RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 RPL27AP46776 148 aaKnown RBP9.83□□□□□ -0.84
CIITA-202ENST00000381835 COMPP49747 757 aaPredicted RBP9.83□□□□□ -0.84
CIITA-202ENST00000381835 CENPWQ5EE01 88 aa9.83□□□□□ -0.84
CIITA-202ENST00000381835 MIR17HGQ75NE6 70 aa9.83□□□□□ -0.84
CIITA-202ENST00000381835 GOLT1BQ9Y3E0 138 aa9.83□□□□□ -0.84
CIITA-202ENST00000381835 BAHCC1Q9P281 2608 aa9.83□□□□□ -0.84
CIITA-202ENST00000381835 H3BUX3 64 aa9.83□□□□□ -0.84
CIITA-202ENST00000381835 CRYBB3P26998 211 aa9.83□□□□□ -0.84
CIITA-202ENST00000381835 LY6EQ16553 131 aa9.83□□□□□ -0.84
CIITA-202ENST00000381835 PIFOQ8TCI5 191 aa9.83□□□□□ -0.84
CIITA-202ENST00000381835 TMEM208Q9BTX3 173 aa9.83□□□□□ -0.84
CIITA-202ENST00000381835 C1RLQ9NZP8 487 aa9.83□□□□□ -0.84
CIITA-202ENST00000381835 NAT8BQ9UHF3 227 aa9.83□□□□□ -0.84
CIITA-202ENST00000381835 OTOGQ6ZRI0 2925 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 FSHBP01225 129 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 KRTDAPP60985 99 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 SSBP2P81877 361 aaPredicted RBP9.82□□□□□ -0.84
CIITA-202ENST00000381835 PRR20EP86478 221 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 PRR20CP86479 221 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 PRR20DP86480 221 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 PRR20BP86481 221 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 PRR20AP86496 221 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 BATFQ16520 125 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 DEFB112Q30KQ8 113 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 PQLC2Q6ZP29 291 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 IL17RELQ6ZVW7 336 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 Q8N9W7 124 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 SRSF12Q8WXF0 261 aaKnown RBP9.82□□□□□ -0.84
CIITA-202ENST00000381835 GNB4Q9HAV0 340 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 TMEM167BQ9NRX6 74 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 SLC45A2Q9UMX9 530 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 A0A1W2PN81 502 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 A6NJY4 79 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 HSBP1L1C9JCN9 74 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 DLEU1O43261 78 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 REG1AP05451 166 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 GPX1P07203 203 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 ERHP84090 104 aaKnown RBP9.82□□□□□ -0.84
CIITA-202ENST00000381835 WT1-ASQ06250 92 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 WDR73Q6P4I2 378 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 RNASE7Q9H1E1 156 aaKnown RBP9.82□□□□□ -0.84
CIITA-202ENST00000381835 ZNF586Q9NXT0 402 aa9.82□□□□□ -0.84
CIITA-202ENST00000381835 MT-ND6P03923 174 aa9.81□□□□□ -0.84
CIITA-202ENST00000381835 LINC00869P0C866 280 aa9.81□□□□□ -0.84
CIITA-202ENST00000381835 CX3CL1P78423 397 aa9.81□□□□□ -0.84
CIITA-202ENST00000381835 FXYD3Q14802 87 aa9.81□□□□□ -0.84
CIITA-202ENST00000381835 RASL11BQ9BPW5 248 aa9.81□□□□□ -0.84
CIITA-202ENST00000381835 SLC25A33Q9BSK2 321 aa9.81□□□□□ -0.84
CIITA-202ENST00000381835 FBXL7Q9UJT9 491 aa9.81□□□□□ -0.84
CIITA-202ENST00000381835 DIRC3C9JPN6 131 aa9.81□□□□□ -0.84
CIITA-202ENST00000381835 SLC35B1P78383 322 aa9.81□□□□□ -0.84
CIITA-202ENST00000381835 KRTAP1-1Q07627 177 aa9.81□□□□□ -0.84
CIITA-202ENST00000381835 KIAA1644Q3SXP7 199 aa9.81□□□□□ -0.84
CIITA-202ENST00000381835 TIGITQ495A1 244 aa9.81□□□□□ -0.84
CIITA-202ENST00000381835 ARL2-SNX15V9GYD0 113 aa9.81□□□□□ -0.84
CIITA-202ENST00000381835 IGLC7A0M8Q6 106 aa9.8□□□□□ -0.84
CIITA-202ENST00000381835 SH2D7A6NKC9 451 aaPredicted RBP9.8□□□□□ -0.84
CIITA-202ENST00000381835 OR7C2O60412 319 aa9.8□□□□□ -0.84
CIITA-202ENST00000381835 OR10J4P0C629 311 aa9.8□□□□□ -0.84
CIITA-202ENST00000381835 OR10J3Q5JRS4 329 aa9.8□□□□□ -0.84
CIITA-202ENST00000381835 YAE1D1Q9NRH1 226 aa9.8□□□□□ -0.84
CIITA-202ENST00000381835 TECRQ9NZ01 308 aaKnown RBP9.8□□□□□ -0.84
CIITA-202ENST00000381835 TEX22C9J3V5 150 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 CD5LO43866 347 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 RNASE2P10153 161 aaKnown RBP9.79□□□□□ -0.84
CIITA-202ENST00000381835 AMTP48728 403 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 TCL1AP56279 114 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 COX19Q49B96 90 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 ZNF562Q6V9R5 426 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 TMEM136Q6ZRR5 245 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 OR4B1Q8NGF8 309 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 RNF2Q99496 336 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 NRN1Q9NPD7 142 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 OSTCQ9NRP0 149 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 RNF114Q9Y508 228 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 FNDC10F2Z333 226 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 ZNF253O75346 499 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 OR5G3P0C626 314 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 PMCHP20382 165 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 SUMO1P63165 101 aaKnown RBP9.79□□□□□ -0.84
CIITA-202ENST00000381835 C19orf35Q6ZS72 473 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 C5orf56Q8N8D9 126 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 KCNS1Q96KK3 526 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 TNFRSF19Q9NS68 423 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 SERTAD4Q9NUC0 356 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 MOB4Q9Y3A3 225 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 MTORP42345 2549 aa9.79□□□□□ -0.84
CIITA-202ENST00000381835 IGHV7-81A0A0B4J1V7 117 aa9.78□□□□□ -0.84
CIITA-202ENST00000381835 INS-IGF2F8WCM5 200 aa9.78□□□□□ -0.84
CIITA-202ENST00000381835 IGHV4-59P01825 116 aa9.78□□□□□ -0.84
CIITA-202ENST00000381835 NPSP0C0P6 89 aa9.78□□□□□ -0.84
CIITA-202ENST00000381835 MGST1P10620 155 aaKnown RBP9.78□□□□□ -0.84
CIITA-202ENST00000381835 GATA2P23769 480 aaPredicted RBP9.78□□□□□ -0.84
CIITA-202ENST00000381835 NDPQ00604 133 aa9.78□□□□□ -0.84
CIITA-202ENST00000381835 C2orf83Q53S99 150 aa9.78□□□□□ -0.84
CIITA-202ENST00000381835 IBA57Q5T440 356 aaKnown RBP9.78□□□□□ -0.84
CIITA-202ENST00000381835 ARPC1AQ92747 370 aa9.78□□□□□ -0.84
CIITA-202ENST00000381835 A0A1W2PS18 150 aa9.78□□□□□ -0.84
CIITA-202ENST00000381835 A6NDX4 124 aa9.78□□□□□ -0.84
CIITA-202ENST00000381835 ISLRO14498 428 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms