RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 DEFB131AP59861 70 aa11.64□□□□□ -0.55
CUX2-202ENST00000397643 TCF24Q7RTU0 167 aa11.64□□□□□ -0.55
CUX2-202ENST00000397643 AQP10Q96PS8 301 aa11.64□□□□□ -0.55
CUX2-202ENST00000397643 TMEM147Q9BVK8 224 aa11.64□□□□□ -0.55
CUX2-202ENST00000397643 NPVFQ9HCQ7 196 aa11.64□□□□□ -0.55
CUX2-202ENST00000397643 UQCC1Q9NVA1 299 aa11.64□□□□□ -0.55
CUX2-202ENST00000397643 TNFSF18Q9UNG2 199 aa11.64□□□□□ -0.55
CUX2-202ENST00000397643 ELOA3CA0A087WX78 387 aaPredicted RBP11.63□□□□□ -0.55
CUX2-202ENST00000397643 ZFP92A6NM28 416 aa11.63□□□□□ -0.55
CUX2-202ENST00000397643 DFFBO76075 338 aa11.63□□□□□ -0.55
CUX2-202ENST00000397643 YIF1AO95070 293 aa11.63□□□□□ -0.55
CUX2-202ENST00000397643 C4BPBP20851 252 aa11.63□□□□□ -0.55
CUX2-202ENST00000397643 TMEM144Q7Z5S9 345 aa11.63□□□□□ -0.55
CUX2-202ENST00000397643 OR5C1Q8NGR4 320 aa11.63□□□□□ -0.55
CUX2-202ENST00000397643 ST8SIA2Q92186 375 aa11.63□□□□□ -0.55
CUX2-202ENST00000397643 MS4A6AQ9H2W1 248 aa11.63□□□□□ -0.55
CUX2-202ENST00000397643 VSIRQ9H7M9 311 aa11.63□□□□□ -0.55
CUX2-202ENST00000397643 X6R8D5 127 aa11.63□□□□□ -0.55
CUX2-202ENST00000397643 HMSDA8MTL9 139 aa11.62□□□□□ -0.55
CUX2-202ENST00000397643 ARPC5O15511 151 aa11.62□□□□□ -0.55
CUX2-202ENST00000397643 APOHP02749 345 aaPredicted RBP11.62□□□□□ -0.55
CUX2-202ENST00000397643 FABP1P07148 127 aa11.62□□□□□ -0.55
CUX2-202ENST00000397643 IGLC1P0CG04 106 aa11.62□□□□□ -0.55
CUX2-202ENST00000397643 MIFP14174 115 aa11.62□□□□□ -0.55
CUX2-202ENST00000397643 PAFAH1B2P68402 229 aa11.62□□□□□ -0.55
CUX2-202ENST00000397643 POM121L12Q8N7R1 296 aa11.62□□□□□ -0.55
CUX2-202ENST00000397643 THAP8Q8NA92 274 aa11.62□□□□□ -0.55
CUX2-202ENST00000397643 TRAV2A0A0B4J234 112 aa11.61□□□□□ -0.55
CUX2-202ENST00000397643 C1QBP02746 253 aa11.61□□□□□ -0.55
CUX2-202ENST00000397643 CLINT1Q14677 625 aa11.61□□□□□ -0.55
CUX2-202ENST00000397643 VWC2Q2TAL6 325 aa11.61□□□□□ -0.55
CUX2-202ENST00000397643 TIGITQ495A1 244 aa11.61□□□□□ -0.55
CUX2-202ENST00000397643 TEPPQ6URK8 271 aa11.61□□□□□ -0.55
CUX2-202ENST00000397643 TRPT1Q86TN4 253 aaKnown RBP11.61□□□□□ -0.55
CUX2-202ENST00000397643 TRGV9Q99603 122 aa11.61□□□□□ -0.55
CUX2-202ENST00000397643 SCRT1Q9BWW7 348 aa11.61□□□□□ -0.55
CUX2-202ENST00000397643 CELA1Q9UNI1 258 aa11.61□□□□□ -0.55
CUX2-202ENST00000397643 RNF222A6NCQ9 220 aa11.6□□□□□ -0.55
CUX2-202ENST00000397643 PFDN1O60925 122 aa11.6□□□□□ -0.55
CUX2-202ENST00000397643 IGKV1-17P01599 117 aa11.6□□□□□ -0.55
CUX2-202ENST00000397643 CD5P06127 495 aa11.6□□□□□ -0.55
CUX2-202ENST00000397643 AP2S1P53680 142 aaPredicted RBP11.6□□□□□ -0.55
CUX2-202ENST00000397643 YPEL3P61236 119 aaPredicted RBP11.6□□□□□ -0.55
CUX2-202ENST00000397643 OR2F1Q13607 317 aa11.6□□□□□ -0.55
CUX2-202ENST00000397643 RAB31Q13636 194 aa11.6□□□□□ -0.55
CUX2-202ENST00000397643 TOMM20LQ6UXN7 152 aa11.6□□□□□ -0.55
CUX2-202ENST00000397643 ZNF600Q6ZNG1 722 aa11.6□□□□□ -0.55
CUX2-202ENST00000397643 OR11H4Q8NGC9 324 aa11.6□□□□□ -0.55
CUX2-202ENST00000397643 Q8WTZ3 238 aa11.6□□□□□ -0.55
CUX2-202ENST00000397643 ATP5SQ99766 215 aa11.6□□□□□ -0.55
CUX2-202ENST00000397643 SMIM3Q9BZL3 60 aa11.6□□□□□ -0.55
CUX2-202ENST00000397643 ZFAND3Q9H8U3 227 aa11.6□□□□□ -0.55
CUX2-202ENST00000397643 LRP1BQ9NZR2 4599 aa11.6□□□□□ -0.55
CUX2-202ENST00000397643 IGHV3-66A0A0C4DH42 116 aa11.59□□□□□ -0.55
CUX2-202ENST00000397643 UBE2L5PA0A1B0GUS4 154 aa11.59□□□□□ -0.55
CUX2-202ENST00000397643 M0R2N4 97 aa11.59□□□□□ -0.55
CUX2-202ENST00000397643 IFNA5P01569 189 aa11.59□□□□□ -0.55
CUX2-202ENST00000397643 RD3LP0DJH9 198 aa11.59□□□□□ -0.55
CUX2-202ENST00000397643 C12orf74Q32Q52 190 aa11.59□□□□□ -0.55
CUX2-202ENST00000397643 LGALS9BQ3B8N2 356 aa11.59□□□□□ -0.55
CUX2-202ENST00000397643 ZFP69Q49AA0 526 aa11.59□□□□□ -0.55
CUX2-202ENST00000397643 TMEM41BQ5BJD5 291 aa11.59□□□□□ -0.55
CUX2-202ENST00000397643 ZNF575Q86XF7 245 aa11.59□□□□□ -0.55
CUX2-202ENST00000397643 STHQ8IWL8 128 aa11.59□□□□□ -0.55
CUX2-202ENST00000397643 CSNK1G2-AS1Q8NCQ2 148 aa11.59□□□□□ -0.55
CUX2-202ENST00000397643 HYLS1Q96M11 299 aa11.59□□□□□ -0.55
CUX2-202ENST00000397643 WDR83OSQ9Y284 106 aa11.59□□□□□ -0.55
CUX2-202ENST00000397643 IGKV1D-37A0A075B6S9 117 aa11.58□□□□□ -0.56
CUX2-202ENST00000397643 IGKV1OR2-108A0A075B7D4 117 aa11.58□□□□□ -0.56
CUX2-202ENST00000397643 A0A0D9SG52 128 aa11.58□□□□□ -0.56
CUX2-202ENST00000397643 DNASE2O00115 360 aaPredicted RBP11.58□□□□□ -0.56
CUX2-202ENST00000397643 TOMM40O96008 361 aa11.58□□□□□ -0.56
CUX2-202ENST00000397643 P0DMU3 169 aa11.58□□□□□ -0.56
CUX2-202ENST00000397643 FAM231AP0DMU4 169 aa11.58□□□□□ -0.56
CUX2-202ENST00000397643 FAM231CP0DMU5 169 aa11.58□□□□□ -0.56
CUX2-202ENST00000397643 SELENOTP62341 195 aa11.58□□□□□ -0.56
CUX2-202ENST00000397643 CD300CQ08708 224 aa11.58□□□□□ -0.56
CUX2-202ENST00000397643 ZNF345Q14585 488 aa11.58□□□□□ -0.56
CUX2-202ENST00000397643 CYP2G1PQ6ZSU1 146 aa11.58□□□□□ -0.56
CUX2-202ENST00000397643 SCGB1C1Q8TD33 95 aa11.58□□□□□ -0.56
CUX2-202ENST00000397643 GINS3Q9BRX5 216 aa11.58□□□□□ -0.56
CUX2-202ENST00000397643 DEFB131BA0A096LNP1 70 aa11.57□□□□□ -0.56
CUX2-202ENST00000397643 TAAR5O14804 337 aa11.57□□□□□ -0.56
CUX2-202ENST00000397643 MPDU1O75352 247 aa11.57□□□□□ -0.56
CUX2-202ENST00000397643 CFDP00746 253 aaPredicted RBP11.57□□□□□ -0.56
CUX2-202ENST00000397643 SPP1P10451 314 aa11.57□□□□□ -0.56
CUX2-202ENST00000397643 FGF7P21781 194 aa11.57□□□□□ -0.56
CUX2-202ENST00000397643 ZNF90Q03938 601 aa11.57□□□□□ -0.56
CUX2-202ENST00000397643 ZNF266Q14584 549 aa11.57□□□□□ -0.56
CUX2-202ENST00000397643 MORN3Q6PF18 240 aaPredicted RBP11.57□□□□□ -0.56
CUX2-202ENST00000397643 Q6ZR54 194 aa11.57□□□□□ -0.56
CUX2-202ENST00000397643 ZNF767PQ75MW2 155 aa11.57□□□□□ -0.56
CUX2-202ENST00000397643 KCNRGQ8N5I3 272 aa11.57□□□□□ -0.56
CUX2-202ENST00000397643 WFDC1Q9HC57 220 aa11.57□□□□□ -0.56
CUX2-202ENST00000397643 PUS1Q9Y606 427 aaKnown RBP eCLIP11.57□□□□□ -0.56
CUX2-202ENST00000397643 KNCNA6PVL3 124 aa11.56□□□□□ -0.56
CUX2-202ENST00000397643 K7EQG2 157 aa11.56□□□□□ -0.56
CUX2-202ENST00000397643 AGPAT2O15120 278 aa11.56□□□□□ -0.56
CUX2-202ENST00000397643 PSG1P11464 419 aa11.56□□□□□ -0.56
CUX2-202ENST00000397643 CAMLGP49069 296 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms