RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 VKORC1Q9BQB6 163 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 TEX48A0A1B0GUV7 120 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 PROB1E7EW31 1015 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 PFN1P07737 140 aaKnown RBP7.35□□□□□ -1.23
SYNE1-209ENST00000367257 VDAC2P45880 294 aaPredicted RBP7.35□□□□□ -1.23
SYNE1-209ENST00000367257 SRSF2Q01130 221 aaKnown RBP7.35□□□□□ -1.23
SYNE1-209ENST00000367257 CLEC19AQ6UXS0 136 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 STHQ8IWL8 128 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 CHAC1Q9BUX1 264 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 UNC13CQ8NB66 2214 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 TRGV2A0A075B6R0 118 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 IGKV1D-43A0A0B4J1Z2 117 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 IGKV1D-13A0A0B4J2D9 117 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 LILRA1O75019 489 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 WNT2P09544 360 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 IGKV1-13P0DP09 117 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 BSPH1Q075Z2 132 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 SIGLEC15Q6ZMC9 328 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 RNASE7Q9H1E1 156 aaKnown RBP7.35□□□□□ -1.23
SYNE1-209ENST00000367257 NLRC5Q86WI3 1866 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 TOMM40O96008 361 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 CD7P09564 240 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 SPINK2P20155 84 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 PAX8Q06710 450 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 LYZL4Q96KX0 146 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 TCRAP04437 139 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 INAFM2P0DMQ5 153 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 ZNF319Q9P2F9 582 aa7.35□□□□□ -1.23
SYNE1-209ENST00000367257 ZNF638Q14966 1978 aaKnown RBP7.34□□□□□ -1.23
SYNE1-209ENST00000367257 MYMXA0A1B0GTQ4 84 aa7.34□□□□□ -1.23
SYNE1-209ENST00000367257 ZNF138P52744 262 aa7.34□□□□□ -1.23
SYNE1-209ENST00000367257 C2orf82Q6UX34 121 aa7.34□□□□□ -1.23
SYNE1-209ENST00000367257 LY6EQ16553 131 aa7.34□□□□□ -1.23
SYNE1-209ENST00000367257 FAM90A2PQ658T7 463 aa7.34□□□□□ -1.23
SYNE1-209ENST00000367257 ABCA4P78363 2273 aa7.34□□□□□ -1.23
SYNE1-209ENST00000367257 H3BTX0 84 aa7.34□□□□□ -1.23
SYNE1-209ENST00000367257 THBDP07204 575 aa7.34□□□□□ -1.23
SYNE1-209ENST00000367257 ANXA2RQ3ZCQ2 193 aa7.34□□□□□ -1.23
SYNE1-209ENST00000367257 C20orf204Q6ZNR8 217 aa7.34□□□□□ -1.23
SYNE1-209ENST00000367257 ADARB2-AS1A8MUL3 147 aa7.34□□□□□ -1.24
SYNE1-209ENST00000367257 RFPL3SP0C7P2 107 aa7.34□□□□□ -1.24
SYNE1-209ENST00000367257 FDCSPQ8NFU4 85 aa7.34□□□□□ -1.24
SYNE1-209ENST00000367257 FLVCR1-AS1Q8TAF5 88 aa7.34□□□□□ -1.24
SYNE1-209ENST00000367257 TMEM141Q96I45 108 aa7.34□□□□□ -1.24
SYNE1-209ENST00000367257 GPHA2Q96T91 129 aa7.34□□□□□ -1.24
SYNE1-209ENST00000367257 IGLL1P15814 213 aa7.33□□□□□ -1.24
SYNE1-209ENST00000367257 RPL36AP83881 106 aaKnown RBP7.33□□□□□ -1.24
SYNE1-209ENST00000367257 IL17RELQ6ZVW7 336 aa7.33□□□□□ -1.24
SYNE1-209ENST00000367257 RPL36ALQ969Q0 106 aaKnown RBP7.33□□□□□ -1.24
SYNE1-209ENST00000367257 SIGLEC12Q96PQ1 595 aa7.33□□□□□ -1.24
SYNE1-209ENST00000367257 VGLL1Q99990 258 aa7.33□□□□□ -1.24
SYNE1-209ENST00000367257 ZNHIT1O43257 154 aa7.33□□□□□ -1.24
SYNE1-209ENST00000367257 NDUFB8O95169 186 aa7.33□□□□□ -1.24
SYNE1-209ENST00000367257 SUPT4H1P63272 117 aaKnown RBP7.33□□□□□ -1.24
SYNE1-209ENST00000367257 COA6Q5JTJ3 125 aaKnown RBP7.33□□□□□ -1.24
SYNE1-209ENST00000367257 C8orf86Q6ZUL3 223 aa7.33□□□□□ -1.24
SYNE1-209ENST00000367257 ITLN2Q8WWU7 325 aaPredicted RBP7.33□□□□□ -1.24
SYNE1-209ENST00000367257 CACNA1BQ00975 2339 aa7.33□□□□□ -1.24
SYNE1-209ENST00000367257 TGFBR3LH3BV60 316 aa7.33□□□□□ -1.24
SYNE1-209ENST00000367257 RHODO00212 210 aa7.33□□□□□ -1.24
SYNE1-209ENST00000367257 GFRA3O60609 400 aa7.33□□□□□ -1.24
SYNE1-209ENST00000367257 TAL2Q16559 108 aa7.33□□□□□ -1.24
SYNE1-209ENST00000367257 ZFP36L1Q07352 338 aaKnown RBP7.33□□□□□ -1.24
SYNE1-209ENST00000367257 TIAF1O95411 115 aa7.32□□□□□ -1.24
SYNE1-209ENST00000367257 CD55P08174 381 aa7.32□□□□□ -1.24
SYNE1-209ENST00000367257 DUX4L9Q6RFH8 374 aaPredicted RBP7.32□□□□□ -1.24
SYNE1-209ENST00000367257 COLCA1Q6ZS62 124 aa7.32□□□□□ -1.24
SYNE1-209ENST00000367257 V9GYY9 64 aa7.32□□□□□ -1.24
SYNE1-209ENST00000367257 TRAV41A0A0B4J266 112 aa7.32□□□□□ -1.24
SYNE1-209ENST00000367257 ZNF114Q8NC26 417 aa7.32□□□□□ -1.24
SYNE1-209ENST00000367257 GFI1Q99684 422 aa7.32□□□□□ -1.24
SYNE1-209ENST00000367257 A0A1B0GUS0 222 aa7.32□□□□□ -1.24
SYNE1-209ENST00000367257 C9JAW5 83 aa7.32□□□□□ -1.24
SYNE1-209ENST00000367257 TFF2Q03403 129 aa7.32□□□□□ -1.24
SYNE1-209ENST00000367257 TMEM75Q8N9X5 138 aa7.32□□□□□ -1.24
SYNE1-209ENST00000367257 NABP1Q96AH0 204 aa7.32□□□□□ -1.24
SYNE1-209ENST00000367257 A0A0A6YYD4 124 aa7.32□□□□□ -1.24
SYNE1-209ENST00000367257 COX8AP10176 69 aa7.32□□□□□ -1.24
SYNE1-209ENST00000367257 ANAPC10Q9UM13 185 aa7.32□□□□□ -1.24
SYNE1-209ENST00000367257 LEPROTO15243 131 aa7.31□□□□□ -1.24
SYNE1-209ENST00000367257 HAPLN4Q86UW8 402 aa7.31□□□□□ -1.24
SYNE1-209ENST00000367257 C17orf82Q86X59 251 aaPredicted RBP7.31□□□□□ -1.24
SYNE1-209ENST00000367257 C7orf69Q9H7B7 122 aa7.31□□□□□ -1.24
SYNE1-209ENST00000367257 TOMM7Q9P0U1 55 aa7.31□□□□□ -1.24
SYNE1-209ENST00000367257 H3BMM0 161 aa7.31□□□□□ -1.24
SYNE1-209ENST00000367257 IGLC1P0CG04 106 aa7.31□□□□□ -1.24
SYNE1-209ENST00000367257 HIST1H4AP62805 103 aaKnown RBP7.31□□□□□ -1.24
SYNE1-209ENST00000367257 UTF1Q5T230 341 aa7.31□□□□□ -1.24
SYNE1-209ENST00000367257 FAM231DQ6ZW35 169 aa7.31□□□□□ -1.24
SYNE1-209ENST00000367257 C9orf106Q8NAJ2 232 aa7.31□□□□□ -1.24
SYNE1-209ENST00000367257 UBE2WQ96B02 151 aa7.31□□□□□ -1.24
SYNE1-209ENST00000367257 PTPRDP23468 1912 aa7.31□□□□□ -1.24
SYNE1-209ENST00000367257 NTN3O00634 580 aaPredicted RBP7.31□□□□□ -1.24
SYNE1-209ENST00000367257 GNG5P63218 68 aa7.31□□□□□ -1.24
SYNE1-209ENST00000367257 OR11H6Q8NGC7 330 aa7.31□□□□□ -1.24
SYNE1-209ENST00000367257 TRGV4A0A0C4DH28 118 aa7.3□□□□□ -1.24
SYNE1-209ENST00000367257 IGHV1-18A0A0C4DH31 117 aa7.3□□□□□ -1.24
SYNE1-209ENST00000367257 PNRC2Q9NPJ4 139 aaKnown RBP7.3□□□□□ -1.24
SYNE1-209ENST00000367257 CABIN1Q9Y6J0 2220 aa7.3□□□□□ -1.24
SYNE1-209ENST00000367257 DMDP11532 3685 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms