RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 EEF1AKMT3Q96AZ1 226 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 SOX21Q9Y651 276 aaPredicted RBP8.8□□□□□ -1
CCDC40-204ENST00000397545 MYO9AB2RTY4 2548 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 NBR2O15453 112 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 IGHV2-5P01817 119 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 OR10J3Q5JRS4 329 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 NUP35Q8NFH5 326 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 ANAPC10Q9UM13 185 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 ADAMTS20P59510 1910 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 PSMB11A5LHX3 300 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 FABP5P3A8MUU1 101 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 A8MWP6 167 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 PDLIM4P50479 330 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 ATP5J2P56134 94 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 IL15RAQ13261 267 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 Q6ZS49 121 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 COLCA1Q6ZS62 124 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 DDB2Q92466 427 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 VKORC1Q9BQB6 163 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 EXPH5Q8NEV8 1989 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 SNCGO76070 127 aa8.79□□□□□ -1
CCDC40-204ENST00000397545 FAM106AQ4KMX7 169 aa8.79□□□□□ -1
CCDC40-204ENST00000397545 TMEM200BQ69YZ2 307 aa8.79□□□□□ -1
CCDC40-204ENST00000397545 IGFL4Q6B9Z1 124 aa8.79□□□□□ -1
CCDC40-204ENST00000397545 ZNF114Q8NC26 417 aa8.79□□□□□ -1
CCDC40-204ENST00000397545 BEND2Q8NDZ0 799 aa8.79□□□□□ -1
CCDC40-204ENST00000397545 WFDC12Q8WWY7 111 aa8.79□□□□□ -1
CCDC40-204ENST00000397545 JMJD8Q96S16 334 aa8.79□□□□□ -1
CCDC40-204ENST00000397545 A0A087X0K7 114 aa8.79□□□□□ -1
CCDC40-204ENST00000397545 IGHV2-70P01814 119 aa8.79□□□□□ -1
CCDC40-204ENST00000397545 ZNF256Q9Y2P7 627 aaPredicted RBP8.79□□□□□ -1
CCDC40-204ENST00000397545 LY6HO94772 140 aa8.79□□□□□ -1
CCDC40-204ENST00000397545 RIPPLY3P57055 190 aa8.79□□□□□ -1
CCDC40-204ENST00000397545 RPL15P61313 204 aaKnown RBP8.79□□□□□ -1
CCDC40-204ENST00000397545 MBNL3Q9NUK0 354 aaKnown RBP8.79□□□□□ -1
CCDC40-204ENST00000397545 NAV3Q8IVL0 2385 aa8.79□□□□□ -1
CCDC40-204ENST00000397545 IGKV2-40A0A087WW87 121 aaPredicted RBP8.78□□□□□ -1
CCDC40-204ENST00000397545 IGKV2D-40P01614 121 aaPredicted RBP8.78□□□□□ -1
CCDC40-204ENST00000397545 COX6CP09669 75 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 RAB9AP51151 201 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 C10orf91Q5T1B1 145 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 SPACA3Q8IXA5 215 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 C2orf88Q9BSF0 95 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 SNHG12Q9BXW3 62 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 FAM181BA6NEQ2 426 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 ATP5LO75964 103 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 UCNP55089 124 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 HAPLN4Q86UW8 402 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 Q8TAT8 98 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 IFI27L1Q96BM0 104 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 ZNF257Q9Y2Q1 563 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 POLR3KQ9Y2Y1 108 aaPredicted RBP8.78□□□□□ -1
CCDC40-204ENST00000397545 NPIPB6E9PJ23 425 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 HBDP02042 147 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 PLSCR4Q9NRQ2 329 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 SLC25A15Q9Y619 301 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 TLN2Q9Y4G6 2542 aa8.78□□□□□ -1
CCDC40-204ENST00000397545 TCRAP04437 139 aa8.77□□□□□ -1
CCDC40-204ENST00000397545 FAM90A9PA6NNJ1 464 aa8.77□□□□□ -1.01
CCDC40-204ENST00000397545 CEACAM4O75871 244 aa8.77□□□□□ -1.01
CCDC40-204ENST00000397545 Q6AWC8 147 aa8.77□□□□□ -1.01
CCDC40-204ENST00000397545 SYT8Q8NBV8 401 aa8.77□□□□□ -1.01
CCDC40-204ENST00000397545 C8orf46Q8TAG6 207 aa8.77□□□□□ -1.01
CCDC40-204ENST00000397545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.77□□□□□ -1.01
CCDC40-204ENST00000397545 RHOGP84095 191 aa8.77□□□□□ -1.01
CCDC40-204ENST00000397545 WDR86Q86TI4 376 aa8.77□□□□□ -1.01
CCDC40-204ENST00000397545 OR2K2Q8NGT1 345 aa8.77□□□□□ -1.01
CCDC40-204ENST00000397545 D6R8Y8 96 aa8.77□□□□□ -1.01
CCDC40-204ENST00000397545 SRD5A1P18405 259 aa8.77□□□□□ -1.01
CCDC40-204ENST00000397545 TCF15Q12870 199 aa8.77□□□□□ -1.01
CCDC40-204ENST00000397545 ADIPOQQ15848 244 aa8.77□□□□□ -1.01
CCDC40-204ENST00000397545 FAM169BQ8N8A8 192 aa8.77□□□□□ -1.01
CCDC40-204ENST00000397545 MDS2Q8NDY4 140 aa8.77□□□□□ -1.01
CCDC40-204ENST00000397545 WNT2P09544 360 aa8.76□□□□□ -1.01
CCDC40-204ENST00000397545 RNASE4P34096 147 aaKnown RBP8.76□□□□□ -1.01
CCDC40-204ENST00000397545 ASIPP42127 132 aa8.76□□□□□ -1.01
CCDC40-204ENST00000397545 DUX4L9Q6RFH8 374 aaPredicted RBP8.76□□□□□ -1.01
CCDC40-204ENST00000397545 NEUROG1Q92886 237 aa8.76□□□□□ -1.01
CCDC40-204ENST00000397545 SLC25A39Q9BZJ4 359 aaPredicted RBP8.76□□□□□ -1.01
CCDC40-204ENST00000397545 PLA2G2EQ9NZK7 142 aa8.76□□□□□ -1.01
CCDC40-204ENST00000397545 NACAE9PAV3 2078 aa8.76□□□□□ -1.01
CCDC40-204ENST00000397545 CHD3Q12873 2000 aaKnown RBP8.76□□□□□ -1.01
CCDC40-204ENST00000397545 RNASE2P10153 161 aaKnown RBP8.76□□□□□ -1.01
CCDC40-204ENST00000397545 KLRD1Q13241 179 aa8.76□□□□□ -1.01
CCDC40-204ENST00000397545 OR5AN1Q8NGI8 311 aa8.76□□□□□ -1.01
CCDC40-204ENST00000397545 GEMIN7Q9H840 131 aaKnown RBP8.76□□□□□ -1.01
CCDC40-204ENST00000397545 LYPD2Q6UXB3 125 aa8.76□□□□□ -1.01
CCDC40-204ENST00000397545 C5orf30Q96GV9 206 aa8.76□□□□□ -1.01
CCDC40-204ENST00000397545 H0YJW9 148 aa8.75□□□□□ -1.01
CCDC40-204ENST00000397545 SMKR1H3BMG3 65 aa8.75□□□□□ -1.01
CCDC40-204ENST00000397545 LYZL1Q6UWQ5 148 aa8.75□□□□□ -1.01
CCDC40-204ENST00000397545 ORAOV1Q8WV07 137 aa8.75□□□□□ -1.01
CCDC40-204ENST00000397545 IGHV2-26A0A0B4J1V2 119 aa8.75□□□□□ -1.01
CCDC40-204ENST00000397545 A0A1W2PNU3 283 aaPredicted RBP8.75□□□□□ -1.01
CCDC40-204ENST00000397545 HAX1O00165 279 aa8.75□□□□□ -1.01
CCDC40-204ENST00000397545 IGHV1-8P0DP01 117 aa8.75□□□□□ -1.01
CCDC40-204ENST00000397545 TDGF1P3P51864 188 aa8.75□□□□□ -1.01
CCDC40-204ENST00000397545 GUSBP1Q15486 140 aa8.75□□□□□ -1.01
CCDC40-204ENST00000397545 C19orf54Q5BKX5 351 aa8.75□□□□□ -1.01
CCDC40-204ENST00000397545 PVRIGQ6DKI7 326 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms