RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 SCRT1Q9BWW7 348 aa11.93□□□□□ -0.5
CSHL1-204ENST00000392824 SLC25A32Q9H2D1 315 aa11.93□□□□□ -0.5
CSHL1-204ENST00000392824 DNAJC4Q9NNZ3 241 aa11.93□□□□□ -0.5
CSHL1-204ENST00000392824 IFNA5P01569 189 aa11.92□□□□□ -0.5
CSHL1-204ENST00000392824 RPL7P18124 248 aaKnown RBP11.92□□□□□ -0.5
CSHL1-204ENST00000392824 MEOX2P50222 304 aa11.92□□□□□ -0.5
CSHL1-204ENST00000392824 PRR20EP86478 221 aa11.92□□□□□ -0.5
CSHL1-204ENST00000392824 PRR20CP86479 221 aa11.92□□□□□ -0.5
CSHL1-204ENST00000392824 PRR20DP86480 221 aa11.92□□□□□ -0.5
CSHL1-204ENST00000392824 PRR20BP86481 221 aa11.92□□□□□ -0.5
CSHL1-204ENST00000392824 PRR20AP86496 221 aa11.92□□□□□ -0.5
CSHL1-204ENST00000392824 LINC00305Q7Z4B0 112 aa11.92□□□□□ -0.5
CSHL1-204ENST00000392824 STHQ8IWL8 128 aa11.92□□□□□ -0.5
CSHL1-204ENST00000392824 PFDN5Q99471 154 aa11.92□□□□□ -0.5
CSHL1-204ENST00000392824 ATP5SQ99766 215 aa11.92□□□□□ -0.5
CSHL1-204ENST00000392824 SLC39A9Q9NUM3 307 aa11.92□□□□□ -0.5
CSHL1-204ENST00000392824 KIR2DL5BA0A0G2JN68 375 aa11.91□□□□□ -0.5
CSHL1-204ENST00000392824 KIR2DL5BA0A0G2JPC4 375 aa11.91□□□□□ -0.5
CSHL1-204ENST00000392824 UBE2CO00762 179 aa11.91□□□□□ -0.5
CSHL1-204ENST00000392824 ATF4P18848 351 aaPredicted RBP11.91□□□□□ -0.5
CSHL1-204ENST00000392824 OPCMLQ14982 345 aa11.91□□□□□ -0.5
CSHL1-204ENST00000392824 KIR2DL5AQ8N109 375 aa11.91□□□□□ -0.5
CSHL1-204ENST00000392824 KIR2DL5BQ8NHK3 375 aa11.91□□□□□ -0.5
CSHL1-204ENST00000392824 SCGB1C1Q8TD33 95 aa11.91□□□□□ -0.5
CSHL1-204ENST00000392824 C16orf92Q96LL3 132 aa11.91□□□□□ -0.5
CSHL1-204ENST00000392824 LINC00052Q96N35 136 aa11.91□□□□□ -0.5
CSHL1-204ENST00000392824 NPCDR1Q9BY65 106 aa11.91□□□□□ -0.5
CSHL1-204ENST00000392824 SMIM3Q9BZL3 60 aa11.91□□□□□ -0.5
CSHL1-204ENST00000392824 WDR61Q9GZS3 305 aaKnown RBP11.91□□□□□ -0.5
CSHL1-204ENST00000392824 PXMP4Q9Y6I8 212 aa11.91□□□□□ -0.5
CSHL1-204ENST00000392824 COL7A1Q02388 2944 aa11.9□□□□□ -0.5
CSHL1-204ENST00000392824 C17orf112F2Z3M2 114 aa11.9□□□□□ -0.5
CSHL1-204ENST00000392824 TMEM37Q8WXS4 190 aa11.9□□□□□ -0.5
CSHL1-204ENST00000392824 CSTL1Q9H114 145 aa11.9□□□□□ -0.5
CSHL1-204ENST00000392824 KCNIP2Q9NS61 270 aa11.9□□□□□ -0.5
CSHL1-204ENST00000392824 NBEAL2Q6ZNJ1 2754 aa11.9□□□□□ -0.51
CSHL1-204ENST00000392824 KNCNA6PVL3 124 aa11.89□□□□□ -0.51
CSHL1-204ENST00000392824 ISLRO14498 428 aa11.89□□□□□ -0.51
CSHL1-204ENST00000392824 PSMB3P49720 205 aa11.89□□□□□ -0.51
CSHL1-204ENST00000392824 ACTL10Q5JWF8 245 aa11.89□□□□□ -0.51
CSHL1-204ENST00000392824 BPIFA4PQ86YQ2 179 aa11.89□□□□□ -0.51
CSHL1-204ENST00000392824 INO80EQ8NBZ0 244 aaPredicted RBP11.89□□□□□ -0.51
CSHL1-204ENST00000392824 OR2T35Q8NGX2 323 aa11.89□□□□□ -0.51
CSHL1-204ENST00000392824 LRRC20Q8TCA0 184 aa11.89□□□□□ -0.51
CSHL1-204ENST00000392824 Q5BKY6 102 aa11.88□□□□□ -0.51
CSHL1-204ENST00000392824 GATAD1Q8WUU5 269 aa11.88□□□□□ -0.51
CSHL1-204ENST00000392824 RETNQ9HD89 108 aa11.88□□□□□ -0.51
CSHL1-204ENST00000392824 SOCS3O14543 225 aa11.87□□□□□ -0.51
CSHL1-204ENST00000392824 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.87□□□□□ -0.51
CSHL1-204ENST00000392824 Q6ZWC4 215 aa11.87□□□□□ -0.51
CSHL1-204ENST00000392824 WWC2-AS2Q96NR7 200 aa11.87□□□□□ -0.51
CSHL1-204ENST00000392824 FXYD6-FXYD2A0A087WZ82 144 aa11.86□□□□□ -0.51
CSHL1-204ENST00000392824 AQP10Q96PS8 301 aa11.86□□□□□ -0.51
CSHL1-204ENST00000392824 RPRMQ9NS64 109 aa11.86□□□□□ -0.51
CSHL1-204ENST00000392824 HUWE1Q7Z6Z7 4374 aaKnown RBP11.86□□□□□ -0.51
CSHL1-204ENST00000392824 A0A087X0K7 114 aa11.85□□□□□ -0.51
CSHL1-204ENST00000392824 SPRY2O43597 315 aa11.85□□□□□ -0.51
CSHL1-204ENST00000392824 DEFB135Q30KP9 77 aa11.85□□□□□ -0.51
CSHL1-204ENST00000392824 EBLN2Q6P2I7 272 aa11.85□□□□□ -0.51
CSHL1-204ENST00000392824 TRPT1Q86TN4 253 aaKnown RBP11.85□□□□□ -0.51
CSHL1-204ENST00000392824 C17orf77Q96MU5 243 aa11.85□□□□□ -0.51
CSHL1-204ENST00000392824 PARD6GQ9BYG4 376 aaPredicted RBP11.85□□□□□ -0.51
CSHL1-204ENST00000392824 WFDC1Q9HC57 220 aa11.85□□□□□ -0.51
CSHL1-204ENST00000392824 TP53TG1Q9Y2A0 90 aa11.85□□□□□ -0.51
CSHL1-204ENST00000392824 STAB2Q8WWQ8 2551 aa11.85□□□□□ -0.51
CSHL1-204ENST00000392824 TRAV5A0A0B4J249 113 aa11.84□□□□□ -0.51
CSHL1-204ENST00000392824 CA1P00915 261 aaPredicted RBP11.84□□□□□ -0.51
CSHL1-204ENST00000392824 SPP1P10451 314 aa11.84□□□□□ -0.51
CSHL1-204ENST00000392824 NUTF2P61970 127 aaKnown RBP11.84□□□□□ -0.51
CSHL1-204ENST00000392824 ZNF266Q14584 549 aa11.84□□□□□ -0.51
CSHL1-204ENST00000392824 GCSAMLQ5JQS6 135 aa11.84□□□□□ -0.51
CSHL1-204ENST00000392824 FAM78BQ5VT40 261 aa11.84□□□□□ -0.51
CSHL1-204ENST00000392824 MORN5Q5VZ52 161 aa11.84□□□□□ -0.51
CSHL1-204ENST00000392824 SPATA31B1PQ5VZV4 182 aa11.84□□□□□ -0.51
CSHL1-204ENST00000392824 MORN3Q6PF18 240 aaPredicted RBP11.84□□□□□ -0.51
CSHL1-204ENST00000392824 FOXI2Q6ZQN5 318 aa11.84□□□□□ -0.51
CSHL1-204ENST00000392824 OVOL2Q9BRP0 275 aa11.84□□□□□ -0.51
CSHL1-204ENST00000392824 H3BMM0 161 aa11.83□□□□□ -0.52
CSHL1-204ENST00000392824 MRPS12O15235 138 aaKnown RBP11.83□□□□□ -0.52
CSHL1-204ENST00000392824 HLA-DRB4P13762 266 aa11.83□□□□□ -0.52
CSHL1-204ENST00000392824 CXCL2P19875 107 aa11.83□□□□□ -0.52
CSHL1-204ENST00000392824 TMEM41BQ5BJD5 291 aa11.83□□□□□ -0.52
CSHL1-204ENST00000392824 FFAR4Q5NUL3 377 aa11.83□□□□□ -0.52
CSHL1-204ENST00000392824 LCN15Q6UWW0 184 aa11.83□□□□□ -0.52
CSHL1-204ENST00000392824 RNF183Q96D59 192 aa11.83□□□□□ -0.52
CSHL1-204ENST00000392824 SAV1Q9H4B6 383 aaPredicted RBP11.83□□□□□ -0.52
CSHL1-204ENST00000392824 TNFSF18Q9UNG2 199 aa11.83□□□□□ -0.52
CSHL1-204ENST00000392824 HLA-DRB4X5D2U9 266 aa11.83□□□□□ -0.52
CSHL1-204ENST00000392824 SNRPCP09234 159 aaKnown RBP11.82□□□□□ -0.52
CSHL1-204ENST00000392824 GUK1Q16774 197 aa11.82□□□□□ -0.52
CSHL1-204ENST00000392824 IGFL4Q6B9Z1 124 aa11.82□□□□□ -0.52
CSHL1-204ENST00000392824 ZNF738Q8NE65 137 aa11.82□□□□□ -0.52
CSHL1-204ENST00000392824 OR4B1Q8NGF8 309 aa11.82□□□□□ -0.52
CSHL1-204ENST00000392824 C20orf173Q96LM9 149 aa11.82□□□□□ -0.52
CSHL1-204ENST00000392824 SLC50A1Q9BRV3 221 aa11.82□□□□□ -0.52
CSHL1-204ENST00000392824 HRH4Q9H3N8 390 aa11.82□□□□□ -0.52
CSHL1-204ENST00000392824 TRAV8-2A0A0B4J237 113 aa11.81□□□□□ -0.52
CSHL1-204ENST00000392824 IGKV3-20P01619 116 aa11.81□□□□□ -0.52
CSHL1-204ENST00000392824 DEFB1P60022 68 aa11.81□□□□□ -0.52
CSHL1-204ENST00000392824 GDF5OSQ5U4N7 250 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms