RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 KIR2DL5BA0A0G2JN68 375 aa13.12□□□□□ -0.31
TNFSF13-204ENST00000396542 KIR2DL5BA0A0G2JPC4 375 aa13.12□□□□□ -0.31
TNFSF13-204ENST00000396542 A0A1B0GVG6 124 aa13.12□□□□□ -0.31
TNFSF13-204ENST00000396542 GALR1P47211 349 aa13.12□□□□□ -0.31
TNFSF13-204ENST00000396542 FGL1Q08830 312 aa13.12□□□□□ -0.31
TNFSF13-204ENST00000396542 KIR2DL5AQ8N109 375 aa13.12□□□□□ -0.31
TNFSF13-204ENST00000396542 KIR2DL5BQ8NHK3 375 aa13.12□□□□□ -0.31
TNFSF13-204ENST00000396542 RCHY1Q96PM5 261 aa13.12□□□□□ -0.31
TNFSF13-204ENST00000396542 ATP5SQ99766 215 aa13.12□□□□□ -0.31
TNFSF13-204ENST00000396542 NPCDR1Q9BY65 106 aa13.12□□□□□ -0.31
TNFSF13-204ENST00000396542 WDR61Q9GZS3 305 aaKnown RBP13.12□□□□□ -0.31
TNFSF13-204ENST00000396542 SLC39A9Q9NUM3 307 aa13.12□□□□□ -0.31
TNFSF13-204ENST00000396542 RNF24Q9Y225 148 aa13.12□□□□□ -0.31
TNFSF13-204ENST00000396542 COX7A2P2O60397 106 aa13.11□□□□□ -0.31
TNFSF13-204ENST00000396542 MEOX2P50222 304 aa13.11□□□□□ -0.31
TNFSF13-204ENST00000396542 APOC4P55056 127 aa13.11□□□□□ -0.31
TNFSF13-204ENST00000396542 SNRPD3P62318 126 aaKnown RBP13.11□□□□□ -0.31
TNFSF13-204ENST00000396542 Q5BKY6 102 aa13.11□□□□□ -0.31
TNFSF13-204ENST00000396542 PSMG4Q5JS54 123 aa13.11□□□□□ -0.31
TNFSF13-204ENST00000396542 SAMD13Q5VXD3 122 aa13.11□□□□□ -0.31
TNFSF13-204ENST00000396542 Q6ZRG5 221 aa13.11□□□□□ -0.31
TNFSF13-204ENST00000396542 LINC00305Q7Z4B0 112 aa13.11□□□□□ -0.31
TNFSF13-204ENST00000396542 PXMP4Q9Y6I8 212 aa13.11□□□□□ -0.31
TNFSF13-204ENST00000396542 MRPS12O15235 138 aaKnown RBP13.1□□□□□ -0.31
TNFSF13-204ENST00000396542 RPL7P18124 248 aaKnown RBP13.1□□□□□ -0.31
TNFSF13-204ENST00000396542 PSMB3P49720 205 aa13.1□□□□□ -0.31
TNFSF13-204ENST00000396542 B2MP61769 119 aa13.1□□□□□ -0.31
TNFSF13-204ENST00000396542 C10orf113Q5VZT2 155 aa13.1□□□□□ -0.31
TNFSF13-204ENST00000396542 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.1□□□□□ -0.31
TNFSF13-204ENST00000396542 OR1L4Q8NGR5 311 aa13.1□□□□□ -0.31
TNFSF13-204ENST00000396542 RSG1Q9BU20 258 aa13.1□□□□□ -0.31
TNFSF13-204ENST00000396542 DNAJC4Q9NNZ3 241 aa13.1□□□□□ -0.31
TNFSF13-204ENST00000396542 UBE2CO00762 179 aa13.09□□□□□ -0.31
TNFSF13-204ENST00000396542 ISLRO14498 428 aa13.09□□□□□ -0.31
TNFSF13-204ENST00000396542 RPL35AP18077 110 aaKnown RBP13.09□□□□□ -0.31
TNFSF13-204ENST00000396542 AQP10Q96PS8 301 aa13.09□□□□□ -0.31
TNFSF13-204ENST00000396542 PFDN5Q99471 154 aa13.09□□□□□ -0.31
TNFSF13-204ENST00000396542 A0A087X0K7 114 aa13.08□□□□□ -0.32
TNFSF13-204ENST00000396542 G3V3Q6 166 aa13.08□□□□□ -0.32
TNFSF13-204ENST00000396542 ID1P41134 155 aa13.08□□□□□ -0.32
TNFSF13-204ENST00000396542 MORN5Q5VZ52 161 aa13.08□□□□□ -0.32
TNFSF13-204ENST00000396542 Q6ZWC4 215 aa13.08□□□□□ -0.32
TNFSF13-204ENST00000396542 TRPT1Q86TN4 253 aaKnown RBP13.08□□□□□ -0.32
TNFSF13-204ENST00000396542 PARD6GQ9BYG4 376 aaPredicted RBP13.08□□□□□ -0.32
TNFSF13-204ENST00000396542 SMIM3Q9BZL3 60 aa13.08□□□□□ -0.32
TNFSF13-204ENST00000396542 WFDC1Q9HC57 220 aa13.08□□□□□ -0.32
TNFSF13-204ENST00000396542 RETNQ9HD89 108 aa13.08□□□□□ -0.32
TNFSF13-204ENST00000396542 AGRNO00468 2067 aa13.08□□□□□ -0.32
TNFSF13-204ENST00000396542 OR2T35Q8NGX2 323 aa13.07□□□□□ -0.32
TNFSF13-204ENST00000396542 GATAD1Q8WUU5 269 aa13.07□□□□□ -0.32
TNFSF13-204ENST00000396542 KCNIP2Q9NS61 270 aa13.07□□□□□ -0.32
TNFSF13-204ENST00000396542 KNCNA6PVL3 124 aa13.06□□□□□ -0.32
TNFSF13-204ENST00000396542 ATF4P18848 351 aaPredicted RBP13.06□□□□□ -0.32
TNFSF13-204ENST00000396542 ACTL10Q5JWF8 245 aa13.06□□□□□ -0.32
TNFSF13-204ENST00000396542 STHQ8IWL8 128 aa13.06□□□□□ -0.32
TNFSF13-204ENST00000396542 ZNF709Q8N972 641 aa13.06□□□□□ -0.32
TNFSF13-204ENST00000396542 C16orf92Q96LL3 132 aa13.06□□□□□ -0.32
TNFSF13-204ENST00000396542 CSTL1Q9H114 145 aa13.06□□□□□ -0.32
TNFSF13-204ENST00000396542 TP53TG1Q9Y2A0 90 aa13.06□□□□□ -0.32
TNFSF13-204ENST00000396542 TRAV8-2A0A0B4J237 113 aa13.05□□□□□ -0.32
TNFSF13-204ENST00000396542 C17orf112F2Z3M2 114 aa13.05□□□□□ -0.32
TNFSF13-204ENST00000396542 IFNA5P01569 189 aa13.05□□□□□ -0.32
TNFSF13-204ENST00000396542 GCSAMLQ5JQS6 135 aa13.05□□□□□ -0.32
TNFSF13-204ENST00000396542 BPIFA4PQ86YQ2 179 aa13.05□□□□□ -0.32
TNFSF13-204ENST00000396542 LINC00052Q96N35 136 aa13.05□□□□□ -0.32
TNFSF13-204ENST00000396542 WWC2-AS2Q96NR7 200 aa13.05□□□□□ -0.32
TNFSF13-204ENST00000396542 OVOL2Q9BRP0 275 aa13.05□□□□□ -0.32
TNFSF13-204ENST00000396542 TNFSF18Q9UNG2 199 aa13.05□□□□□ -0.32
TNFSF13-204ENST00000396542 TRAV5A0A0B4J249 113 aa13.04□□□□□ -0.32
TNFSF13-204ENST00000396542 RNF222A6NCQ9 220 aa13.04□□□□□ -0.32
TNFSF13-204ENST00000396542 IGLC2P0DOY2 106 aa13.04□□□□□ -0.32
TNFSF13-204ENST00000396542 HLA-DRB4P13762 266 aa13.04□□□□□ -0.32
TNFSF13-204ENST00000396542 SCGB1C1Q8TD33 95 aa13.04□□□□□ -0.32
TNFSF13-204ENST00000396542 C20orf173Q96LM9 149 aa13.04□□□□□ -0.32
TNFSF13-204ENST00000396542 SAV1Q9H4B6 383 aaPredicted RBP13.04□□□□□ -0.32
TNFSF13-204ENST00000396542 HLA-DRB4X5D2U9 266 aa13.04□□□□□ -0.32
TNFSF13-204ENST00000396542 H3BMM0 161 aa13.03□□□□□ -0.32
TNFSF13-204ENST00000396542 SPP1P10451 314 aa13.03□□□□□ -0.32
TNFSF13-204ENST00000396542 CXCL2P19875 107 aa13.03□□□□□ -0.32
TNFSF13-204ENST00000396542 DEFB135Q30KP9 77 aa13.03□□□□□ -0.32
TNFSF13-204ENST00000396542 GDF5OSQ5U4N7 250 aa13.03□□□□□ -0.32
TNFSF13-204ENST00000396542 FOXI2Q6ZQN5 318 aa13.03□□□□□ -0.32
TNFSF13-204ENST00000396542 RNF183Q96D59 192 aa13.03□□□□□ -0.32
TNFSF13-204ENST00000396542 EDA2RQ9HAV5 297 aa13.03□□□□□ -0.32
TNFSF13-204ENST00000396542 hCG_2014768A0A024R1R8 64 aa13.02□□□□□ -0.33
TNFSF13-204ENST00000396542 FXYD6-FXYD2A0A087WZ82 144 aa13.02□□□□□ -0.33
TNFSF13-204ENST00000396542 SPRY2O43597 315 aa13.02□□□□□ -0.33
TNFSF13-204ENST00000396542 GIG44P09565 113 aaPredicted RBP13.02□□□□□ -0.33
TNFSF13-204ENST00000396542 DEFB1P60022 68 aa13.02□□□□□ -0.33
TNFSF13-204ENST00000396542 MORN3Q6PF18 240 aaPredicted RBP13.02□□□□□ -0.33
TNFSF13-204ENST00000396542 INO80EQ8NBZ0 244 aaPredicted RBP13.02□□□□□ -0.33
TNFSF13-204ENST00000396542 HRH4Q9H3N8 390 aa13.02□□□□□ -0.33
TNFSF13-204ENST00000396542 RPRMQ9NS64 109 aa13.02□□□□□ -0.33
TNFSF13-204ENST00000396542 TMEM14CQ9P0S9 112 aa13.02□□□□□ -0.33
TNFSF13-204ENST00000396542 H3BQ15 152 aa13.01□□□□□ -0.33
TNFSF13-204ENST00000396542 CA1P00915 261 aaPredicted RBP13.01□□□□□ -0.33
TNFSF13-204ENST00000396542 ZNF266Q14584 549 aa13.01□□□□□ -0.33
TNFSF13-204ENST00000396542 FAM78BQ5VT40 261 aa13.01□□□□□ -0.33
TNFSF13-204ENST00000396542 SPATA31B1PQ5VZV4 182 aa13.01□□□□□ -0.33
TNFSF13-204ENST00000396542 IGFL4Q6B9Z1 124 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms