RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 IGKV1-17P01599 117 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 AMY1AP04745 511 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 IGLC1P0CG04 106 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 KRTDAPP60985 99 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 FBXL19-AS1Q494R0 122 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 FAM71F2Q6NXP2 309 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 HSPB9Q9BQS6 159 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 C19orf24Q9BVV8 132 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 SLC25A39Q9BZJ4 359 aaPredicted RBP9.31□□□□□ -0.92
PDE6C-201ENST00000371447 ZNF331Q9NQX6 463 aaPredicted RBP9.31□□□□□ -0.92
PDE6C-201ENST00000371447 C9JCJ5 164 aa9.3□□□□□ -0.92
PDE6C-201ENST00000371447 FOXA3P55318 350 aaPredicted RBP9.3□□□□□ -0.92
PDE6C-201ENST00000371447 ATP5IP56385 69 aaPredicted RBP9.3□□□□□ -0.92
PDE6C-201ENST00000371447 LINC00322Q6ZN03 302 aaPredicted RBP9.3□□□□□ -0.92
PDE6C-201ENST00000371447 PGLYRP4Q96LB8 373 aa9.3□□□□□ -0.92
PDE6C-201ENST00000371447 CRYGBP07316 175 aa9.3□□□□□ -0.92
PDE6C-201ENST00000371447 RPL19P84098 196 aaKnown RBP9.3□□□□□ -0.92
PDE6C-201ENST00000371447 TNFRSF14Q92956 283 aa9.3□□□□□ -0.92
PDE6C-201ENST00000371447 DAZAP1Q96EP5 407 aaKnown RBP9.3□□□□□ -0.92
PDE6C-201ENST00000371447 SOX21Q9Y651 276 aaPredicted RBP9.3□□□□□ -0.92
PDE6C-201ENST00000371447 NAV2Q8IVL1 2488 aa9.3□□□□□ -0.92
PDE6C-201ENST00000371447 HIGD1CA8MV81 97 aa9.3□□□□□ -0.92
PDE6C-201ENST00000371447 EREGO14944 169 aa9.3□□□□□ -0.92
PDE6C-201ENST00000371447 DLEU1O43261 78 aa9.3□□□□□ -0.92
PDE6C-201ENST00000371447 TYMSP04818 313 aa9.3□□□□□ -0.92
PDE6C-201ENST00000371447 PRTN3P24158 256 aa9.3□□□□□ -0.92
PDE6C-201ENST00000371447 TOMM20LQ6UXN7 152 aa9.3□□□□□ -0.92
PDE6C-201ENST00000371447 C8orf31Q8N9H6 132 aa9.3□□□□□ -0.92
PDE6C-201ENST00000371447 TMEM116Q8NCL8 245 aa9.3□□□□□ -0.92
PDE6C-201ENST00000371447 K7EIM0 57 aa9.29□□□□□ -0.92
PDE6C-201ENST00000371447 M0QZ24 198 aa9.29□□□□□ -0.92
PDE6C-201ENST00000371447 C5orf64Q2M2E5 130 aa9.29□□□□□ -0.92
PDE6C-201ENST00000371447 THAP8Q8NA92 274 aa9.29□□□□□ -0.92
PDE6C-201ENST00000371447 RNASE8Q8TDE3 154 aaKnown RBP9.29□□□□□ -0.92
PDE6C-201ENST00000371447 ZNF586Q9NXT0 402 aa9.29□□□□□ -0.92
PDE6C-201ENST00000371447 LINC01548A6NM66 108 aa9.29□□□□□ -0.92
PDE6C-201ENST00000371447 G3V318 75 aa9.29□□□□□ -0.92
PDE6C-201ENST00000371447 GOSR1O95249 250 aa9.29□□□□□ -0.92
PDE6C-201ENST00000371447 SMIM15Q7Z3B0 74 aa9.29□□□□□ -0.92
PDE6C-201ENST00000371447 GBGT1Q8N5D6 347 aa9.29□□□□□ -0.92
PDE6C-201ENST00000371447 C8orf46Q8TAG6 207 aa9.29□□□□□ -0.92
PDE6C-201ENST00000371447 ARPC1AQ92747 370 aa9.29□□□□□ -0.92
PDE6C-201ENST00000371447 NOL4LQ96MY1 436 aaPredicted RBP9.29□□□□□ -0.92
PDE6C-201ENST00000371447 RCHY1Q96PM5 261 aa9.29□□□□□ -0.92
PDE6C-201ENST00000371447 RNF2Q99496 336 aa9.29□□□□□ -0.92
PDE6C-201ENST00000371447 LY6LH3BQJ8 138 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 I3L2K1 104 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 GCGP01275 180 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 OR5R1Q8NH85 324 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 VN1R17PQ8TDU5 208 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 NEU4Q8WWR8 484 aaPredicted RBP9.28□□□□□ -0.92
PDE6C-201ENST00000371447 IGF2BP2-AS1Q96M15 143 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 TRGV9Q99603 122 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 CDC42EP3Q9UKI2 254 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 DOPEY1Q5JWR5 2465 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 NOTCH3Q9UM47 2321 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 NDUFB8O95169 186 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 AMTP48728 403 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 SLAQ13239 276 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 TDRG1Q3Y452 100 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 LBHQ53QV2 105 aaPredicted RBP9.28□□□□□ -0.92
PDE6C-201ENST00000371447 C11orf71Q6IPW1 123 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 ZNF664Q8N3J9 261 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 CLEC5AQ9NY25 188 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 PRB1P04280 392 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 PKIAP61925 76 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 ATOH7Q8N100 152 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 TP53TG3Q9ULZ0 132 aa9.28□□□□□ -0.92
PDE6C-201ENST00000371447 MYO9AB2RTY4 2548 aa9.27□□□□□ -0.92
PDE6C-201ENST00000371447 SAA4P35542 130 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 JOSD1Q15040 202 aaPredicted RBP9.27□□□□□ -0.93
PDE6C-201ENST00000371447 LY6EQ16553 131 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 LY6G5BQ8NDX9 201 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 NUP35Q8NFH5 326 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 ITLN2Q8WWU7 325 aaPredicted RBP9.27□□□□□ -0.93
PDE6C-201ENST00000371447 CFHR4Q92496 578 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 RNF125Q96EQ8 232 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 PAM16Q9Y3D7 125 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 H0Y8G0 127 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 FSTL3O95633 263 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 APCSP02743 223 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 CRYGCP07315 174 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 COL8A1P27658 744 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 GPR183P32249 361 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 PMCHL1Q16048 86 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 UNQ5815/PRO19632Q6UWF5 114 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 TBX15Q96SF7 602 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 OSTCQ9NRP0 149 aa9.27□□□□□ -0.93
PDE6C-201ENST00000371447 TMEM238C9JI98 176 aa9.26□□□□□ -0.93
PDE6C-201ENST00000371447 P01737 135 aa9.26□□□□□ -0.93
PDE6C-201ENST00000371447 TCRAP04437 139 aa9.26□□□□□ -0.93
PDE6C-201ENST00000371447 GP9P14770 177 aa9.26□□□□□ -0.93
PDE6C-201ENST00000371447 HOXB4P17483 251 aaPredicted RBP9.26□□□□□ -0.93
PDE6C-201ENST00000371447 MAPK1IP1LQ8NDC0 245 aa9.26□□□□□ -0.93
PDE6C-201ENST00000371447 CSN3P07498 182 aa9.26□□□□□ -0.93
PDE6C-201ENST00000371447 HLA-DMBP28068 263 aa9.26□□□□□ -0.93
PDE6C-201ENST00000371447 SIGLECL1Q8N7X8 197 aa9.26□□□□□ -0.93
PDE6C-201ENST00000371447 OR4F17Q8NGA8 305 aa9.26□□□□□ -0.93
PDE6C-201ENST00000371447 OR11H6Q8NGC7 330 aa9.26□□□□□ -0.93
PDE6C-201ENST00000371447 FBXL7Q9UJT9 491 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms