RNA–Protein interactions for RNA: ENST00000393196.7

NME1-203, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-203ENST00000393196 NHLH2Q02577 135 aa13.86□□□□□ -0.19
NME1-203ENST00000393196 FCN2Q15485 313 aa13.86□□□□□ -0.19
NME1-203ENST00000393196 ZNF709Q8N972 641 aa13.86□□□□□ -0.19
NME1-203ENST00000393196 ARV1Q9H2C2 271 aa13.86□□□□□ -0.19
NME1-203ENST00000393196 MBD2Q9UBB5 411 aa13.86□□□□□ -0.19
NME1-203ENST00000393196 LYL1P12980 280 aa13.85□□□□□ -0.19
NME1-203ENST00000393196 ATF4P18848 351 aaPredicted RBP13.85□□□□□ -0.19
NME1-203ENST00000393196 RPL12P30050 165 aaKnown RBP13.85□□□□□ -0.19
NME1-203ENST00000393196 PRR20EP86478 221 aa13.85□□□□□ -0.19
NME1-203ENST00000393196 PRR20CP86479 221 aa13.85□□□□□ -0.19
NME1-203ENST00000393196 PRR20DP86480 221 aa13.85□□□□□ -0.19
NME1-203ENST00000393196 PRR20BP86481 221 aa13.85□□□□□ -0.19
NME1-203ENST00000393196 PRR20AP86496 221 aa13.85□□□□□ -0.19
NME1-203ENST00000393196 TMEM41BQ5BJD5 291 aa13.85□□□□□ -0.19
NME1-203ENST00000393196 PSMG4Q5JS54 123 aa13.85□□□□□ -0.19
NME1-203ENST00000393196 C10orf113Q5VZT2 155 aa13.85□□□□□ -0.19
NME1-203ENST00000393196 FAM24BQ8N5W8 94 aa13.85□□□□□ -0.19
NME1-203ENST00000393196 SCRT1Q9BWW7 348 aa13.85□□□□□ -0.19
NME1-203ENST00000393196 SLC25A32Q9H2D1 315 aa13.85□□□□□ -0.19
NME1-203ENST00000393196 DNAJC4Q9NNZ3 241 aa13.85□□□□□ -0.19
NME1-203ENST00000393196 HSPB11Q9Y547 144 aa13.85□□□□□ -0.19
NME1-203ENST00000393196 RPL35AP18077 110 aaKnown RBP13.84□□□□□ -0.19
NME1-203ENST00000393196 B2MP61769 119 aa13.84□□□□□ -0.19
NME1-203ENST00000393196 OPCMLQ14982 345 aa13.84□□□□□ -0.19
NME1-203ENST00000393196 SPATA31B1PQ5VZV4 182 aa13.84□□□□□ -0.19
NME1-203ENST00000393196 OR11H7Q8NGC8 314 aa13.84□□□□□ -0.19
NME1-203ENST00000393196 RSG1Q9BU20 258 aa13.84□□□□□ -0.19
NME1-203ENST00000393196 CSTL1Q9H114 145 aa13.84□□□□□ -0.19
NME1-203ENST00000393196 C17orf112F2Z3M2 114 aa13.83□□□□□ -0.2
NME1-203ENST00000393196 IFNA5P01569 189 aa13.83□□□□□ -0.2
NME1-203ENST00000393196 SPP1P10451 314 aa13.83□□□□□ -0.2
NME1-203ENST00000393196 CLINT1Q14677 625 aa13.83□□□□□ -0.2
NME1-203ENST00000393196 LEMD1Q68G75 181 aa13.83□□□□□ -0.2
NME1-203ENST00000393196 MORN3Q6PF18 240 aaPredicted RBP13.83□□□□□ -0.2
NME1-203ENST00000393196 LINC00305Q7Z4B0 112 aa13.83□□□□□ -0.2
NME1-203ENST00000393196 GATAD1Q8WUU5 269 aa13.83□□□□□ -0.2
NME1-203ENST00000393196 ATP5SQ99766 215 aa13.83□□□□□ -0.2
NME1-203ENST00000393196 SLC39A9Q9NUM3 307 aa13.83□□□□□ -0.2
NME1-203ENST00000393196 MIC13Q5XKP0 118 aa13.82□□□□□ -0.2
NME1-203ENST00000393196 BPIFA4PQ86YQ2 179 aa13.82□□□□□ -0.2
NME1-203ENST00000393196 C16orf92Q96LL3 132 aa13.82□□□□□ -0.2
NME1-203ENST00000393196 UHRF2Q96PU4 802 aa13.82□□□□□ -0.2
NME1-203ENST00000393196 NPCDR1Q9BY65 106 aa13.82□□□□□ -0.2
NME1-203ENST00000393196 PXMP4Q9Y6I8 212 aa13.82□□□□□ -0.2
NME1-203ENST00000393196 SOCS3O14543 225 aa13.81□□□□□ -0.2
NME1-203ENST00000393196 CXCL2P19875 107 aa13.81□□□□□ -0.2
NME1-203ENST00000393196 NUTF2P61970 127 aaKnown RBP13.81□□□□□ -0.2
NME1-203ENST00000393196 ZNF124Q15973 351 aa13.81□□□□□ -0.2
NME1-203ENST00000393196 ACTL10Q5JWF8 245 aa13.81□□□□□ -0.2
NME1-203ENST00000393196 PATE2Q6UY27 113 aa13.81□□□□□ -0.2
NME1-203ENST00000393196 SCGB1C1Q8TD33 95 aa13.81□□□□□ -0.2
NME1-203ENST00000393196 RPRMQ9NS64 109 aa13.81□□□□□ -0.2
NME1-203ENST00000393196 A0A087X0K7 114 aa13.8□□□□□ -0.2
NME1-203ENST00000393196 SPRY2O43597 315 aa13.8□□□□□ -0.2
NME1-203ENST00000393196 FOXI2Q6ZQN5 318 aa13.8□□□□□ -0.2
NME1-203ENST00000393196 TRPT1Q86TN4 253 aaKnown RBP13.8□□□□□ -0.2
NME1-203ENST00000393196 LINC00052Q96N35 136 aa13.8□□□□□ -0.2
NME1-203ENST00000393196 PARD6GQ9BYG4 376 aaPredicted RBP13.8□□□□□ -0.2
NME1-203ENST00000393196 WDR61Q9GZS3 305 aaKnown RBP13.8□□□□□ -0.2
NME1-203ENST00000393196 EBLN2Q6P2I7 272 aa13.79□□□□□ -0.2
NME1-203ENST00000393196 LRRC20Q8TCA0 184 aa13.79□□□□□ -0.2
NME1-203ENST00000393196 TMEM37Q8WXS4 190 aa13.79□□□□□ -0.2
NME1-203ENST00000393196 RNF183Q96D59 192 aa13.79□□□□□ -0.2
NME1-203ENST00000393196 OVOL2Q9BRP0 275 aa13.79□□□□□ -0.2
NME1-203ENST00000393196 CLEC5AQ9NY25 188 aa13.79□□□□□ -0.2
NME1-203ENST00000393196 TENM3Q9P273 2699 aa13.79□□□□□ -0.2
NME1-203ENST00000393196 NBEAL2Q6ZNJ1 2754 aa13.79□□□□□ -0.2
NME1-203ENST00000393196 CA1P00915 261 aaPredicted RBP13.78□□□□□ -0.2
NME1-203ENST00000393196 HLA-DRB4P13762 266 aa13.78□□□□□ -0.2
NME1-203ENST00000393196 GUK1Q16774 197 aa13.78□□□□□ -0.2
NME1-203ENST00000393196 LCN15Q6UWW0 184 aa13.78□□□□□ -0.2
NME1-203ENST00000393196 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.78□□□□□ -0.2
NME1-203ENST00000393196 INO80EQ8NBZ0 244 aaPredicted RBP13.78□□□□□ -0.2
NME1-203ENST00000393196 CLUHP3Q96NS8 147 aa13.78□□□□□ -0.2
NME1-203ENST00000393196 AQP10Q96PS8 301 aa13.78□□□□□ -0.2
NME1-203ENST00000393196 C1QTNF4Q9BXJ3 329 aa13.78□□□□□ -0.2
NME1-203ENST00000393196 HLA-DRB4X5D2U9 266 aa13.78□□□□□ -0.2
NME1-203ENST00000393196 KNCNA6PVL3 124 aa13.77□□□□□ -0.21
NME1-203ENST00000393196 ZNF266Q14584 549 aa13.77□□□□□ -0.21
NME1-203ENST00000393196 DEFB135Q30KP9 77 aa13.77□□□□□ -0.21
NME1-203ENST00000393196 IL17DQ8TAD2 202 aa13.77□□□□□ -0.21
NME1-203ENST00000393196 SLC50A1Q9BRV3 221 aa13.77□□□□□ -0.21
NME1-203ENST00000393196 SAV1Q9H4B6 383 aaPredicted RBP13.77□□□□□ -0.21
NME1-203ENST00000393196 RETNQ9HD89 108 aa13.77□□□□□ -0.21
NME1-203ENST00000393196 H3BMM0 161 aa13.76□□□□□ -0.21
NME1-203ENST00000393196 OR2T35Q8NGX2 323 aa13.76□□□□□ -0.21
NME1-203ENST00000393196 MRPL32Q9BYC8 188 aaKnown RBP13.75□□□□□ -0.21
NME1-203ENST00000393196 SMIM3Q9BZL3 60 aa13.75□□□□□ -0.21
NME1-203ENST00000393196 HRH4Q9H3N8 390 aa13.75□□□□□ -0.21
NME1-203ENST00000393196 EDA2RQ9HAV5 297 aa13.75□□□□□ -0.21
NME1-203ENST00000393196 TMEM14CQ9P0S9 112 aa13.75□□□□□ -0.21
NME1-203ENST00000393196 C3orf84H3BNL1 204 aa13.74□□□□□ -0.21
NME1-203ENST00000393196 MRPS12O15235 138 aaKnown RBP13.74□□□□□ -0.21
NME1-203ENST00000393196 DUSP14O95147 198 aaKnown RBP13.74□□□□□ -0.21
NME1-203ENST00000393196 MUC7Q8TAX7 377 aa13.73□□□□□ -0.21
NME1-203ENST00000393196 C17orf77Q96MU5 243 aa13.73□□□□□ -0.21
NME1-203ENST00000393196 TIMM9Q9Y5J7 89 aa13.73□□□□□ -0.21
NME1-203ENST00000393196 FXYD6-FXYD2A0A087WZ82 144 aa13.72□□□□□ -0.21
NME1-203ENST00000393196 A0A0J9YX75 114 aa13.72□□□□□ -0.21
NME1-203ENST00000393196 ZNF253O75346 499 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms