RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 KIR2DL5BA0A0G2JN68 375 aa11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 KIR2DL5BA0A0G2JPC4 375 aa11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 KIR2DL5AQ8N109 375 aa11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 COL25A1Q9BXS0 654 aaPredicted RBP11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 OTORQ9NRC9 128 aa11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 DPM3Q9P2X0 92 aa11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 TRAV8-6A0A0B4J262 113 aa11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 TIMM23O14925 209 aa11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 IGLL1P15814 213 aa11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 RNF125Q96EQ8 232 aa11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 UBTD1Q9HAC8 227 aa11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 A1L4Q6 167 aa11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 GPR183P32249 361 aa11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 CCDC144NLQ6NUI1 221 aa11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 TP73-AS1Q9UF72 201 aa11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 RABAC1Q9UI14 185 aa11.95□□□□□ -0.5
UBQLN1-202ENST00000376395 APOBEC3AP31941 199 aaPredicted RBP11.94□□□□□ -0.5
UBQLN1-202ENST00000376395 CACNG7P62955 275 aa11.94□□□□□ -0.5
UBQLN1-202ENST00000376395 AMMECR1LQ6DCA0 310 aa11.94□□□□□ -0.5
UBQLN1-202ENST00000376395 C8orf46Q8TAG6 207 aa11.94□□□□□ -0.5
UBQLN1-202ENST00000376395 ACACBO00763 2458 aa11.94□□□□□ -0.5
UBQLN1-202ENST00000376395 NPIPB5A8MRT5 1133 aa11.94□□□□□ -0.5
UBQLN1-202ENST00000376395 TMEM160Q9NX00 188 aa11.94□□□□□ -0.5
UBQLN1-202ENST00000376395 PEF1Q9UBV8 284 aaKnown RBP11.94□□□□□ -0.5
UBQLN1-202ENST00000376395 SCGB1C2P0DMR2 95 aa11.94□□□□□ -0.5
UBQLN1-202ENST00000376395 PLP1P60201 277 aa11.94□□□□□ -0.5
UBQLN1-202ENST00000376395 ORMDL3Q8N138 153 aa11.94□□□□□ -0.5
UBQLN1-202ENST00000376395 C11orf52Q96A22 123 aa11.94□□□□□ -0.5
UBQLN1-202ENST00000376395 C21orf62Q9NYP8 219 aa11.94□□□□□ -0.5
UBQLN1-202ENST00000376395 IGHV3OR16-10A0A075B7F0 116 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 H3BUT2 72 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 NCR2O95944 276 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 IGHV1-8P0DP01 117 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 HTN1P15515 57 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 SRSF9Q13242 221 aaKnown RBP eCLIP11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 ADIPOQQ15848 244 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 SLC25A39Q9BZJ4 359 aaPredicted RBP11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 SOX21Q9Y651 276 aaPredicted RBP11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 NCOR2Q9Y618 2525 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 ARHGAP32A7KAX9 2087 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 TMEM178BH3BS89 294 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 FABP2P12104 132 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 KHDC1LQ5JSQ8 128 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 NDUFA4L2Q9NRX3 87 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 B9A039 149 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 IGLV1-44P01699 117 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 ZNF502Q8TBZ5 544 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 SPRY4Q9C004 299 aa11.93□□□□□ -0.5
UBQLN1-202ENST00000376395 LOC105371242A0A075B767 164 aa11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 MBD3L4A6NDZ8 208 aaPredicted RBP11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 MBD3L3A6NE82 208 aaPredicted RBP11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 MBD3L5A6NJ08 208 aaPredicted RBP11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 LINC00173Q6ZV60 143 aa11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 MBD3L2Q8NHZ7 208 aaPredicted RBP11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 SYS1-DBNDD2H3BUS1 97 aa11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 ATP5L2Q7Z4Y8 100 aa11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 C16orf92Q96LL3 132 aa11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 MRPL36Q9P0J6 103 aaKnown RBP11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 TP53TG3Q9ULZ0 132 aa11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 PTPRQQ9UMZ3 2332 aa11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 K7EM74 188 aa11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 MRPL27Q9P0M9 148 aaKnown RBP11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 DKK4Q9UBT3 224 aa11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 IGHV2-26A0A0B4J1V2 119 aa11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 Q8TAT8 98 aa11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 RITA1Q96K30 269 aa11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 RNF114Q9Y508 228 aa11.92□□□□□ -0.5
UBQLN1-202ENST00000376395 IGKV2-40A0A087WW87 121 aaPredicted RBP11.91□□□□□ -0.5
UBQLN1-202ENST00000376395 IGKV2D-40P01614 121 aaPredicted RBP11.91□□□□□ -0.5
UBQLN1-202ENST00000376395 ARMS2P0C7Q2 107 aa11.91□□□□□ -0.5
UBQLN1-202ENST00000376395 SAPCD1Q5SSQ6 148 aa11.91□□□□□ -0.5
UBQLN1-202ENST00000376395 FER1L6-AS1Q8NA97 138 aa11.91□□□□□ -0.5
UBQLN1-202ENST00000376395 TRAV30A0A087WSZ9 112 aa11.91□□□□□ -0.5
UBQLN1-202ENST00000376395 SMKR1H3BMG3 65 aa11.91□□□□□ -0.5
UBQLN1-202ENST00000376395 EVI2AP22794 236 aa11.91□□□□□ -0.5
UBQLN1-202ENST00000376395 TMPRSS3P57727 454 aa11.91□□□□□ -0.5
UBQLN1-202ENST00000376395 EBLN2Q6P2I7 272 aa11.91□□□□□ -0.5
UBQLN1-202ENST00000376395 Q1RN00 199 aa11.91□□□□□ -0.5
UBQLN1-202ENST00000376395 COL6A3P12111 3177 aa11.91□□□□□ -0.5
UBQLN1-202ENST00000376395 D6R8Y8 96 aa11.9□□□□□ -0.5
UBQLN1-202ENST00000376395 PSG9Q00887 426 aa11.9□□□□□ -0.5
UBQLN1-202ENST00000376395 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.9□□□□□ -0.5
UBQLN1-202ENST00000376395 ST20Q9HBF5 79 aa11.9□□□□□ -0.5
UBQLN1-202ENST00000376395 FAM215AQ9Y5M1 114 aa11.9□□□□□ -0.5
UBQLN1-202ENST00000376395 KLRD1Q13241 179 aa11.9□□□□□ -0.5
UBQLN1-202ENST00000376395 DEFB104AQ8WTQ1 72 aa11.9□□□□□ -0.5
UBQLN1-202ENST00000376395 DDB2Q92466 427 aa11.9□□□□□ -0.5
UBQLN1-202ENST00000376395 ZNF503Q96F45 646 aa11.9□□□□□ -0.5
UBQLN1-202ENST00000376395 SIGLEC9Q9Y336 463 aa11.9□□□□□ -0.5
UBQLN1-202ENST00000376395 IGHV1-3A0A0C4DH29 117 aa11.9□□□□□ -0.5
UBQLN1-202ENST00000376395 FOXC2Q99958 501 aa11.9□□□□□ -0.5
UBQLN1-202ENST00000376395 A0A0G2JNJ9 132 aa11.89□□□□□ -0.51
UBQLN1-202ENST00000376395 SMIM27A0A1W2PRY6 76 aa11.89□□□□□ -0.51
UBQLN1-202ENST00000376395 NBR2O15453 112 aa11.89□□□□□ -0.51
UBQLN1-202ENST00000376395 PET117Q6UWS5 81 aa11.89□□□□□ -0.51
UBQLN1-202ENST00000376395 OR5AN1Q8NGI8 311 aa11.89□□□□□ -0.51
UBQLN1-202ENST00000376395 CHCHD1Q96BP2 118 aaKnown RBP11.89□□□□□ -0.51
UBQLN1-202ENST00000376395 HIST1H4GQ99525 98 aa11.89□□□□□ -0.51
UBQLN1-202ENST00000376395 Q9UFV3 132 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms