RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 TMEM167AQ8TBQ9 72 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 SCRT1Q9BWW7 348 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 MPV17L2Q567V2 206 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 ZFAND6Q6FIF0 208 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 RNF182Q8N6D2 247 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 RHOGP84095 191 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 ZNF672Q499Z4 452 aaPredicted RBP9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 BCL6BQ8N143 479 aaPredicted RBP9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 CD28P10747 220 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 QRFPP83859 136 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 CR1LQ2VPA4 569 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 ORMDL2Q53FV1 153 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 RUSC1-AS1Q66K80 236 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 IGHV1-46P01743 117 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 NMSQ5H8A3 153 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 C10orf55Q5SWW7 151 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 RPP25LQ8N5L8 163 aaKnown RBP9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 CYSLTR1Q9Y271 337 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 POLR3KQ9Y2Y1 108 aaPredicted RBP9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 MBD3L4A6NDZ8 208 aaPredicted RBP9.83□□□□□ -0.84
PCDHA9-201ENST00000378122 MBD3L3A6NE82 208 aaPredicted RBP9.83□□□□□ -0.84
PCDHA9-201ENST00000378122 MBD3L5A6NJ08 208 aaPredicted RBP9.83□□□□□ -0.84
PCDHA9-201ENST00000378122 RPL15P61313 204 aaKnown RBP9.83□□□□□ -0.84
PCDHA9-201ENST00000378122 CD177Q8N6Q3 437 aa9.83□□□□□ -0.84
PCDHA9-201ENST00000378122 MBD3L2Q8NHZ7 208 aaPredicted RBP9.83□□□□□ -0.84
PCDHA9-201ENST00000378122 TIMM23O14925 209 aa9.83□□□□□ -0.84
PCDHA9-201ENST00000378122 RASL11AQ6T310 242 aa9.83□□□□□ -0.84
PCDHA9-201ENST00000378122 MCRIP2Q9BUT9 160 aaKnown RBP9.83□□□□□ -0.84
PCDHA9-201ENST00000378122 MYLKQ15746 1914 aa9.83□□□□□ -0.84
PCDHA9-201ENST00000378122 SIGLEC15Q6ZMC9 328 aa9.83□□□□□ -0.84
PCDHA9-201ENST00000378122 GTSF1LQ9H1H1 148 aa9.83□□□□□ -0.84
PCDHA9-201ENST00000378122 IGLV2-23P01705 113 aa9.83□□□□□ -0.84
PCDHA9-201ENST00000378122 MST1LQ2TV78 715 aa9.83□□□□□ -0.84
PCDHA9-201ENST00000378122 MAJINQ3KP22 176 aa9.83□□□□□ -0.84
PCDHA9-201ENST00000378122 INS-IGF2F8WCM5 200 aa9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 INSP01308 110 aa9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 SELLP14151 372 aa9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 LINC00205P59089 165 aa9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 LYZL1Q6UWQ5 148 aa9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 MPDZO75970 2070 aa9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 PMS2P5A8MQ11 134 aa9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 SLC25A39Q9BZJ4 359 aaPredicted RBP9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 PPBPP02775 128 aa9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 MRPL52Q86TS9 123 aaKnown RBP9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 MBNL3Q9NUK0 354 aaKnown RBP9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 KIR3DS1Q14943 382 aa9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 SCN5AQ14524 2016 aa9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 TMEM200BQ69YZ2 307 aa9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 ERG28Q9UKR5 140 aa9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 SLC25A15Q9Y619 301 aa9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 FAM90A2PQ658T7 463 aa9.82□□□□□ -0.84
PCDHA9-201ENST00000378122 F2Z2F3 143 aa9.81□□□□□ -0.84
PCDHA9-201ENST00000378122 SYS1-DBNDD2H3BUS1 97 aa9.81□□□□□ -0.84
PCDHA9-201ENST00000378122 NTF4P34130 210 aa9.81□□□□□ -0.84
PCDHA9-201ENST00000378122 DTX2Q86UW9 622 aa9.81□□□□□ -0.84
PCDHA9-201ENST00000378122 C9JQL5 133 aa9.81□□□□□ -0.84
PCDHA9-201ENST00000378122 PSPNO60542 156 aa9.81□□□□□ -0.84
PCDHA9-201ENST00000378122 TCRAP04437 139 aa9.81□□□□□ -0.84
PCDHA9-201ENST00000378122 SLC25A16P16260 332 aa9.81□□□□□ -0.84
PCDHA9-201ENST00000378122 ZNF407Q9C0G0 2248 aa9.81□□□□□ -0.84
PCDHA9-201ENST00000378122 A0A087WX48 190 aa9.81□□□□□ -0.84
PCDHA9-201ENST00000378122 A8MWP6 167 aa9.81□□□□□ -0.84
PCDHA9-201ENST00000378122 M0R2P5 195 aa9.81□□□□□ -0.84
PCDHA9-201ENST00000378122 SH2D1AO60880 128 aa9.81□□□□□ -0.84
PCDHA9-201ENST00000378122 CST9LQ9H4G1 147 aa9.81□□□□□ -0.84
PCDHA9-201ENST00000378122 ZNF138P52744 262 aa9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 KIAA2026Q5HYC2 2103 aa9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 SMPXQ9UHP9 88 aa9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 RPUSD1Q9UJJ7 312 aaKnown RBP9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 EP300Q09472 2414 aaPredicted RBP9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 A0A0G2JRQ6 117 aa9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 LINC00473A8K010 186 aa9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 C1orf122Q6ZSJ8 110 aa9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 KIF26BQ2KJY2 2108 aa9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 IGHV2-26A0A0B4J1V2 119 aa9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 TMEM14EPQ6UXP3 125 aa9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 COX11Q9Y6N1 276 aa9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 TRGV1A0A0A0MS02 117 aa9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 A0A1B0GUS0 222 aa9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 PLXNA3P51805 1871 aa9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 PHLDA1Q8WV24 401 aaPredicted RBP9.8□□□□□ -0.84
PCDHA9-201ENST00000378122 SLC25A48Q6ZT89 311 aaKnown RBP9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 GAGE2BQ13066 116 aa9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 ATXN8Q156A1 80 aa9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 GAGE2EQ4V326 116 aa9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 GAGE2DQ9UEU5 116 aa9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 FREM3P0C091 2139 aa9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 GAGE12BA1L429 117 aa9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 ADARB2-AS1A8MUL3 147 aa9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 IGFL4Q6B9Z1 124 aa9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 Q6P435 159 aa9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 RPRMLQ8N4K4 120 aa9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 SMKR1H3BMG3 65 aa9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 TET1Q8NFU7 2136 aa9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 MRPL27Q9P0M9 148 aaKnown RBP9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 F5H768 121 aa9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 PAX8Q06710 450 aa9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 PIP4P2Q8N4L2 257 aa9.79□□□□□ -0.84
PCDHA9-201ENST00000378122 ZNF474Q6S9Z5 364 aaPredicted RBP9.78□□□□□ -0.84
PCDHA9-201ENST00000378122 SPSB3Q6PJ21 355 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms