RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 LRBAP50851 2863 aa10.68□□□□□ -0.7
NFKB1-202ENST00000394820 TGFAP01135 160 aa10.68□□□□□ -0.7
NFKB1-202ENST00000394820 GPR183P32249 361 aa10.68□□□□□ -0.7
NFKB1-202ENST00000394820 GLRXP35754 106 aa10.68□□□□□ -0.7
NFKB1-202ENST00000394820 PRR30Q53SZ7 412 aaPredicted RBP10.68□□□□□ -0.7
NFKB1-202ENST00000394820 CENPVQ7Z7K6 275 aaPredicted RBP10.68□□□□□ -0.7
NFKB1-202ENST00000394820 SYS1-DBNDD2H3BUS1 97 aa10.68□□□□□ -0.7
NFKB1-202ENST00000394820 IGHV1-46P01743 117 aa10.68□□□□□ -0.7
NFKB1-202ENST00000394820 ARMS2P0C7Q2 107 aa10.68□□□□□ -0.7
NFKB1-202ENST00000394820 WT1-ASQ06250 92 aa10.68□□□□□ -0.7
NFKB1-202ENST00000394820 TIMM23BQ5SRD1 257 aa10.68□□□□□ -0.7
NFKB1-202ENST00000394820 MRPL36Q9P0J6 103 aaKnown RBP10.68□□□□□ -0.7
NFKB1-202ENST00000394820 CFHR2P36980 270 aa10.68□□□□□ -0.7
NFKB1-202ENST00000394820 FAM162BQ5T6X4 162 aa10.68□□□□□ -0.7
NFKB1-202ENST00000394820 C1orf162Q8NEQ5 155 aaPredicted RBP10.68□□□□□ -0.7
NFKB1-202ENST00000394820 NPIPB5A8MRT5 1133 aa10.67□□□□□ -0.7
NFKB1-202ENST00000394820 CRYABP02511 175 aaKnown RBP10.67□□□□□ -0.7
NFKB1-202ENST00000394820 ZNF257Q9Y2Q1 563 aa10.67□□□□□ -0.7
NFKB1-202ENST00000394820 A0A1B0GUT8 65 aa10.67□□□□□ -0.7
NFKB1-202ENST00000394820 TMEM189A5PLL7 270 aa10.67□□□□□ -0.7
NFKB1-202ENST00000394820 LIPFP07098 398 aa10.67□□□□□ -0.7
NFKB1-202ENST00000394820 GUSBP1Q15486 140 aa10.67□□□□□ -0.7
NFKB1-202ENST00000394820 C17orf77Q96MU5 243 aa10.67□□□□□ -0.7
NFKB1-202ENST00000394820 TMEM160Q9NX00 188 aa10.67□□□□□ -0.7
NFKB1-202ENST00000394820 LOXL3P58215 753 aa10.66□□□□□ -0.7
NFKB1-202ENST00000394820 SELENOTP62341 195 aa10.66□□□□□ -0.7
NFKB1-202ENST00000394820 RBPMS2Q6ZRY4 209 aaKnown RBP10.66□□□□□ -0.7
NFKB1-202ENST00000394820 NEUROG1Q92886 237 aa10.66□□□□□ -0.7
NFKB1-202ENST00000394820 GAGE12BA1L429 117 aa10.66□□□□□ -0.7
NFKB1-202ENST00000394820 C17orf58Q2M2W7 97 aa10.66□□□□□ -0.7
NFKB1-202ENST00000394820 OR10AG1Q8NH19 301 aa10.66□□□□□ -0.7
NFKB1-202ENST00000394820 TCRBV4S1A1TA0A5B7 111 aa10.66□□□□□ -0.7
NFKB1-202ENST00000394820 C16orf97H3BN30 126 aa10.66□□□□□ -0.7
NFKB1-202ENST00000394820 ECSCRQ19T08 205 aa10.66□□□□□ -0.7
NFKB1-202ENST00000394820 ZNF329Q86UD4 541 aa10.66□□□□□ -0.7
NFKB1-202ENST00000394820 PNKDQ8N490 385 aa10.66□□□□□ -0.7
NFKB1-202ENST00000394820 IFI27P40305 119 aaPredicted RBP10.65□□□□□ -0.7
NFKB1-202ENST00000394820 SLC25A2Q9BXI2 301 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 TTTY13Q9BZ97 58 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 TMEM14BQ9NUH8 114 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 CCDC168Q8NDH2 2452 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 TMEM213A2RRL7 107 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 IGLV1-44P01699 117 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 PRR20EP86478 221 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 PRR20CP86479 221 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 PRR20DP86480 221 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 PRR20BP86481 221 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 PRR20AP86496 221 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 PSG9Q00887 426 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 BSPH1Q075Z2 132 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 AMN1Q8IY45 258 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 STXBP6Q8NFX7 210 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 RITA1Q96K30 269 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 MBD3L4A6NDZ8 208 aaPredicted RBP10.65□□□□□ -0.7
NFKB1-202ENST00000394820 MBD3L3A6NE82 208 aaPredicted RBP10.65□□□□□ -0.7
NFKB1-202ENST00000394820 MBD3L5A6NJ08 208 aaPredicted RBP10.65□□□□□ -0.7
NFKB1-202ENST00000394820 SAP30O75446 220 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 NDUFB8O95169 186 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 MBD3L2Q8NHZ7 208 aaPredicted RBP10.65□□□□□ -0.7
NFKB1-202ENST00000394820 PRELID3AQ96N28 172 aa10.65□□□□□ -0.7
NFKB1-202ENST00000394820 D6R8Y8 96 aa10.64□□□□□ -0.71
NFKB1-202ENST00000394820 C2orf83Q53S99 150 aa10.64□□□□□ -0.71
NFKB1-202ENST00000394820 GDF5OSQ5U4N7 250 aa10.64□□□□□ -0.71
NFKB1-202ENST00000394820 ZNF503Q96F45 646 aa10.64□□□□□ -0.71
NFKB1-202ENST00000394820 MRPL32Q9BYC8 188 aaKnown RBP10.64□□□□□ -0.71
NFKB1-202ENST00000394820 DSCAMO60469 2012 aa10.64□□□□□ -0.71
NFKB1-202ENST00000394820 IGKV2-40A0A087WW87 121 aaPredicted RBP10.64□□□□□ -0.71
NFKB1-202ENST00000394820 IGHV1-24A0A0C4DH33 117 aa10.64□□□□□ -0.71
NFKB1-202ENST00000394820 A0A1W2PPI3 338 aa10.64□□□□□ -0.71
NFKB1-202ENST00000394820 IGKV2D-40P01614 121 aaPredicted RBP10.64□□□□□ -0.71
NFKB1-202ENST00000394820 S100A4P26447 101 aaKnown RBP10.64□□□□□ -0.71
NFKB1-202ENST00000394820 TMEM200BQ69YZ2 307 aa10.64□□□□□ -0.71
NFKB1-202ENST00000394820 TMEM186Q96B77 213 aa10.64□□□□□ -0.71
NFKB1-202ENST00000394820 CST9LQ9H4G1 147 aa10.64□□□□□ -0.71
NFKB1-202ENST00000394820 SPRY2O43597 315 aa10.64□□□□□ -0.71
NFKB1-202ENST00000394820 RELQ04864 619 aaPredicted RBP10.64□□□□□ -0.71
NFKB1-202ENST00000394820 OSR1Q8TAX0 266 aaPredicted RBP10.64□□□□□ -0.71
NFKB1-202ENST00000394820 PRR7Q8TB68 274 aa10.64□□□□□ -0.71
NFKB1-202ENST00000394820 TRAV9-1A0A075B6T8 112 aa10.63□□□□□ -0.71
NFKB1-202ENST00000394820 A6NDN8 102 aa10.63□□□□□ -0.71
NFKB1-202ENST00000394820 ZNF414Q96IQ9 312 aa10.63□□□□□ -0.71
NFKB1-202ENST00000394820 TCRAP04437 139 aa10.63□□□□□ -0.71
NFKB1-202ENST00000394820 TMEM75Q8N9X5 138 aa10.63□□□□□ -0.71
NFKB1-202ENST00000394820 LINC01560Q8TB33 94 aa10.63□□□□□ -0.71
NFKB1-202ENST00000394820 NHP2Q9NX24 153 aaKnown RBP10.63□□□□□ -0.71
NFKB1-202ENST00000394820 PEF1Q9UBV8 284 aaKnown RBP10.63□□□□□ -0.71
NFKB1-202ENST00000394820 SPCS1Q9Y6A9 102 aa10.63□□□□□ -0.71
NFKB1-202ENST00000394820 IGHV1-69-2A0A0G2JMI3 117 aa10.63□□□□□ -0.71
NFKB1-202ENST00000394820 A0A0G2JNJ9 132 aa10.63□□□□□ -0.71
NFKB1-202ENST00000394820 A1L4Q6 167 aa10.63□□□□□ -0.71
NFKB1-202ENST00000394820 LINC00322Q6ZN03 302 aaPredicted RBP10.63□□□□□ -0.71
NFKB1-202ENST00000394820 Q9UFV3 132 aa10.63□□□□□ -0.71
NFKB1-202ENST00000394820 CUBNO60494 3623 aa10.63□□□□□ -0.71
NFKB1-202ENST00000394820 IGHV3OR16-10A0A075B7F0 116 aa10.62□□□□□ -0.71
NFKB1-202ENST00000394820 FAM231BA6NCW3 169 aa10.62□□□□□ -0.71
NFKB1-202ENST00000394820 H7C2G1 150 aa10.62□□□□□ -0.71
NFKB1-202ENST00000394820 IGFL2Q6UWQ7 119 aa10.62□□□□□ -0.71
NFKB1-202ENST00000394820 Q6ZS92 163 aa10.62□□□□□ -0.71
NFKB1-202ENST00000394820 ORAOV1Q8WV07 137 aa10.62□□□□□ -0.71
NFKB1-202ENST00000394820 GAFA1Q96PS6 74 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms