RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 FAM90A2PQ658T7 463 aa11.2□□□□□ -0.62
SYNGR1-204ENST00000381535 ATRAIDQ6UW56 229 aa11.2□□□□□ -0.62
SYNGR1-204ENST00000381535 BPIFA4PQ86YQ2 179 aa11.2□□□□□ -0.62
SYNGR1-204ENST00000381535 ZFAND3Q9H8U3 227 aa11.2□□□□□ -0.62
SYNGR1-204ENST00000381535 PEF1Q9UBV8 284 aaKnown RBP11.2□□□□□ -0.62
SYNGR1-204ENST00000381535 RNF24Q9Y225 148 aa11.2□□□□□ -0.62
SYNGR1-204ENST00000381535 CUBNO60494 3623 aa11.2□□□□□ -0.62
SYNGR1-204ENST00000381535 IGHV3OR16-8A0A075B7F1 116 aa11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 ZNF727A8MUV8 499 aa11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 SCO1O75880 301 aa11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 RPLP1P05386 114 aaKnown RBP11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 RNASE1P07998 156 aaKnown RBP11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 SNRPCP09234 159 aaKnown RBP11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 GP9P14770 177 aa11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 NPPCP23582 126 aa11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 SUMO1P63165 101 aaKnown RBP11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 ZNF674Q2M3X9 581 aa11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 FAM74A3Q4VXF1 159 aa11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 FAM209BQ5JX69 171 aa11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 CLRN3Q8NCR9 226 aa11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 BLNKQ8WV28 456 aa11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 RPUSD4Q96CM3 377 aaKnown RBP11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 NKX6-2Q9C056 277 aaPredicted RBP11.19□□□□□ -0.62
SYNGR1-204ENST00000381535 H3BQ15 152 aa11.18□□□□□ -0.62
SYNGR1-204ENST00000381535 NDUFA4O00483 81 aa11.18□□□□□ -0.62
SYNGR1-204ENST00000381535 GGCTO75223 188 aaKnown RBP11.18□□□□□ -0.62
SYNGR1-204ENST00000381535 NDUFB4O95168 129 aa11.18□□□□□ -0.62
SYNGR1-204ENST00000381535 HILS1P60008 231 aa11.18□□□□□ -0.62
SYNGR1-204ENST00000381535 RANP62826 216 aaKnown RBP11.18□□□□□ -0.62
SYNGR1-204ENST00000381535 RNF152Q8N8N0 203 aa11.18□□□□□ -0.62
SYNGR1-204ENST00000381535 OR4F17Q8NGA8 305 aa11.18□□□□□ -0.62
SYNGR1-204ENST00000381535 SPATA3Q8NHX4 192 aa11.18□□□□□ -0.62
SYNGR1-204ENST00000381535 TVP23CQ96ET8 276 aa11.18□□□□□ -0.62
SYNGR1-204ENST00000381535 OR5B12Q96R08 314 aa11.18□□□□□ -0.62
SYNGR1-204ENST00000381535 METTL26Q96S19 204 aa11.18□□□□□ -0.62
SYNGR1-204ENST00000381535 ZNF586Q9NXT0 402 aa11.18□□□□□ -0.62
SYNGR1-204ENST00000381535 CLPSL1A2RUU4 121 aa11.17□□□□□ -0.62
SYNGR1-204ENST00000381535 M0R036 132 aa11.17□□□□□ -0.62
SYNGR1-204ENST00000381535 MRPS12O15235 138 aaKnown RBP11.17□□□□□ -0.62
SYNGR1-204ENST00000381535 RPL15P61313 204 aaKnown RBP11.17□□□□□ -0.62
SYNGR1-204ENST00000381535 TMEM241Q24JQ0 296 aa11.17□□□□□ -0.62
SYNGR1-204ENST00000381535 LCE2DQ5TA82 110 aaPredicted RBP11.17□□□□□ -0.62
SYNGR1-204ENST00000381535 KLHDC1Q8N7A1 406 aa11.17□□□□□ -0.62
SYNGR1-204ENST00000381535 JMJD8Q96S16 334 aa11.17□□□□□ -0.62
SYNGR1-204ENST00000381535 SMIM7Q9BQ49 75 aa11.17□□□□□ -0.62
SYNGR1-204ENST00000381535 NIPSNAP3BQ9BS92 247 aa11.17□□□□□ -0.62
SYNGR1-204ENST00000381535 C20orf24Q9BUV8 137 aa11.17□□□□□ -0.62
SYNGR1-204ENST00000381535 PARLQ9H300 379 aa11.17□□□□□ -0.62
SYNGR1-204ENST00000381535 SCO2A0A1W2PP80 73 aa11.16□□□□□ -0.62
SYNGR1-204ENST00000381535 PGPA6NDG6 321 aa11.16□□□□□ -0.62
SYNGR1-204ENST00000381535 GGTLC3B5MD39 225 aa11.16□□□□□ -0.62
SYNGR1-204ENST00000381535 H3BTX0 84 aa11.16□□□□□ -0.62
SYNGR1-204ENST00000381535 ZNF207O43670 478 aaKnown RBP11.16□□□□□ -0.62
SYNGR1-204ENST00000381535 RPL7P18124 248 aaKnown RBP11.16□□□□□ -0.62
SYNGR1-204ENST00000381535 CRYBB3P26998 211 aa11.16□□□□□ -0.62
SYNGR1-204ENST00000381535 OR8I2Q8N0Y5 310 aa11.16□□□□□ -0.62
SYNGR1-204ENST00000381535 MYOZ3Q8TDC0 251 aa11.16□□□□□ -0.62
SYNGR1-204ENST00000381535 UBE2E2Q96LR5 201 aa11.16□□□□□ -0.62
SYNGR1-204ENST00000381535 ELOVL1Q9BW60 279 aa11.16□□□□□ -0.62
SYNGR1-204ENST00000381535 NAT8Q9UHE5 227 aa11.16□□□□□ -0.62
SYNGR1-204ENST00000381535 BUB3O43684 328 aa11.15□□□□□ -0.62
SYNGR1-204ENST00000381535 IGLC2P0DOY2 106 aa11.15□□□□□ -0.62
SYNGR1-204ENST00000381535 MYCNOSP40205 109 aa11.15□□□□□ -0.62
SYNGR1-204ENST00000381535 FAM106AQ4KMX7 169 aa11.15□□□□□ -0.62
SYNGR1-204ENST00000381535 C11orf52Q96A22 123 aa11.15□□□□□ -0.62
SYNGR1-204ENST00000381535 C16orf95Q9H693 158 aa11.15□□□□□ -0.62
SYNGR1-204ENST00000381535 SDF2L1Q9HCN8 221 aa11.15□□□□□ -0.62
SYNGR1-204ENST00000381535 U3KQE9 123 aa11.15□□□□□ -0.62
SYNGR1-204ENST00000381535 STAB1Q9NY15 2570 aa11.14□□□□□ -0.63
SYNGR1-204ENST00000381535 TRBV19A0A075B6N1 114 aa11.14□□□□□ -0.63
SYNGR1-204ENST00000381535 ZNF320A2RRD8 509 aa11.14□□□□□ -0.63
SYNGR1-204ENST00000381535 C7orf77A4D0Y5 90 aa11.14□□□□□ -0.63
SYNGR1-204ENST00000381535 LGALS1P09382 135 aaKnown RBP11.14□□□□□ -0.63
SYNGR1-204ENST00000381535 AWAT1Q58HT5 328 aa11.14□□□□□ -0.63
SYNGR1-204ENST00000381535 C1orf194Q5T5A4 169 aa11.14□□□□□ -0.63
SYNGR1-204ENST00000381535 UNQ9165/PRO28630Q6UXU0 137 aa11.14□□□□□ -0.63
SYNGR1-204ENST00000381535 GPHB5Q86YW7 130 aa11.14□□□□□ -0.63
SYNGR1-204ENST00000381535 C17orf77Q96MU5 243 aa11.14□□□□□ -0.63
SYNGR1-204ENST00000381535 Q9H3A6 140 aa11.14□□□□□ -0.63
SYNGR1-204ENST00000381535 OTORQ9NRC9 128 aa11.14□□□□□ -0.63
SYNGR1-204ENST00000381535 SMAD5-AS1Q9Y6J3 95 aa11.14□□□□□ -0.63
SYNGR1-204ENST00000381535 IGHV3OR16-13A0A075B7E8 117 aa11.13□□□□□ -0.63
SYNGR1-204ENST00000381535 IGHV3-74A0A0B4J1X5 117 aa11.13□□□□□ -0.63
SYNGR1-204ENST00000381535 IGHV3-66A0A0C4DH42 116 aa11.13□□□□□ -0.63
SYNGR1-204ENST00000381535 HELTA6NFD8 242 aa11.13□□□□□ -0.63
SYNGR1-204ENST00000381535 ZNF785A8K8V0 405 aa11.13□□□□□ -0.63
SYNGR1-204ENST00000381535 APOHP02749 345 aaPredicted RBP11.13□□□□□ -0.63
SYNGR1-204ENST00000381535 SLC25A5P05141 298 aaKnown RBP11.13□□□□□ -0.63
SYNGR1-204ENST00000381535 BTN1A1Q13410 526 aa11.13□□□□□ -0.63
SYNGR1-204ENST00000381535 GPR82Q96P67 336 aa11.13□□□□□ -0.63
SYNGR1-204ENST00000381535 TCEAL7Q9BRU2 100 aa11.13□□□□□ -0.63
SYNGR1-204ENST00000381535 DERL1Q9BUN8 251 aa11.13□□□□□ -0.63
SYNGR1-204ENST00000381535 RPS10P5Q9NQ39 176 aa11.13□□□□□ -0.63
SYNGR1-204ENST00000381535 EPDR1Q9UM22 224 aa11.13□□□□□ -0.63
SYNGR1-204ENST00000381535 IGHV3-49A0A0A0MS15 119 aa11.12□□□□□ -0.63
SYNGR1-204ENST00000381535 ATF4P18848 351 aaPredicted RBP11.12□□□□□ -0.63
SYNGR1-204ENST00000381535 CDX1P47902 265 aaPredicted RBP11.12□□□□□ -0.63
SYNGR1-204ENST00000381535 PNRC1Q12796 327 aaPredicted RBP11.12□□□□□ -0.63
SYNGR1-204ENST00000381535 RPEL1Q2QD12 228 aa11.12□□□□□ -0.63
SYNGR1-204ENST00000381535 LYPD1Q8N2G4 141 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms