RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 CAMLGP49069 296 aa11.11□□□□□ -0.63
SS18L1-202ENST00000370848 APOC4P55056 127 aa11.11□□□□□ -0.63
SS18L1-202ENST00000370848 BAXQ07812 192 aa11.11□□□□□ -0.63
SS18L1-202ENST00000370848 DEFB135Q30KP9 77 aa11.11□□□□□ -0.63
SS18L1-202ENST00000370848 MIC13Q5XKP0 118 aa11.11□□□□□ -0.63
SS18L1-202ENST00000370848 OR11H7Q8NGC8 314 aa11.11□□□□□ -0.63
SS18L1-202ENST00000370848 SHANK2-AS3Q9BTD1 123 aa11.11□□□□□ -0.63
SS18L1-202ENST00000370848 MBD2Q9UBB5 411 aa11.11□□□□□ -0.63
SS18L1-202ENST00000370848 FBXL17Q9UF56 701 aa11.11□□□□□ -0.63
SS18L1-202ENST00000370848 DNAH10Q8IVF4 4471 aa11.1□□□□□ -0.63
SS18L1-202ENST00000370848 FGF7P21781 194 aa11.1□□□□□ -0.63
SS18L1-202ENST00000370848 RAP2BP61225 183 aa11.1□□□□□ -0.63
SS18L1-202ENST00000370848 HBG1P69891 147 aa11.1□□□□□ -0.63
SS18L1-202ENST00000370848 HBG2P69892 147 aa11.1□□□□□ -0.63
SS18L1-202ENST00000370848 CLINT1Q14677 625 aa11.1□□□□□ -0.63
SS18L1-202ENST00000370848 RGS21Q2M5E4 152 aa11.1□□□□□ -0.63
SS18L1-202ENST00000370848 ACTL10Q5JWF8 245 aa11.1□□□□□ -0.63
SS18L1-202ENST00000370848 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.1□□□□□ -0.63
SS18L1-202ENST00000370848 OR5C1Q8NGR4 320 aa11.1□□□□□ -0.63
SS18L1-202ENST00000370848 ARV1Q9H2C2 271 aa11.1□□□□□ -0.63
SS18L1-202ENST00000370848 NUPR2A6NF83 97 aa11.09□□□□□ -0.63
SS18L1-202ENST00000370848 OXA1LQ15070 435 aa11.09□□□□□ -0.63
SS18L1-202ENST00000370848 MORN5Q5VZ52 161 aa11.09□□□□□ -0.63
SS18L1-202ENST00000370848 TRPT1Q86TN4 253 aaKnown RBP11.09□□□□□ -0.63
SS18L1-202ENST00000370848 THAP6Q8TBB0 222 aa11.09□□□□□ -0.63
SS18L1-202ENST00000370848 TMEM37Q8WXS4 190 aa11.09□□□□□ -0.63
SS18L1-202ENST00000370848 C20orf173Q96LM9 149 aa11.09□□□□□ -0.63
SS18L1-202ENST00000370848 RSG1Q9BU20 258 aa11.09□□□□□ -0.63
SS18L1-202ENST00000370848 SLC25A31Q9H0C2 315 aa11.09□□□□□ -0.63
SS18L1-202ENST00000370848 MED28Q9H204 178 aa11.09□□□□□ -0.63
SS18L1-202ENST00000370848 VPS13DQ5THJ4 4388 aa11.08□□□□□ -0.64
SS18L1-202ENST00000370848 GALR1P47211 349 aa11.08□□□□□ -0.64
SS18L1-202ENST00000370848 SNRPD3P62318 126 aaKnown RBP11.08□□□□□ -0.64
SS18L1-202ENST00000370848 PRR20EP86478 221 aa11.08□□□□□ -0.64
SS18L1-202ENST00000370848 PRR20CP86479 221 aa11.08□□□□□ -0.64
SS18L1-202ENST00000370848 PRR20DP86480 221 aa11.08□□□□□ -0.64
SS18L1-202ENST00000370848 PRR20BP86481 221 aa11.08□□□□□ -0.64
SS18L1-202ENST00000370848 PRR20AP86496 221 aa11.08□□□□□ -0.64
SS18L1-202ENST00000370848 OPCMLQ14982 345 aa11.08□□□□□ -0.64
SS18L1-202ENST00000370848 ATP6V1FQ16864 119 aa11.08□□□□□ -0.64
SS18L1-202ENST00000370848 IGFL4Q6B9Z1 124 aa11.08□□□□□ -0.64
SS18L1-202ENST00000370848 STHQ8IWL8 128 aa11.08□□□□□ -0.64
SS18L1-202ENST00000370848 RNF183Q96D59 192 aa11.08□□□□□ -0.64
SS18L1-202ENST00000370848 LINC00052Q96N35 136 aa11.08□□□□□ -0.64
SS18L1-202ENST00000370848 CSTL1Q9H114 145 aa11.08□□□□□ -0.64
SS18L1-202ENST00000370848 HECTD4Q9Y4D8 3996 aa11.07□□□□□ -0.64
SS18L1-202ENST00000370848 DNAH6Q9C0G6 4158 aa11.07□□□□□ -0.64
SS18L1-202ENST00000370848 SPRY2O43597 315 aa11.07□□□□□ -0.64
SS18L1-202ENST00000370848 COX7A2P2O60397 106 aa11.07□□□□□ -0.64
SS18L1-202ENST00000370848 CA1P00915 261 aaPredicted RBP11.07□□□□□ -0.64
SS18L1-202ENST00000370848 SNRPCP09234 159 aaKnown RBP11.07□□□□□ -0.64
SS18L1-202ENST00000370848 GIG44P09565 113 aaPredicted RBP11.07□□□□□ -0.64
SS18L1-202ENST00000370848 C4BPBP20851 252 aa11.07□□□□□ -0.64
SS18L1-202ENST00000370848 GDF5OSQ5U4N7 250 aa11.07□□□□□ -0.64
SS18L1-202ENST00000370848 LINC00305Q7Z4B0 112 aa11.07□□□□□ -0.64
SS18L1-202ENST00000370848 SMIM3Q9BZL3 60 aa11.07□□□□□ -0.64
SS18L1-202ENST00000370848 HSPB11Q9Y547 144 aa11.07□□□□□ -0.64
SS18L1-202ENST00000370848 TRAV8-2A0A0B4J237 113 aa11.06□□□□□ -0.64
SS18L1-202ENST00000370848 A0A0J9YWU9 116 aa11.06□□□□□ -0.64
SS18L1-202ENST00000370848 F6UB75 175 aa11.06□□□□□ -0.64
SS18L1-202ENST00000370848 MRPS12O15235 138 aaKnown RBP11.06□□□□□ -0.64
SS18L1-202ENST00000370848 PET100P0DJ07 73 aa11.06□□□□□ -0.64
SS18L1-202ENST00000370848 PRB4P10163 310 aaPredicted RBP11.06□□□□□ -0.64
SS18L1-202ENST00000370848 PSMB3P49720 205 aa11.06□□□□□ -0.64
SS18L1-202ENST00000370848 B2MP61769 119 aa11.06□□□□□ -0.64
SS18L1-202ENST00000370848 FGL1Q08830 312 aa11.06□□□□□ -0.64
SS18L1-202ENST00000370848 RAB31Q13636 194 aa11.06□□□□□ -0.64
SS18L1-202ENST00000370848 Q5BKY6 102 aa11.06□□□□□ -0.64
SS18L1-202ENST00000370848 GCSAMLQ5JQS6 135 aa11.06□□□□□ -0.64
SS18L1-202ENST00000370848 PXDC1Q5TGL8 231 aa11.06□□□□□ -0.64
SS18L1-202ENST00000370848 CEMP1Q6PRD7 247 aaPredicted RBP11.06□□□□□ -0.64
SS18L1-202ENST00000370848 C16orf92Q96LL3 132 aa11.06□□□□□ -0.64
SS18L1-202ENST00000370848 NPCDR1Q9BY65 106 aa11.06□□□□□ -0.64
SS18L1-202ENST00000370848 SEPSECSQ9HD40 501 aaKnown RBP11.06□□□□□ -0.64
SS18L1-202ENST00000370848 SLC39A9Q9NUM3 307 aa11.06□□□□□ -0.64
SS18L1-202ENST00000370848 PXMP4Q9Y6I8 212 aa11.06□□□□□ -0.64
SS18L1-202ENST00000370848 HERC2O95714 4834 aa11.05□□□□□ -0.64
SS18L1-202ENST00000370848 TRAV5A0A0B4J249 113 aa11.05□□□□□ -0.64
SS18L1-202ENST00000370848 HLA-DMBP28068 263 aa11.05□□□□□ -0.64
SS18L1-202ENST00000370848 RPL12P30050 165 aaKnown RBP11.05□□□□□ -0.64
SS18L1-202ENST00000370848 RPL29P47914 159 aaKnown RBP11.05□□□□□ -0.64
SS18L1-202ENST00000370848 C10orf113Q5VZT2 155 aa11.05□□□□□ -0.64
SS18L1-202ENST00000370848 GPR82Q96P67 336 aa11.05□□□□□ -0.64
SS18L1-202ENST00000370848 WFDC1Q9HC57 220 aa11.05□□□□□ -0.64
SS18L1-202ENST00000370848 H3BMM0 161 aa11.04□□□□□ -0.64
SS18L1-202ENST00000370848 H3BTX0 84 aa11.04□□□□□ -0.64
SS18L1-202ENST00000370848 ISLRO14498 428 aa11.04□□□□□ -0.64
SS18L1-202ENST00000370848 IGKV3-20P01619 116 aa11.04□□□□□ -0.64
SS18L1-202ENST00000370848 RPL7P18124 248 aaKnown RBP11.04□□□□□ -0.64
SS18L1-202ENST00000370848 S100A7P31151 101 aa11.04□□□□□ -0.64
SS18L1-202ENST00000370848 ID1P41134 155 aa11.04□□□□□ -0.64
SS18L1-202ENST00000370848 Q6ZRG5 221 aa11.04□□□□□ -0.64
SS18L1-202ENST00000370848 RNF182Q8N6D2 247 aa11.04□□□□□ -0.64
SS18L1-202ENST00000370848 CHAC2Q8WUX2 184 aa11.04□□□□□ -0.64
SS18L1-202ENST00000370848 ATP5SQ99766 215 aa11.04□□□□□ -0.64
SS18L1-202ENST00000370848 WDR61Q9GZS3 305 aaKnown RBP11.04□□□□□ -0.64
SS18L1-202ENST00000370848 DNAJC4Q9NNZ3 241 aa11.04□□□□□ -0.64
SS18L1-202ENST00000370848 AGRNO00468 2067 aa11.04□□□□□ -0.64
SS18L1-202ENST00000370848 A0A087X0K7 114 aa11.03□□□□□ -0.64
SS18L1-202ENST00000370848 HLA-DRB4P13762 266 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms