.48□□□□□ -0.73
HDDC2-202ENST00000398153 CXCL3P19876 107 aa10.48□□□□□ -0.73
HDDC2-202ENST00000398153 FGF7P21781 194 aa10.48□□□□□ -0.73
HDDC2-202ENST00000398153 RPL12P30050 165 aaKnown RBP10.48□□□□□ -0.73
HDDC2-202ENST00000398153 B2MP61769 119 aa10.48□□□□□ -0.73
HDDC2-202ENST00000398153 DEFB135Q30KP9 77 aa10.48□□□□□ -0.73
HDDC2-202ENST00000398153 FOXI2Q6ZQN5 318 aa10.48□□□□□ -0.73
HDDC2-202ENST00000398153 BPIFA4PQ86YQ2 179 aa10.48□□□□□ -0.73
HDDC2-202ENST00000398153 TMEM37Q8WXS4 190 aa10.48□□□□□ -0.73
HDDC2-202ENST00000398153 C1QTNF4Q9BXJ3 329 aa10.48□□□□□ -0.73
HDDC2-202ENST00000398153 NPCDR1Q9BY65 106 aa10.48□□□□□ -0.73
HDDC2-202ENST00000398153 HLA-DRB4X5D2U9 266 aa10.48□□□□□ -0.73
HDDC2-202ENST00000398153 KNCNA6PVL3 124 aa10.47□□□□□ -0.73
HDDC2-202ENST00000398153 H3BMM0 161 aa10.47□□□□□ -0.73
HDDC2-202ENST00000398153 CA1P00915 261 aaPredicted RBP10.47□□□□□ -0.73
HDDC2-202ENST00000398153 MIC13Q5XKP0 118 aa10.47□□□□□ -0.73
HDDC2-202ENST00000398153 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.47□□□□□ -0.73
HDDC2-202ENST00000398153 ZNF709Q8N972 641 aa10.47□□□□□ -0.73
HDDC2-202ENST00000398153 LINC00052Q96N35 136 aa10.47□□□□□ -0.73
HDDC2-202ENST00000398153 ATP5SQ99766 215 aa10.47□□□□□ -0.73
HDDC2-202ENST00000398153 SAV1Q9H4B6 383 aaPredicted RBP10.47□□□□□ -0.73
HDDC2-202ENST00000398153 MBD2Q9UBB5 411 aa10.47□□□□□ -0.73
HDDC2-202ENST00000398153 HSPB11Q9Y547 144 aa10.47□□□□□ -0.73
HDDC2-202ENST00000398153 PXMP4Q9Y6I8 212 aa10.47□□□□□ -0.73
HDDC2-202ENST00000398153 C17orf112F2Z3M2 114 aa10.46□□□□□ -0.73
HDDC2-202ENST00000398153 GIPP09681 153 aaPredicted RBP10.46□□□□□ -0.73
HDDC2-202ENST00000398153 FCN2Q15485 313 aa10.46□□□□□ -0.73
HDDC2-202ENST00000398153 EBLN2Q6P2I7 272 aa10.46□□□□□ -0.73
HDDC2-202ENST00000398153 OR11H7Q8NGC8 314 aa10.46□□□□□ -0.73
HDDC2-202ENST00000398153 C17orf77Q96MU5 243 aa10.46□□□□□ -0.73
HDDC2-202ENST00000398153 PARD6GQ9BYG4 376 aaPredicted RBP10.46□□□□□ -0.73
HDDC2-202ENST00000398153 WDR61Q9GZS3 305 aaKnown RBP10.46□□□□□ -0.73
HDDC2-202ENST00000398153 CLEC5AQ9NY25 188 aa10.46□□□□□ -0.73
HDDC2-202ENST00000398153 MRPS12O15235 138 aaKnown RBP10.45□□□□□ -0.74
HDDC2-202ENST00000398153 CLINT1Q14677 625 aa10.45□□□□□ -0.74
HDDC2-202ENST00000398153 GUK1Q16774 197 aa10.45□□□□□ -0.74
HDDC2-202ENST00000398153 LCN15Q6UWW0 184 aa10.45□□□□□ -0.74
HDDC2-202ENST00000398153 RARRES2Q99969 163 aa10.45□□□□□ -0.74
HDDC2-202ENST00000398153 SLC50A1Q9BRV3 221 aa10.45□□□□□ -0.74
HDDC2-202ENST00000398153 HRH4Q9H3N8 390 aa10.45□□□□□ -0.74
HDDC2-202ENST00000398153 IFNA5P01569 189 aa10.44□□□□□ -0.74
HDDC2-202ENST00000398153 LRRC20Q8TCA0 184 aa10.44□□□□□ -0.74
HDDC2-202ENST00000398153 DNAH7Q8WXX0 4024 aa10.43□□□□□ -0.74
HDDC2-202ENST00000398153 AGRNO00468 2067 aa10.43□□□□□ -0.74
HDDC2-202ENST00000398153 A0A0J9YX75 114 aa10.43□□□□□ -0.74
HDDC2-202ENST00000398153 DUSP14O95147 198 aaKnown RBP10.43□□□□□ -0.74
HDDC2-202ENST00000398153 GIG44P09565 113 aaPredicted RBP10.43□□□□□ -0.74
HDDC2-202ENST00000398153 OR11H2Q8NH07 326 aa10.43□□□□□ -0.74
HDDC2-202ENST00000398153 SCGB1C1Q8TD33 95 aa10.43□□□□□ -0.74
HDDC2-202ENST00000398153 TMEM14CQ9P0S9 112 aa10.43□□□□□ -0.74
HDDC2-202ENST00000398153 TRAV8-2A0A0B4J237 113 aa10.42□□□□□ -0.74
HDDC2-202ENST00000398153 A8MTW9 85 aa10.42□□□□□ -0.74
HDDC2-202ENST00000398153 ZNF253O75346 499 aa10.42□□□□□ -0.74
HDDC2-202ENST00000398153 IGLC2P0DOY2 106 aa10.42□□□□□ -0.74
HDDC2-202ENST00000398153 CASC10Q5T4H9 136 aa10.42□□□□□ -0.74
HDDC2-202ENST00000398153 CSNK1G2-AS1Q8NCQ2 148 aa10.42□□□□□ -0.74
HDDC2-202ENST00000398153 AQP10Q96PS8 301 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms