RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 DUSP14O95147 198 aaKnown RBP10.69□□□□□ -0.7
CHMP3-202ENST00000393773 B2MP61769 119 aa10.69□□□□□ -0.7
CHMP3-202ENST00000393773 SSX7Q7RTT5 188 aa10.69□□□□□ -0.7
CHMP3-202ENST00000393773 OR4D5Q8NGN0 318 aa10.69□□□□□ -0.7
CHMP3-202ENST00000393773 OR1B1Q8NGR6 318 aa10.69□□□□□ -0.7
CHMP3-202ENST00000393773 CBY3A6NI87 242 aa10.68□□□□□ -0.7
CHMP3-202ENST00000393773 PITX3O75364 302 aa10.68□□□□□ -0.7
CHMP3-202ENST00000393773 CFDP00746 253 aaPredicted RBP10.68□□□□□ -0.7
CHMP3-202ENST00000393773 IAPPP10997 89 aa10.68□□□□□ -0.7
CHMP3-202ENST00000393773 TMEM182Q6ZP80 229 aaPredicted RBP10.68□□□□□ -0.7
CHMP3-202ENST00000393773 GPR141Q7Z602 305 aa10.68□□□□□ -0.7
CHMP3-202ENST00000393773 CLVS1Q8IUQ0 354 aaPredicted RBP10.68□□□□□ -0.7
CHMP3-202ENST00000393773 OR1S1Q8NH92 325 aa10.68□□□□□ -0.7
CHMP3-202ENST00000393773 GPR82Q96P67 336 aa10.68□□□□□ -0.7
CHMP3-202ENST00000393773 SLC25A39Q9BZJ4 359 aaPredicted RBP10.68□□□□□ -0.7
CHMP3-202ENST00000393773 Q9H3A6 140 aa10.68□□□□□ -0.7
CHMP3-202ENST00000393773 KCNIP3Q9Y2W7 256 aa10.68□□□□□ -0.7
CHMP3-202ENST00000393773 SRPXP78539 464 aa10.67□□□□□ -0.7
CHMP3-202ENST00000393773 TTC32Q5I0X7 151 aa10.67□□□□□ -0.7
CHMP3-202ENST00000393773 TMEM256Q8N2U0 113 aa10.67□□□□□ -0.7
CHMP3-202ENST00000393773 C16orf74Q96GX8 76 aa10.67□□□□□ -0.7
CHMP3-202ENST00000393773 ANKRD20A5PA0PJZ0 165 aa10.66□□□□□ -0.7
CHMP3-202ENST00000393773 H3BRN7 92 aa10.66□□□□□ -0.7
CHMP3-202ENST00000393773 CTDSPLO15194 276 aa10.66□□□□□ -0.7
CHMP3-202ENST00000393773 AKR1C4P17516 323 aa10.66□□□□□ -0.7
CHMP3-202ENST00000393773 BTF3P20290 206 aaKnown RBP10.66□□□□□ -0.7
CHMP3-202ENST00000393773 GATA2P23769 480 aaPredicted RBP10.66□□□□□ -0.7
CHMP3-202ENST00000393773 RAB11AP62491 216 aa10.66□□□□□ -0.7
CHMP3-202ENST00000393773 CLINT1Q14677 625 aa10.66□□□□□ -0.7
CHMP3-202ENST00000393773 GGNBP1Q5YKI7 109 aa10.66□□□□□ -0.7
CHMP3-202ENST00000393773 ZNF738Q8NE65 137 aa10.66□□□□□ -0.7
CHMP3-202ENST00000393773 RNASE8Q8TDE3 154 aaKnown RBP10.66□□□□□ -0.7
CHMP3-202ENST00000393773 Q9H8V8 135 aa10.66□□□□□ -0.7
CHMP3-202ENST00000393773 CTDSP2O14595 271 aa10.65□□□□□ -0.7
CHMP3-202ENST00000393773 RGS5O15539 181 aa10.65□□□□□ -0.7
CHMP3-202ENST00000393773 ORM2P19652 201 aa10.65□□□□□ -0.7
CHMP3-202ENST00000393773 TAS2R60P59551 318 aa10.65□□□□□ -0.7
CHMP3-202ENST00000393773 BPIFCQ8NFQ6 507 aa10.65□□□□□ -0.7
CHMP3-202ENST00000393773 UPK3BQ9BT76 320 aa10.65□□□□□ -0.7
CHMP3-202ENST00000393773 TMEM147Q9BVK8 224 aa10.65□□□□□ -0.7
CHMP3-202ENST00000393773 DUXBA0A1W2PPF3 345 aa10.64□□□□□ -0.71
CHMP3-202ENST00000393773 ANXA3P12429 323 aa10.64□□□□□ -0.71
CHMP3-202ENST00000393773 HIST1H1AQ02539 215 aaPredicted RBP10.64□□□□□ -0.71
CHMP3-202ENST00000393773 LINC00612Q8N6U2 182 aa10.64□□□□□ -0.71
CHMP3-202ENST00000393773 OR8A1Q8NGG7 326 aa10.64□□□□□ -0.71
CHMP3-202ENST00000393773 TMEM263Q8WUH6 116 aaKnown RBP10.64□□□□□ -0.71
CHMP3-202ENST00000393773 LINC01587Q99440 93 aa10.64□□□□□ -0.71
CHMP3-202ENST00000393773 SCP2D1Q9UJQ7 156 aa10.64□□□□□ -0.71
CHMP3-202ENST00000393773 PAIP2BQ9ULR5 123 aaKnown RBP10.64□□□□□ -0.71
CHMP3-202ENST00000393773 TIMM8BQ9Y5J9 83 aaPredicted RBP10.64□□□□□ -0.71
CHMP3-202ENST00000393773 TRAV26-1A0A087WT03 109 aa10.63□□□□□ -0.71
CHMP3-202ENST00000393773 A0A087X0K7 114 aa10.63□□□□□ -0.71
CHMP3-202ENST00000393773 A0A1W2PPQ1 181 aa10.63□□□□□ -0.71
CHMP3-202ENST00000393773 SMIM18P0DKX4 95 aa10.63□□□□□ -0.71
CHMP3-202ENST00000393773 CXCL3P19876 107 aa10.63□□□□□ -0.71
CHMP3-202ENST00000393773 FGL1Q08830 312 aa10.63□□□□□ -0.71
CHMP3-202ENST00000393773 IL18Q14116 193 aa10.63□□□□□ -0.71
CHMP3-202ENST00000393773 ACOT7LQ6ZUV0 252 aa10.63□□□□□ -0.71
CHMP3-202ENST00000393773 ZNF503Q96F45 646 aa10.63□□□□□ -0.71
CHMP3-202ENST00000393773 SCGB3A2Q96PL1 93 aa10.63□□□□□ -0.71
CHMP3-202ENST00000393773 UHRF2Q96PU4 802 aa10.63□□□□□ -0.71
CHMP3-202ENST00000393773 SHANK2-AS3Q9BTD1 123 aa10.63□□□□□ -0.71
CHMP3-202ENST00000393773 NOP10Q9NPE3 64 aaKnown RBP10.63□□□□□ -0.71
CHMP3-202ENST00000393773 PRB4P10163 310 aaPredicted RBP10.62□□□□□ -0.71
CHMP3-202ENST00000393773 SLC25A6P12236 298 aa10.62□□□□□ -0.71
CHMP3-202ENST00000393773 HTN1P15515 57 aa10.62□□□□□ -0.71
CHMP3-202ENST00000393773 HOXA5P20719 270 aa10.62□□□□□ -0.71
CHMP3-202ENST00000393773 AKR1C1Q04828 323 aa10.62□□□□□ -0.71
CHMP3-202ENST00000393773 ZNF493Q6ZR52 646 aa10.62□□□□□ -0.71
CHMP3-202ENST00000393773 TMEM144Q7Z5S9 345 aa10.62□□□□□ -0.71
CHMP3-202ENST00000393773 RXFP4Q8TDU9 374 aa10.62□□□□□ -0.71
CHMP3-202ENST00000393773 GNPNAT1Q96EK6 184 aaPredicted RBP10.62□□□□□ -0.71
CHMP3-202ENST00000393773 MRPS16Q9Y3D3 137 aaKnown RBP10.62□□□□□ -0.71
CHMP3-202ENST00000393773 ZNF701M0R085 212 aaPredicted RBP10.61□□□□□ -0.71
CHMP3-202ENST00000393773 M6PRP20645 277 aa10.61□□□□□ -0.71
CHMP3-202ENST00000393773 S100A7P31151 101 aa10.61□□□□□ -0.71
CHMP3-202ENST00000393773 CDKN1BP46527 198 aa10.61□□□□□ -0.71
CHMP3-202ENST00000393773 RHOBP62745 196 aa10.61□□□□□ -0.71
CHMP3-202ENST00000393773 SPCS2Q15005 226 aa10.61□□□□□ -0.71
CHMP3-202ENST00000393773 Q6ZRN7 208 aaPredicted RBP10.61□□□□□ -0.71
CHMP3-202ENST00000393773 LRTM2Q8N967 370 aa10.61□□□□□ -0.71
CHMP3-202ENST00000393773 OR10J6PQ8NGY7 276 aa10.61□□□□□ -0.71
CHMP3-202ENST00000393773 CIB3Q96Q77 187 aaPredicted RBP10.61□□□□□ -0.71
CHMP3-202ENST00000393773 MCUBQ9NWR8 336 aa10.61□□□□□ -0.71
CHMP3-202ENST00000393773 PIGBOS1A0A0B4J2F0 54 aa10.6□□□□□ -0.71
CHMP3-202ENST00000393773 A0A0J9YY99 117 aa10.6□□□□□ -0.71
CHMP3-202ENST00000393773 EPM2AB3EWF7 344 aa10.6□□□□□ -0.71
CHMP3-202ENST00000393773 H3BP45 60 aa10.6□□□□□ -0.71
CHMP3-202ENST00000393773 SYNGR2O43760 224 aa10.6□□□□□ -0.71
CHMP3-202ENST00000393773 MED6O75586 246 aa10.6□□□□□ -0.71
CHMP3-202ENST00000393773 RPL7P18124 248 aaKnown RBP10.6□□□□□ -0.71
CHMP3-202ENST00000393773 OR5I1Q13606 314 aa10.6□□□□□ -0.71
CHMP3-202ENST00000393773 KIR3DS1Q14943 382 aa10.6□□□□□ -0.71
CHMP3-202ENST00000393773 PSG3Q16557 428 aa10.6□□□□□ -0.71
CHMP3-202ENST00000393773 ESRGQ1W209 222 aa10.6□□□□□ -0.71
CHMP3-202ENST00000393773 CYP2G1PQ6ZSU1 146 aa10.6□□□□□ -0.71
CHMP3-202ENST00000393773 DIRAS2Q96HU8 199 aa10.6□□□□□ -0.71
CHMP3-202ENST00000393773 ZNF586Q9NXT0 402 aa10.6□□□□□ -0.71
CHMP3-202ENST00000393773 RABL2AQ9UBK7 228 aaPredicted RBP10.6□□□□□ -0.71
CHMP3-202ENST00000393773 RABL2BQ9UNT1 228 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms