RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 HIGD1AQ9Y241 93 aa12.87□□□□□ -0.35
IRF3-202ENST00000377135 IGHV3OR16-12A0A075B7B8 117 aa12.86□□□□□ -0.35
IRF3-202ENST00000377135 L7N2F9 121 aa12.86□□□□□ -0.35
IRF3-202ENST00000377135 H2AFB2P0C5Z0 115 aa12.86□□□□□ -0.35
IRF3-202ENST00000377135 LINC00869P0C866 280 aa12.86□□□□□ -0.35
IRF3-202ENST00000377135 TCTAP57738 103 aa12.86□□□□□ -0.35
IRF3-202ENST00000377135 VAMP2P63027 116 aa12.86□□□□□ -0.35
IRF3-202ENST00000377135 FGL1Q08830 312 aa12.86□□□□□ -0.35
IRF3-202ENST00000377135 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.86□□□□□ -0.35
IRF3-202ENST00000377135 SEC22CQ9BRL7 303 aa12.86□□□□□ -0.35
IRF3-202ENST00000377135 SHANK2-AS3Q9BTD1 123 aa12.86□□□□□ -0.35
IRF3-202ENST00000377135 RCL1Q9Y2P8 373 aaKnown RBP12.86□□□□□ -0.35
IRF3-202ENST00000377135 A0A0J9YX75 114 aa12.85□□□□□ -0.35
IRF3-202ENST00000377135 C5orf51A6NDU8 294 aa12.85□□□□□ -0.35
IRF3-202ENST00000377135 DEDDO75618 318 aa12.85□□□□□ -0.35
IRF3-202ENST00000377135 PLP1P60201 277 aa12.85□□□□□ -0.35
IRF3-202ENST00000377135 ARL16Q0P5N6 197 aa12.85□□□□□ -0.35
IRF3-202ENST00000377135 ZNF705AQ6ZN79 300 aaPredicted RBP12.85□□□□□ -0.35
IRF3-202ENST00000377135 Q6ZTC4 211 aa12.85□□□□□ -0.35
IRF3-202ENST00000377135 S100A7AQ86SG5 101 aa12.85□□□□□ -0.35
IRF3-202ENST00000377135 C12orf45Q8N5I9 185 aaPredicted RBP12.85□□□□□ -0.35
IRF3-202ENST00000377135 NEU1Q99519 415 aa12.85□□□□□ -0.35
IRF3-202ENST00000377135 GGACTQ9BVM4 153 aa12.85□□□□□ -0.35
IRF3-202ENST00000377135 ARL6Q9H0F7 186 aa12.85□□□□□ -0.35
IRF3-202ENST00000377135 SLC35B3Q9H1N7 401 aa12.85□□□□□ -0.35
IRF3-202ENST00000377135 TRAV10A0A0B4J240 114 aa12.84□□□□□ -0.35
IRF3-202ENST00000377135 FAM240BA0A1B0GVZ2 78 aa12.84□□□□□ -0.35
IRF3-202ENST00000377135 SMIM9A6NGZ8 99 aa12.84□□□□□ -0.35
IRF3-202ENST00000377135 H3BRN7 92 aa12.84□□□□□ -0.35
IRF3-202ENST00000377135 GOSR2O14653 212 aa12.84□□□□□ -0.35
IRF3-202ENST00000377135 RPL7P18124 248 aaKnown RBP12.84□□□□□ -0.35
IRF3-202ENST00000377135 IGFL4Q6B9Z1 124 aa12.84□□□□□ -0.35
IRF3-202ENST00000377135 LINC00299Q6ZSB3 139 aa12.84□□□□□ -0.35
IRF3-202ENST00000377135 ZNF709Q8N972 641 aa12.84□□□□□ -0.35
IRF3-202ENST00000377135 LSM5Q9Y4Y9 91 aaKnown RBP12.84□□□□□ -0.35
IRF3-202ENST00000377135 ZNF705FA8MVS1 300 aaPredicted RBP12.83□□□□□ -0.36
IRF3-202ENST00000377135 K7EPK0 472 aa12.83□□□□□ -0.36
IRF3-202ENST00000377135 ZNF705DP0CH99 300 aaPredicted RBP12.83□□□□□ -0.36
IRF3-202ENST00000377135 ZNF705BP0CI00 300 aaPredicted RBP12.83□□□□□ -0.36
IRF3-202ENST00000377135 BCAP31P51572 246 aa12.83□□□□□ -0.36
IRF3-202ENST00000377135 EMP1P54849 157 aa12.83□□□□□ -0.36
IRF3-202ENST00000377135 SLC38A11Q08AI6 406 aa12.83□□□□□ -0.36
IRF3-202ENST00000377135 C12orf74Q32Q52 190 aa12.83□□□□□ -0.36
IRF3-202ENST00000377135 MZT2BQ6NZ67 158 aa12.83□□□□□ -0.36
IRF3-202ENST00000377135 RPP25LQ8N5L8 163 aaKnown RBP12.83□□□□□ -0.36
IRF3-202ENST00000377135 C2orf50Q96LR7 162 aa12.83□□□□□ -0.36
IRF3-202ENST00000377135 UHRF2Q96PU4 802 aa12.83□□□□□ -0.36
IRF3-202ENST00000377135 APLNQ9ULZ1 77 aa12.83□□□□□ -0.36
IRF3-202ENST00000377135 CELA1Q9UNI1 258 aa12.83□□□□□ -0.36
IRF3-202ENST00000377135 PATE2Q6UY27 113 aa12.82□□□□□ -0.36
IRF3-202ENST00000377135 ZNF767PQ75MW2 155 aa12.82□□□□□ -0.36
IRF3-202ENST00000377135 S100ZQ8WXG8 99 aa12.82□□□□□ -0.36
IRF3-202ENST00000377135 GOLT1BQ9Y3E0 138 aa12.82□□□□□ -0.36
IRF3-202ENST00000377135 TRAV8-2A0A0B4J237 113 aa12.81□□□□□ -0.36
IRF3-202ENST00000377135 AGPAT2O15120 278 aa12.81□□□□□ -0.36
IRF3-202ENST00000377135 PXDC1Q5TGL8 231 aa12.81□□□□□ -0.36
IRF3-202ENST00000377135 RNF182Q8N6D2 247 aa12.81□□□□□ -0.36
IRF3-202ENST00000377135 LRRC20Q8TCA0 184 aa12.81□□□□□ -0.36
IRF3-202ENST00000377135 ARV1Q9H2C2 271 aa12.81□□□□□ -0.36
IRF3-202ENST00000377135 RNF24Q9Y225 148 aa12.81□□□□□ -0.36
IRF3-202ENST00000377135 RFNGQ9Y644 331 aa12.81□□□□□ -0.36
IRF3-202ENST00000377135 TMEM189A5PLL7 270 aa12.8□□□□□ -0.36
IRF3-202ENST00000377135 DUSP14O95147 198 aaKnown RBP12.8□□□□□ -0.36
IRF3-202ENST00000377135 SPART-AS1P0CW21 52 aa12.8□□□□□ -0.36
IRF3-202ENST00000377135 CAV2P51636 162 aa12.8□□□□□ -0.36
IRF3-202ENST00000377135 ZNF546Q86UE3 836 aa12.8□□□□□ -0.36
IRF3-202ENST00000377135 C1orf158Q8N1D5 194 aa12.8□□□□□ -0.36
IRF3-202ENST00000377135 DEFB131BA0A096LNP1 70 aa12.79□□□□□ -0.36
IRF3-202ENST00000377135 FAM24AA6NFZ4 105 aa12.79□□□□□ -0.36
IRF3-202ENST00000377135 CST7O76096 145 aa12.79□□□□□ -0.36
IRF3-202ENST00000377135 PVALBP20472 110 aaPredicted RBP12.79□□□□□ -0.36
IRF3-202ENST00000377135 CNN1P51911 297 aaKnown RBP12.79□□□□□ -0.36
IRF3-202ENST00000377135 RAB31Q13636 194 aa12.79□□□□□ -0.36
IRF3-202ENST00000377135 HBE1P02100 147 aa12.79□□□□□ -0.36
IRF3-202ENST00000377135 AMTNQ6UX39 209 aa12.79□□□□□ -0.36
IRF3-202ENST00000377135 LINC00305Q7Z4B0 112 aa12.79□□□□□ -0.36
IRF3-202ENST00000377135 ZNF738Q8NE65 137 aa12.79□□□□□ -0.36
IRF3-202ENST00000377135 MGST2Q99735 147 aa12.79□□□□□ -0.36
IRF3-202ENST00000377135 KMT2AQ03164 3969 aa12.78□□□□□ -0.36
IRF3-202ENST00000377135 IGHV4-4A0A075B6R2 117 aa12.78□□□□□ -0.36
IRF3-202ENST00000377135 A8MTW9 85 aa12.78□□□□□ -0.36
IRF3-202ENST00000377135 ASAH1Q13510 395 aa12.78□□□□□ -0.36
IRF3-202ENST00000377135 PSG3Q16557 428 aa12.78□□□□□ -0.36
IRF3-202ENST00000377135 IGF2BP2-AS1Q96M15 143 aa12.78□□□□□ -0.36
IRF3-202ENST00000377135 TMEM208Q9BTX3 173 aa12.78□□□□□ -0.36
IRF3-202ENST00000377135 RNF126Q9BV68 326 aa12.78□□□□□ -0.36
IRF3-202ENST00000377135 C11orf1Q9H5F2 150 aa12.78□□□□□ -0.36
IRF3-202ENST00000377135 A0A087X0K7 114 aa12.77□□□□□ -0.37
IRF3-202ENST00000377135 COX7A2P2O60397 106 aa12.77□□□□□ -0.37
IRF3-202ENST00000377135 AMBPP02760 352 aa12.77□□□□□ -0.37
IRF3-202ENST00000377135 CXCL3P19876 107 aa12.77□□□□□ -0.37
IRF3-202ENST00000377135 CAMLGP49069 296 aa12.77□□□□□ -0.37
IRF3-202ENST00000377135 S100A10P60903 97 aa12.77□□□□□ -0.37
IRF3-202ENST00000377135 PRR20EP86478 221 aa12.77□□□□□ -0.37
IRF3-202ENST00000377135 PRR20CP86479 221 aa12.77□□□□□ -0.37
IRF3-202ENST00000377135 PRR20DP86480 221 aa12.77□□□□□ -0.37
IRF3-202ENST00000377135 PRR20BP86481 221 aa12.77□□□□□ -0.37
IRF3-202ENST00000377135 PRR20AP86496 221 aa12.77□□□□□ -0.37
IRF3-202ENST00000377135 IL15RAQ13261 267 aa12.77□□□□□ -0.37
IRF3-202ENST00000377135 Q6ZRG5 221 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms