RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 IGFL4Q6B9Z1 124 aa8.35□□□□□ -1.07
SYNE4-203ENST00000397428 LRTM2Q8N967 370 aa8.35□□□□□ -1.07
SYNE4-203ENST00000397428 DIRAS2Q96HU8 199 aa8.35□□□□□ -1.07
SYNE4-203ENST00000397428 GPR82Q96P67 336 aa8.35□□□□□ -1.07
SYNE4-203ENST00000397428 DEFB130BP0DP73 79 aa8.34□□□□□ -1.07
SYNE4-203ENST00000397428 DEFB130AP0DP74 79 aa8.34□□□□□ -1.07
SYNE4-203ENST00000397428 ANXA3P12429 323 aa8.34□□□□□ -1.07
SYNE4-203ENST00000397428 IL18Q14116 193 aa8.34□□□□□ -1.07
SYNE4-203ENST00000397428 SLC25A22Q9H936 323 aa8.34□□□□□ -1.07
SYNE4-203ENST00000397428 RSL24D1Q9UHA3 163 aaKnown RBP8.34□□□□□ -1.07
SYNE4-203ENST00000397428 LINC00588Q9Y4M8 146 aa8.34□□□□□ -1.07
SYNE4-203ENST00000397428 HSPG2P98160 4391 aa8.33□□□□□ -1.08
SYNE4-203ENST00000397428 F5H768 121 aa8.33□□□□□ -1.08
SYNE4-203ENST00000397428 MED6O75586 246 aa8.33□□□□□ -1.08
SYNE4-203ENST00000397428 INSP01308 110 aa8.33□□□□□ -1.08
SYNE4-203ENST00000397428 ATP5G1P05496 136 aa8.33□□□□□ -1.08
SYNE4-203ENST00000397428 IAPPP10997 89 aa8.33□□□□□ -1.08
SYNE4-203ENST00000397428 ORM2P19652 201 aa8.33□□□□□ -1.08
SYNE4-203ENST00000397428 GATA2P23769 480 aaPredicted RBP8.33□□□□□ -1.08
SYNE4-203ENST00000397428 S100A7P31151 101 aa8.33□□□□□ -1.08
SYNE4-203ENST00000397428 ATP5G3P48201 142 aa8.33□□□□□ -1.08
SYNE4-203ENST00000397428 CCL18P55774 89 aa8.33□□□□□ -1.08
SYNE4-203ENST00000397428 RPP30P78346 268 aaKnown RBP8.33□□□□□ -1.08
SYNE4-203ENST00000397428 TMEM128Q5BJH2 165 aa8.33□□□□□ -1.08
SYNE4-203ENST00000397428 RNF182Q8N6D2 247 aa8.33□□□□□ -1.08
SYNE4-203ENST00000397428 MAPKAPK5-AS1Q8N8E1 139 aa8.33□□□□□ -1.08
SYNE4-203ENST00000397428 BPIFCQ8NFQ6 507 aa8.33□□□□□ -1.08
SYNE4-203ENST00000397428 SYNGR2O43760 224 aa8.32□□□□□ -1.08
SYNE4-203ENST00000397428 NUDT3O95989 172 aa8.32□□□□□ -1.08
SYNE4-203ENST00000397428 TMEM144Q7Z5S9 345 aa8.32□□□□□ -1.08
SYNE4-203ENST00000397428 Q8N1X5 172 aa8.32□□□□□ -1.08
SYNE4-203ENST00000397428 TMEM256Q8N2U0 113 aa8.32□□□□□ -1.08
SYNE4-203ENST00000397428 DYNC2LI1Q8TCX1 351 aa8.32□□□□□ -1.08
SYNE4-203ENST00000397428 CIB3Q96Q77 187 aaPredicted RBP8.32□□□□□ -1.08
SYNE4-203ENST00000397428 LINC01587Q99440 93 aa8.32□□□□□ -1.08
SYNE4-203ENST00000397428 TMEM147Q9BVK8 224 aa8.32□□□□□ -1.08
SYNE4-203ENST00000397428 SLC25A39Q9BZJ4 359 aaPredicted RBP8.32□□□□□ -1.08
SYNE4-203ENST00000397428 MCUBQ9NWR8 336 aa8.32□□□□□ -1.08
SYNE4-203ENST00000397428 TRAV12-2A0A075B6T6 113 aa8.31□□□□□ -1.08
SYNE4-203ENST00000397428 BOLA2-SMG1P6H3BVE0 249 aa8.31□□□□□ -1.08
SYNE4-203ENST00000397428 WRBO00258 174 aa8.31□□□□□ -1.08
SYNE4-203ENST00000397428 TNFSF8P32971 234 aa8.31□□□□□ -1.08
SYNE4-203ENST00000397428 TAS2R60P59551 318 aa8.31□□□□□ -1.08
SYNE4-203ENST00000397428 PLP1P60201 277 aa8.31□□□□□ -1.08
SYNE4-203ENST00000397428 ZNF493Q6ZR52 646 aa8.31□□□□□ -1.08
SYNE4-203ENST00000397428 BAP18Q8IXM2 172 aa8.31□□□□□ -1.08
SYNE4-203ENST00000397428 RNF141Q8WVD5 230 aa8.31□□□□□ -1.08
SYNE4-203ENST00000397428 SHANK2-AS3Q9BTD1 123 aa8.31□□□□□ -1.08
SYNE4-203ENST00000397428 Q9H8V8 135 aa8.31□□□□□ -1.08
SYNE4-203ENST00000397428 PAIP2BQ9ULR5 123 aaKnown RBP8.31□□□□□ -1.08
SYNE4-203ENST00000397428 FABP12A6NFH5 140 aa8.3□□□□□ -1.08
SYNE4-203ENST00000397428 H3BRN7 92 aa8.3□□□□□ -1.08
SYNE4-203ENST00000397428 CXCL3P19876 107 aa8.3□□□□□ -1.08
SYNE4-203ENST00000397428 ID3Q02535 119 aa8.3□□□□□ -1.08
SYNE4-203ENST00000397428 FGL1Q08830 312 aa8.3□□□□□ -1.08
SYNE4-203ENST00000397428 SPANXN5Q5MJ07 72 aa8.3□□□□□ -1.08
SYNE4-203ENST00000397428 SSX7Q7RTT5 188 aa8.3□□□□□ -1.08
SYNE4-203ENST00000397428 ZNF738Q8NE65 137 aa8.3□□□□□ -1.08
SYNE4-203ENST00000397428 OR8A1Q8NGG7 326 aa8.3□□□□□ -1.08
SYNE4-203ENST00000397428 CCDC59Q9P031 241 aaKnown RBP8.3□□□□□ -1.08
SYNE4-203ENST00000397428 TIMM8BQ9Y5J9 83 aaPredicted RBP8.3□□□□□ -1.08
SYNE4-203ENST00000397428 A0A087X0K7 114 aa8.29□□□□□ -1.08
SYNE4-203ENST00000397428 PMS2P5A8MQ11 134 aa8.29□□□□□ -1.08
SYNE4-203ENST00000397428 HYPMO75409 117 aa8.29□□□□□ -1.08
SYNE4-203ENST00000397428 SFT2D2O95562 160 aa8.29□□□□□ -1.08
SYNE4-203ENST00000397428 RPL7P18124 248 aaKnown RBP8.29□□□□□ -1.08
SYNE4-203ENST00000397428 RHOBP62745 196 aa8.29□□□□□ -1.08
SYNE4-203ENST00000397428 PSG3Q16557 428 aa8.29□□□□□ -1.08
SYNE4-203ENST00000397428 C4orf46Q504U0 113 aa8.29□□□□□ -1.08
SYNE4-203ENST00000397428 CYP2G1PQ6ZSU1 146 aa8.29□□□□□ -1.08
SYNE4-203ENST00000397428 ACOT7LQ6ZUV0 252 aa8.29□□□□□ -1.08
SYNE4-203ENST00000397428 TMED4Q7Z7H5 227 aa8.29□□□□□ -1.08
SYNE4-203ENST00000397428 LINC00612Q8N6U2 182 aa8.29□□□□□ -1.08
SYNE4-203ENST00000397428 ZNF503Q96F45 646 aa8.29□□□□□ -1.08
SYNE4-203ENST00000397428 C16orf74Q96GX8 76 aa8.29□□□□□ -1.08
SYNE4-203ENST00000397428 SLIRPQ9GZT3 109 aaKnown RBP8.29□□□□□ -1.08
SYNE4-203ENST00000397428 STRAPQ9Y3F4 350 aaKnown RBP8.29□□□□□ -1.08
SYNE4-203ENST00000397428 IL5P05113 134 aa8.28□□□□□ -1.08
SYNE4-203ENST00000397428 TMBIM6P55061 237 aa8.28□□□□□ -1.08
SYNE4-203ENST00000397428 HIST1H1AQ02539 215 aaPredicted RBP8.28□□□□□ -1.08
SYNE4-203ENST00000397428 PATE2Q6UY27 113 aa8.28□□□□□ -1.08
SYNE4-203ENST00000397428 SPATA12Q7Z6I5 190 aa8.28□□□□□ -1.08
SYNE4-203ENST00000397428 RNASE8Q8TDE3 154 aaKnown RBP8.28□□□□□ -1.08
SYNE4-203ENST00000397428 RAB2BQ8WUD1 216 aa8.28□□□□□ -1.08
SYNE4-203ENST00000397428 SLC25A21Q9BQT8 299 aaPredicted RBP8.28□□□□□ -1.08
SYNE4-203ENST00000397428 SCRT2Q9NQ03 307 aa8.28□□□□□ -1.08
SYNE4-203ENST00000397428 HIGD1AQ9Y241 93 aa8.28□□□□□ -1.08
SYNE4-203ENST00000397428 H3BNG1 76 aa8.27□□□□□ -1.09
SYNE4-203ENST00000397428 MRPS12O15235 138 aaKnown RBP8.27□□□□□ -1.09
SYNE4-203ENST00000397428 HOXB5P09067 269 aa8.27□□□□□ -1.09
SYNE4-203ENST00000397428 HTN1P15515 57 aa8.27□□□□□ -1.09
SYNE4-203ENST00000397428 BTF3P20290 206 aaKnown RBP8.27□□□□□ -1.09
SYNE4-203ENST00000397428 VAMP1P23763 118 aa8.27□□□□□ -1.09
SYNE4-203ENST00000397428 FAUP35544 74 aaKnown RBP8.27□□□□□ -1.09
SYNE4-203ENST00000397428 CDKN1BP46527 198 aa8.27□□□□□ -1.09
SYNE4-203ENST00000397428 RAP2BP61225 183 aa8.27□□□□□ -1.09
SYNE4-203ENST00000397428 SELENOTP62341 195 aa8.27□□□□□ -1.09
SYNE4-203ENST00000397428 AKR1C1Q04828 323 aa8.27□□□□□ -1.09
SYNE4-203ENST00000397428 PPP1R1AQ13522 171 aa8.27□□□□□ -1.09
SYNE4-203ENST00000397428 CLINT1Q14677 625 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms