RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 RNASEKQ6P5S7 137 aaKnown RBP8.64□□□□□ -1.03
BEST1-201ENST00000378043 RNF5Q99942 180 aa8.64□□□□□ -1.03
BEST1-201ENST00000378043 FAM90A27PA6NNH2 459 aa8.64□□□□□ -1.03
BEST1-201ENST00000378043 M0QZ24 198 aa8.64□□□□□ -1.03
BEST1-201ENST00000378043 PRB4P10163 310 aaPredicted RBP8.64□□□□□ -1.03
BEST1-201ENST00000378043 FOXA3P55318 350 aaPredicted RBP8.64□□□□□ -1.03
BEST1-201ENST00000378043 FOXC1Q12948 553 aa8.64□□□□□ -1.03
BEST1-201ENST00000378043 PLGLAQ15195 96 aa8.64□□□□□ -1.03
BEST1-201ENST00000378043 GOLT1AQ6ZVE7 132 aa8.64□□□□□ -1.03
BEST1-201ENST00000378043 SPATA12Q7Z6I5 190 aa8.64□□□□□ -1.03
BEST1-201ENST00000378043 OR8B3Q8NGG8 313 aa8.64□□□□□ -1.03
BEST1-201ENST00000378043 OR8B2Q96RD0 313 aa8.64□□□□□ -1.03
BEST1-201ENST00000378043 ONECUT1Q9UBC0 465 aa8.64□□□□□ -1.03
BEST1-201ENST00000378043 WNK2Q9Y3S1 2297 aa8.64□□□□□ -1.03
BEST1-201ENST00000378043 SH2D7A6NKC9 451 aaPredicted RBP8.63□□□□□ -1.03
BEST1-201ENST00000378043 M0R2Z0 102 aa8.63□□□□□ -1.03
BEST1-201ENST00000378043 APOHP02749 345 aaPredicted RBP8.63□□□□□ -1.03
BEST1-201ENST00000378043 ZNF25P17030 456 aaPredicted RBP8.63□□□□□ -1.03
BEST1-201ENST00000378043 FAM120AOSQ5T036 256 aa8.63□□□□□ -1.03
BEST1-201ENST00000378043 RBPMS2Q6ZRY4 209 aaKnown RBP8.63□□□□□ -1.03
BEST1-201ENST00000378043 CFHR4Q92496 578 aa8.63□□□□□ -1.03
BEST1-201ENST00000378043 GFRA4Q9GZZ7 299 aa8.63□□□□□ -1.03
BEST1-201ENST00000378043 CNIH1O95406 144 aa8.63□□□□□ -1.03
BEST1-201ENST00000378043 LIPFP07098 398 aa8.63□□□□□ -1.03
BEST1-201ENST00000378043 KLF17Q5JT82 389 aaPredicted RBP8.63□□□□□ -1.03
BEST1-201ENST00000378043 C16orf54Q6UWD8 224 aa8.63□□□□□ -1.03
BEST1-201ENST00000378043 PRNTQ86SH4 94 aa8.63□□□□□ -1.03
BEST1-201ENST00000378043 BCL6BQ8N143 479 aaPredicted RBP8.63□□□□□ -1.03
BEST1-201ENST00000378043 ZNF491Q8N8L2 437 aa8.63□□□□□ -1.03
BEST1-201ENST00000378043 RBM14Q96PK6 669 aaKnown RBP8.63□□□□□ -1.03
BEST1-201ENST00000378043 ASCL2Q99929 193 aa8.63□□□□□ -1.03
BEST1-201ENST00000378043 SHANK2-AS3Q9BTD1 123 aa8.63□□□□□ -1.03
BEST1-201ENST00000378043 SCNM1Q9BWG6 230 aa8.63□□□□□ -1.03
BEST1-201ENST00000378043 HILPDAQ9Y5L2 63 aa8.63□□□□□ -1.03
BEST1-201ENST00000378043 TRBV19A0A075B6N1 114 aa8.62□□□□□ -1.03
BEST1-201ENST00000378043 ARF6P62330 175 aa8.62□□□□□ -1.03
BEST1-201ENST00000378043 PMCHL1Q16048 86 aa8.62□□□□□ -1.03
BEST1-201ENST00000378043 BATFQ16520 125 aa8.62□□□□□ -1.03
BEST1-201ENST00000378043 FBXL19-AS1Q494R0 122 aa8.62□□□□□ -1.03
BEST1-201ENST00000378043 DAZAP1Q96EP5 407 aaKnown RBP8.62□□□□□ -1.03
BEST1-201ENST00000378043 SRSF8Q9BRL6 282 aaKnown RBP8.62□□□□□ -1.03
BEST1-201ENST00000378043 TMEM208Q9BTX3 173 aa8.62□□□□□ -1.03
BEST1-201ENST00000378043 LPAR2Q9HBW0 351 aa8.62□□□□□ -1.03
BEST1-201ENST00000378043 UQCR10Q9UDW1 63 aa8.62□□□□□ -1.03
BEST1-201ENST00000378043 SOX21Q9Y651 276 aaPredicted RBP8.62□□□□□ -1.03
BEST1-201ENST00000378043 MAP1AP78559 2803 aaPredicted RBP8.62□□□□□ -1.03
BEST1-201ENST00000378043 MRPS12O15235 138 aaKnown RBP8.62□□□□□ -1.03
BEST1-201ENST00000378043 COL8A1P27658 744 aa8.62□□□□□ -1.03
BEST1-201ENST00000378043 HTR1DP28221 377 aa8.62□□□□□ -1.03
BEST1-201ENST00000378043 SIGLEC15Q6ZMC9 328 aa8.62□□□□□ -1.03
BEST1-201ENST00000378043 OR11H6Q8NGC7 330 aa8.62□□□□□ -1.03
BEST1-201ENST00000378043 CLEC5AQ9NY25 188 aa8.62□□□□□ -1.03
BEST1-201ENST00000378043 S4R3C0 116 aa8.62□□□□□ -1.03
BEST1-201ENST00000378043 ZFHX3Q15911 3703 aa8.61□□□□□ -1.03
BEST1-201ENST00000378043 FAM231BA6NCW3 169 aa8.61□□□□□ -1.03
BEST1-201ENST00000378043 H3BRN7 92 aa8.61□□□□□ -1.03
BEST1-201ENST00000378043 NBR2O15453 112 aa8.61□□□□□ -1.03
BEST1-201ENST00000378043 TFPI2P48307 235 aa8.61□□□□□ -1.03
BEST1-201ENST00000378043 KLRD1Q13241 179 aa8.61□□□□□ -1.03
BEST1-201ENST00000378043 Q56UQ5 140 aa8.61□□□□□ -1.03
BEST1-201ENST00000378043 ZC2HC1AQ96GY0 325 aa8.61□□□□□ -1.03
BEST1-201ENST00000378043 AKAP6Q13023 2319 aa8.61□□□□□ -1.03
BEST1-201ENST00000378043 CACNA1BQ00975 2339 aa8.61□□□□□ -1.03
BEST1-201ENST00000378043 DPM3Q9P2X0 92 aa8.61□□□□□ -1.03
BEST1-201ENST00000378043 LOC102724200A0A096LPH7 203 aaPredicted RBP8.6□□□□□ -1.03
BEST1-201ENST00000378043 TRBV6-1A0A0K0K1D8 114 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 NDUFA3O95167 84 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 Q6ZN92 141 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 LINC00173Q6ZV60 143 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 BPIFA4PQ86YQ2 179 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 NPBQ8NG41 125 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 RNF125Q96EQ8 232 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 IL4P05112 153 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 CRIP1P50238 77 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 STPG4Q8N801 248 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 FANCD2OSQ96PS1 177 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 SPTBN1Q01082 2364 aaKnown RBP8.6□□□□□ -1.03
BEST1-201ENST00000378043 IGHV1-24A0A0C4DH33 117 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 WI2-2373I1.2A0A1W2PRP0 233 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 F8W735 103 aaPredicted RBP8.6□□□□□ -1.03
BEST1-201ENST00000378043 M0R3E3 92 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 HAX1O00165 279 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 DLEU1O43261 78 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 IGLL1P15814 213 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 TMEM75Q8N9X5 138 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 ZNF414Q96IQ9 312 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 TXN2Q99757 166 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 NDFIP1Q9BT67 221 aa8.6□□□□□ -1.03
BEST1-201ENST00000378043 TRAV9-2A0A087WT02 112 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 A0A1W2PRD5 423 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 A0A1W2PRF3 423 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 A0A1W2PRM7 423 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 ODF3BA8MYP8 253 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 CRXO43186 299 aaPredicted RBP8.59□□□□□ -1.03
BEST1-201ENST00000378043 HLA-DRB1P01911 266 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 NPSP0C0P6 89 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 ZNF138P52744 262 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 SPTAN1Q13813 2472 aaKnown RBP8.59□□□□□ -1.03
BEST1-201ENST00000378043 COL6A6A6NMZ7 2263 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 CCL21O00585 134 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms