RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 PEF1Q9UBV8 284 aaKnown RBP12.92□□□□□ -0.34
PDZD4-202ENST00000393758 BOD1L1Q8NFC6 3051 aa12.92□□□□□ -0.34
PDZD4-202ENST00000393758 C2orf70A6NJV1 201 aa12.92□□□□□ -0.34
PDZD4-202ENST00000393758 J3KRW8 73 aa12.92□□□□□ -0.34
PDZD4-202ENST00000393758 NCR2O95944 276 aa12.92□□□□□ -0.34
PDZD4-202ENST00000393758 POU2AF1Q16633 256 aa12.92□□□□□ -0.34
PDZD4-202ENST00000393758 GTF2H5Q6ZYL4 71 aa12.92□□□□□ -0.34
PDZD4-202ENST00000393758 CHCHD1Q96BP2 118 aaKnown RBP12.92□□□□□ -0.34
PDZD4-202ENST00000393758 DKK4Q9UBT3 224 aa12.92□□□□□ -0.34
PDZD4-202ENST00000393758 PRELID3AQ96N28 172 aa12.91□□□□□ -0.34
PDZD4-202ENST00000393758 SMKR1H3BMG3 65 aa12.91□□□□□ -0.34
PDZD4-202ENST00000393758 PSG9Q00887 426 aa12.91□□□□□ -0.34
PDZD4-202ENST00000393758 C17orf77Q96MU5 243 aa12.91□□□□□ -0.34
PDZD4-202ENST00000393758 A6NDN8 102 aa12.91□□□□□ -0.34
PDZD4-202ENST00000393758 C22orf46C9J442 243 aa12.91□□□□□ -0.34
PDZD4-202ENST00000393758 ITGB1BP1O14713 200 aa12.91□□□□□ -0.34
PDZD4-202ENST00000393758 OR2J3O76001 311 aa12.91□□□□□ -0.34
PDZD4-202ENST00000393758 IFI27P40305 119 aaPredicted RBP12.91□□□□□ -0.34
PDZD4-202ENST00000393758 SCGB2A2Q13296 93 aa12.91□□□□□ -0.34
PDZD4-202ENST00000393758 GUSBP1Q15486 140 aa12.91□□□□□ -0.34
PDZD4-202ENST00000393758 IGFL4Q6B9Z1 124 aa12.91□□□□□ -0.34
PDZD4-202ENST00000393758 SPATA12Q7Z6I5 190 aa12.91□□□□□ -0.34
PDZD4-202ENST00000393758 SLC25A39Q9BZJ4 359 aaPredicted RBP12.91□□□□□ -0.34
PDZD4-202ENST00000393758 CST9LQ9H4G1 147 aa12.91□□□□□ -0.34
PDZD4-202ENST00000393758 ANKHD1Q8IWZ3 2542 aaKnown RBP12.9□□□□□ -0.34
PDZD4-202ENST00000393758 TRAV30A0A087WSZ9 112 aa12.9□□□□□ -0.34
PDZD4-202ENST00000393758 PPIFP30405 207 aaKnown RBP12.9□□□□□ -0.34
PDZD4-202ENST00000393758 PPP1R27Q86WC6 154 aa12.9□□□□□ -0.34
PDZD4-202ENST00000393758 OR5AN1Q8NGI8 311 aa12.9□□□□□ -0.34
PDZD4-202ENST00000393758 C8orf46Q8TAG6 207 aa12.9□□□□□ -0.34
PDZD4-202ENST00000393758 PSG8Q9UQ74 426 aa12.9□□□□□ -0.34
PDZD4-202ENST00000393758 TLN1Q9Y490 2541 aaKnown RBP12.9□□□□□ -0.34
PDZD4-202ENST00000393758 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.9□□□□□ -0.34
PDZD4-202ENST00000393758 ZNF785A8K8V0 405 aa12.9□□□□□ -0.34
PDZD4-202ENST00000393758 D6R8Y8 96 aa12.9□□□□□ -0.34
PDZD4-202ENST00000393758 TOMM40O96008 361 aa12.9□□□□□ -0.34
PDZD4-202ENST00000393758 LHBP01229 141 aa12.9□□□□□ -0.34
PDZD4-202ENST00000393758 PET117Q6UWS5 81 aa12.9□□□□□ -0.34
PDZD4-202ENST00000393758 NGBQ9NPG2 151 aa12.9□□□□□ -0.34
PDZD4-202ENST00000393758 OTOGLQ3ZCN5 2332 aa12.9□□□□□ -0.34
PDZD4-202ENST00000393758 GAGE12BA1L429 117 aa12.9□□□□□ -0.35
PDZD4-202ENST00000393758 MEF2CQ06413 473 aaPredicted RBP12.9□□□□□ -0.35
PDZD4-202ENST00000393758 BVES-AS1Q5T3Y7 98 aa12.9□□□□□ -0.35
PDZD4-202ENST00000393758 MEGF9Q9H1U4 602 aa12.9□□□□□ -0.35
PDZD4-202ENST00000393758 VWC2LB2RUY7 222 aa12.89□□□□□ -0.35
PDZD4-202ENST00000393758 CGB3P0DN86 165 aa12.89□□□□□ -0.35
PDZD4-202ENST00000393758 CGB7P0DN87 165 aa12.89□□□□□ -0.35
PDZD4-202ENST00000393758 C22orf34Q6ZV56 151 aa12.89□□□□□ -0.35
PDZD4-202ENST00000393758 ZNF833PQ6ZTB9 187 aa12.89□□□□□ -0.35
PDZD4-202ENST00000393758 Q86TA4 180 aa12.89□□□□□ -0.35
PDZD4-202ENST00000393758 AMN1Q8IY45 258 aa12.89□□□□□ -0.35
PDZD4-202ENST00000393758 TMEM133Q9H2Q1 129 aa12.89□□□□□ -0.35
PDZD4-202ENST00000393758 OTORQ9NRC9 128 aa12.89□□□□□ -0.35
PDZD4-202ENST00000393758 UFC1Q9Y3C8 167 aa12.89□□□□□ -0.35
PDZD4-202ENST00000393758 HIST1H1AQ02539 215 aaPredicted RBP12.89□□□□□ -0.35
PDZD4-202ENST00000393758 TMEM97Q5BJF2 176 aa12.89□□□□□ -0.35
PDZD4-202ENST00000393758 PRSS57Q6UWY2 283 aa12.89□□□□□ -0.35
PDZD4-202ENST00000393758 ZNF414Q96IQ9 312 aa12.89□□□□□ -0.35
PDZD4-202ENST00000393758 TMEM213A2RRL7 107 aa12.88□□□□□ -0.35
PDZD4-202ENST00000393758 SOX21Q9Y651 276 aaPredicted RBP12.88□□□□□ -0.35
PDZD4-202ENST00000393758 NOTCH3Q9UM47 2321 aa12.88□□□□□ -0.35
PDZD4-202ENST00000393758 A1L4Q6 167 aa12.88□□□□□ -0.35
PDZD4-202ENST00000393758 WIPF2Q8TF74 440 aaPredicted RBP12.88□□□□□ -0.35
PDZD4-202ENST00000393758 OCIAD2Q56VL3 154 aa12.87□□□□□ -0.35
PDZD4-202ENST00000393758 SEM1Q6ZVN7 128 aa12.87□□□□□ -0.35
PDZD4-202ENST00000393758 Q8TAT8 98 aa12.87□□□□□ -0.35
PDZD4-202ENST00000393758 IGHV3-49A0A0A0MS15 119 aa12.87□□□□□ -0.35
PDZD4-202ENST00000393758 IGHV3-66A0A0C4DH42 116 aa12.87□□□□□ -0.35
PDZD4-202ENST00000393758 IGHV2-70DA0A0C4DH43 119 aa12.87□□□□□ -0.35
PDZD4-202ENST00000393758 SPG11Q96JI7 2443 aa12.87□□□□□ -0.35
PDZD4-202ENST00000393758 NPIPB5A8MRT5 1133 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 ARL3P36405 182 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 KLF5Q13887 457 aaPredicted RBP12.86□□□□□ -0.35
PDZD4-202ENST00000393758 ADIPOQQ15848 244 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 S100A7AQ86SG5 101 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 IGKV2-40A0A087WW87 121 aaPredicted RBP12.86□□□□□ -0.35
PDZD4-202ENST00000393758 IGKV2D-40P01614 121 aaPredicted RBP12.86□□□□□ -0.35
PDZD4-202ENST00000393758 TMEM30BQ3MIR4 351 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 LYZL1Q6UWQ5 148 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 MBD6Q96DN6 1003 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 TRGV9Q99603 122 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 NDFIP1Q9BT67 221 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 MGAQ8IWI9 3026 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 IGKV1D-37A0A075B6S9 117 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 PPIAL4CA0A0B4J2A2 164 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 MBD3L4A6NDZ8 208 aaPredicted RBP12.86□□□□□ -0.35
PDZD4-202ENST00000393758 MBD3L3A6NE82 208 aaPredicted RBP12.86□□□□□ -0.35
PDZD4-202ENST00000393758 MBD3L5A6NJ08 208 aaPredicted RBP12.86□□□□□ -0.35
PDZD4-202ENST00000393758 FAM90A27PA6NNH2 459 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 PPIAL4GP0DN37 164 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 IGHV1-8P0DP01 117 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 RUSC1-AS1Q66K80 236 aa12.86□□□□□ -0.35
PDZD4-202ENST00000393758 MBD3L2Q8NHZ7 208 aaPredicted RBP12.86□□□□□ -0.35
PDZD4-202ENST00000393758 CEP295Q9C0D2 2601 aa12.85□□□□□ -0.35
PDZD4-202ENST00000393758 IGLV3-9A0A075B6K5 115 aa12.85□□□□□ -0.35
PDZD4-202ENST00000393758 TMEM178BH3BS89 294 aa12.85□□□□□ -0.35
PDZD4-202ENST00000393758 CR1LQ2VPA4 569 aa12.85□□□□□ -0.35
PDZD4-202ENST00000393758 OR4A5Q8NH83 315 aa12.85□□□□□ -0.35
PDZD4-202ENST00000393758 ARHGAP32A7KAX9 2087 aa12.85□□□□□ -0.35
PDZD4-202ENST00000393758 FAM231BA6NCW3 169 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms