RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 SYNGR2O43760 224 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 NDUFB6O95139 128 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 IAPPP10997 89 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 GALR1P47211 349 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 ZFP69Q49AA0 526 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 EBLN2Q6P2I7 272 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 ZNF705AQ6ZN79 300 aaPredicted RBP9.37□□□□□ -0.91
RPAIN-202ENST00000381208 TCTE3Q8IZS6 198 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 LINC00052Q96N35 136 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 GPR82Q96P67 336 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 C20orf85Q9H1P6 137 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 PAIP2BQ9ULR5 123 aaKnown RBP9.37□□□□□ -0.91
RPAIN-202ENST00000381208 IGHV4-4A0A075B6R2 117 aa9.36□□□□□ -0.91
RPAIN-202ENST00000381208 TRAV6A0A075B6T7 132 aa9.36□□□□□ -0.91
RPAIN-202ENST00000381208 PRSS47A8MTI9 375 aa9.36□□□□□ -0.91
RPAIN-202ENST00000381208 AMBPP02760 352 aa9.36□□□□□ -0.91
RPAIN-202ENST00000381208 SPART-AS1P0CW21 52 aa9.36□□□□□ -0.91
RPAIN-202ENST00000381208 CD300CQ08708 224 aa9.36□□□□□ -0.91
RPAIN-202ENST00000381208 S100A7AQ86SG5 101 aa9.36□□□□□ -0.91
RPAIN-202ENST00000381208 ZBTB8BQ8NAP8 495 aaPredicted RBP9.36□□□□□ -0.91
RPAIN-202ENST00000381208 BPIFCQ8NFQ6 507 aa9.36□□□□□ -0.91
RPAIN-202ENST00000381208 OR4D5Q8NGN0 318 aa9.36□□□□□ -0.91
RPAIN-202ENST00000381208 ST6GAL2Q96JF0 529 aa9.36□□□□□ -0.91
RPAIN-202ENST00000381208 MED28Q9H204 178 aa9.36□□□□□ -0.91
RPAIN-202ENST00000381208 DEFB131BA0A096LNP1 70 aa9.35□□□□□ -0.91
RPAIN-202ENST00000381208 ZNF705FA8MVS1 300 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-202ENST00000381208 FAM25EA8MYX2 175 aa9.35□□□□□ -0.91
RPAIN-202ENST00000381208 SOCS3O14543 225 aa9.35□□□□□ -0.91
RPAIN-202ENST00000381208 ZNF705DP0CH99 300 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-202ENST00000381208 ZNF705BP0CI00 300 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-202ENST00000381208 PAX9P55771 341 aa9.35□□□□□ -0.91
RPAIN-202ENST00000381208 PPP1R1AQ13522 171 aa9.35□□□□□ -0.91
RPAIN-202ENST00000381208 OR2F1Q13607 317 aa9.35□□□□□ -0.91
RPAIN-202ENST00000381208 C12orf74Q32Q52 190 aa9.35□□□□□ -0.91
RPAIN-202ENST00000381208 FAM210BQ96KR6 192 aa9.35□□□□□ -0.91
RPAIN-202ENST00000381208 GPN1Q9HCN4 374 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-202ENST00000381208 RPRMQ9NS64 109 aa9.35□□□□□ -0.91
RPAIN-202ENST00000381208 GOLT1BQ9Y3E0 138 aa9.35□□□□□ -0.91
RPAIN-202ENST00000381208 STRAPQ9Y3F4 350 aaKnown RBP9.35□□□□□ -0.91
RPAIN-202ENST00000381208 RFNGQ9Y644 331 aa9.35□□□□□ -0.91
RPAIN-202ENST00000381208 FRAS1Q86XX4 4008 aa9.34□□□□□ -0.91
RPAIN-202ENST00000381208 WRBO00258 174 aa9.34□□□□□ -0.91
RPAIN-202ENST00000381208 IL5P05113 134 aa9.34□□□□□ -0.91
RPAIN-202ENST00000381208 HOXB5P09067 269 aa9.34□□□□□ -0.91
RPAIN-202ENST00000381208 P0DMU3 169 aa9.34□□□□□ -0.91
RPAIN-202ENST00000381208 FAM231AP0DMU4 169 aa9.34□□□□□ -0.91
RPAIN-202ENST00000381208 FAM231CP0DMU5 169 aa9.34□□□□□ -0.91
RPAIN-202ENST00000381208 PSG9Q00887 426 aa9.34□□□□□ -0.91
RPAIN-202ENST00000381208 OR4B1Q8NGF8 309 aa9.34□□□□□ -0.91
RPAIN-202ENST00000381208 OR1B1Q8NGR6 318 aa9.34□□□□□ -0.91
RPAIN-202ENST00000381208 C16orf92Q96LL3 132 aa9.34□□□□□ -0.91
RPAIN-202ENST00000381208 NDUFAF3Q9BU61 184 aa9.34□□□□□ -0.91
RPAIN-202ENST00000381208 TMEM147Q9BVK8 224 aa9.34□□□□□ -0.91
RPAIN-202ENST00000381208 FLVCR2Q9UPI3 526 aa9.34□□□□□ -0.91
RPAIN-202ENST00000381208 RNF24Q9Y225 148 aa9.34□□□□□ -0.91
RPAIN-202ENST00000381208 IGKV1OR2-108A0A075B7D4 117 aa9.33□□□□□ -0.92
RPAIN-202ENST00000381208 ZNF98A6NK75 572 aa9.33□□□□□ -0.92
RPAIN-202ENST00000381208 IFNA21P01568 189 aa9.33□□□□□ -0.92
RPAIN-202ENST00000381208 AKR1C1Q04828 323 aa9.33□□□□□ -0.92
RPAIN-202ENST00000381208 SPANXN5Q5MJ07 72 aa9.33□□□□□ -0.92
RPAIN-202ENST00000381208 LCE1DQ5T752 114 aa9.33□□□□□ -0.92
RPAIN-202ENST00000381208 TMEM144Q7Z5S9 345 aa9.33□□□□□ -0.92
RPAIN-202ENST00000381208 CELA1Q9UNI1 258 aa9.33□□□□□ -0.92
RPAIN-202ENST00000381208 A0A0J9YX75 114 aa9.32□□□□□ -0.92
RPAIN-202ENST00000381208 PRSS46E5RG02 174 aa9.32□□□□□ -0.92
RPAIN-202ENST00000381208 SSNA1O43805 119 aa9.32□□□□□ -0.92
RPAIN-202ENST00000381208 IGKV3-20P01619 116 aa9.32□□□□□ -0.92
RPAIN-202ENST00000381208 HBE1P02100 147 aa9.32□□□□□ -0.92
RPAIN-202ENST00000381208 C1QBP02746 253 aa9.32□□□□□ -0.92
RPAIN-202ENST00000381208 SELENOTP62341 195 aa9.32□□□□□ -0.92
RPAIN-202ENST00000381208 ID3Q02535 119 aa9.32□□□□□ -0.92
RPAIN-202ENST00000381208 GDF5OSQ5U4N7 250 aa9.32□□□□□ -0.92
RPAIN-202ENST00000381208 LINC00336Q6ZUF6 198 aa9.32□□□□□ -0.92
RPAIN-202ENST00000381208 ZNF709Q8N972 641 aa9.32□□□□□ -0.92
RPAIN-202ENST00000381208 MAGT1Q9H0U3 335 aa9.32□□□□□ -0.92
RPAIN-202ENST00000381208 DOK5Q9P104 306 aa9.32□□□□□ -0.92
RPAIN-202ENST00000381208 VPS13DQ5THJ4 4388 aa9.31□□□□□ -0.92
RPAIN-202ENST00000381208 DNAH6Q9C0G6 4158 aa9.31□□□□□ -0.92
RPAIN-202ENST00000381208 C9orf170A2RU37 121 aa9.31□□□□□ -0.92
RPAIN-202ENST00000381208 DUSP14O95147 198 aaKnown RBP9.31□□□□□ -0.92
RPAIN-202ENST00000381208 ORM2P19652 201 aa9.31□□□□□ -0.92
RPAIN-202ENST00000381208 ANXA7P20073 488 aaKnown RBP9.31□□□□□ -0.92
RPAIN-202ENST00000381208 RAP2BP61225 183 aa9.31□□□□□ -0.92
RPAIN-202ENST00000381208 B2MP61769 119 aa9.31□□□□□ -0.92
RPAIN-202ENST00000381208 FAM78BQ5VT40 261 aa9.31□□□□□ -0.92
RPAIN-202ENST00000381208 ACOT7LQ6ZUV0 252 aa9.31□□□□□ -0.92
RPAIN-202ENST00000381208 ASB13Q8WXK3 278 aa9.31□□□□□ -0.92
RPAIN-202ENST00000381208 RSG1Q9BU20 258 aa9.31□□□□□ -0.92
RPAIN-202ENST00000381208 SLC25A32Q9H2D1 315 aa9.31□□□□□ -0.92
RPAIN-202ENST00000381208 SLC25A22Q9H936 323 aa9.31□□□□□ -0.92
RPAIN-202ENST00000381208 DNAH10Q8IVF4 4471 aa9.31□□□□□ -0.92
RPAIN-202ENST00000381208 IGHV3OR16-12A0A075B7B8 117 aa9.3□□□□□ -0.92
RPAIN-202ENST00000381208 A8MTW9 85 aa9.3□□□□□ -0.92
RPAIN-202ENST00000381208 FNDC10F2Z333 226 aa9.3□□□□□ -0.92
RPAIN-202ENST00000381208 OR4E1P0C645 316 aa9.3□□□□□ -0.92
RPAIN-202ENST00000381208 RPL7P18124 248 aaKnown RBP9.3□□□□□ -0.92
RPAIN-202ENST00000381208 RRN3P1Q2M238 152 aa9.3□□□□□ -0.92
RPAIN-202ENST00000381208 POM121L12Q8N7R1 296 aa9.3□□□□□ -0.92
RPAIN-202ENST00000381208 HYLS1Q96M11 299 aa9.3□□□□□ -0.92
RPAIN-202ENST00000381208 NIPSNAP3BQ9BS92 247 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms