RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 IGHV3-64A0A075B6Q5 118 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 A0A087WWC5 75 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 TRAV5A0A0B4J249 113 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 LEPROTO15243 131 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 SNAI2O43623 268 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 RPL23P62829 140 aaKnown RBP8.91□□□□□ -0.98
CLIP1-203ENST00000361654 CTAG1AP78358 180 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 CHCHD1Q96BP2 118 aaKnown RBP8.91□□□□□ -0.98
CLIP1-203ENST00000361654 C5orf30Q96GV9 206 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 ERG28Q9UKR5 140 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 KLF12Q9Y4X4 402 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 MTCL1Q9Y4B5 1905 aaKnown RBP8.91□□□□□ -0.98
CLIP1-203ENST00000361654 IGKV1-12A0A0C4DH73 117 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 COLCA2A8K830 154 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 NDUFB8O95169 186 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 IGKV1D-12P01611 117 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 TCRAP04437 139 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 VWC2Q2TAL6 325 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 PLA2G2CQ5R387 149 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 C1orf122Q6ZSJ8 110 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 PRSS33Q8NF86 280 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 TBX6O95947 436 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-203ENST00000361654 LY6G6FQ5SQ64 297 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 EXOC3-AS1Q8N2X6 119 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 MRAPQ8TCY5 172 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 DNAJC30Q96LL9 226 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 SSBP4Q9BWG4 385 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-203ENST00000361654 DIDO1Q9BTC0 2240 aaKnown RBP8.9□□□□□ -0.98
CLIP1-203ENST00000361654 IGKV1D-17A0A075B6S4 117 aa8.9□□□□□ -0.98
CLIP1-203ENST00000361654 LY6G5BQ8NDX9 201 aa8.9□□□□□ -0.98
CLIP1-203ENST00000361654 BRWD3Q6RI45 1802 aa8.9□□□□□ -0.98
CLIP1-203ENST00000361654 ATP6V0E1O15342 81 aa8.9□□□□□ -0.98
CLIP1-203ENST00000361654 LGALS1P09382 135 aaKnown RBP8.9□□□□□ -0.98
CLIP1-203ENST00000361654 TSSC4Q9Y5U2 329 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-203ENST00000361654 COL11A1P12107 1806 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-203ENST00000361654 B3GALT5-AS1P59052 145 aa8.9□□□□□ -0.98
CLIP1-203ENST00000361654 TRPT1Q86TN4 253 aaKnown RBP8.9□□□□□ -0.98
CLIP1-203ENST00000361654 GGTLC1Q9BX51 225 aa8.9□□□□□ -0.98
CLIP1-203ENST00000361654 SPCS1Q9Y6A9 102 aa8.9□□□□□ -0.98
CLIP1-203ENST00000361654 TCTEX1D4Q5JR98 221 aa8.9□□□□□ -0.99
CLIP1-203ENST00000361654 RALGAPA1Q6GYQ0 2036 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 MYO7BQ6PIF6 2116 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 TRBV6-6A0A0A6YYG2 114 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 TRAV8-2A0A0B4J237 113 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 ITGB1BP1O14713 200 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 SSBP2P81877 361 aaPredicted RBP8.89□□□□□ -0.99
CLIP1-203ENST00000361654 HGFACQ04756 655 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 PRIMA1Q86XR5 153 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 ZNF236Q9UL36 1845 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 DEFB113Q30KQ7 82 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 SPATA31B1PQ5VZV4 182 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 IL17RELQ6ZVW7 336 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 FAM19A2Q8N3H0 131 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 C14orf144Q96I85 54 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 Q8TCH9 128 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 CSTL1Q9H114 145 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 LIME1Q9H400 295 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 TET1Q8NFU7 2136 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 GAGE12JA6NER3 117 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 VWC2LB2RUY7 222 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 FGF16O43320 207 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 LYPD3O95274 346 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 GAGE1Q13065 139 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 GAGE4Q13068 117 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 GAGE5Q13069 117 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 PDE6HQ13956 83 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 GAGE13Q4V321 117 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 SIPA1L1O43166 1804 aa8.89□□□□□ -0.99
CLIP1-203ENST00000361654 C14orf178Q8N769 122 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-203ENST00000361654 ST6GALNAC6Q969X2 333 aa8.88□□□□□ -0.99
CLIP1-203ENST00000361654 SPAG8Q99932 426 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-203ENST00000361654 MRPL27Q9P0M9 148 aaKnown RBP8.88□□□□□ -0.99
CLIP1-203ENST00000361654 TEX48A0A1B0GUV7 120 aa8.88□□□□□ -0.99
CLIP1-203ENST00000361654 A8MWV9 139 aa8.88□□□□□ -0.99
CLIP1-203ENST00000361654 C22orf46C9J442 243 aa8.88□□□□□ -0.99
CLIP1-203ENST00000361654 SH2D1AO60880 128 aa8.88□□□□□ -0.99
CLIP1-203ENST00000361654 AZU1P20160 251 aa8.88□□□□□ -0.99
CLIP1-203ENST00000361654 C9orf66Q5T8R8 295 aa8.88□□□□□ -0.99
CLIP1-203ENST00000361654 LYZL1Q6UWQ5 148 aa8.88□□□□□ -0.99
CLIP1-203ENST00000361654 GNB1LQ9BYB4 327 aa8.88□□□□□ -0.99
CLIP1-203ENST00000361654 NHP2Q9NX24 153 aaKnown RBP8.88□□□□□ -0.99
CLIP1-203ENST00000361654 MPZP25189 248 aa8.88□□□□□ -0.99
CLIP1-203ENST00000361654 SNHG12Q9BXW3 62 aa8.88□□□□□ -0.99
CLIP1-203ENST00000361654 KLF2Q9Y5W3 355 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-203ENST00000361654 OCC1Q8TAD7 63 aa8.88□□□□□ -0.99
CLIP1-203ENST00000361654 GAGE12BA1L429 117 aa8.87□□□□□ -0.99
CLIP1-203ENST00000361654 NDUFA4O00483 81 aa8.87□□□□□ -0.99
CLIP1-203ENST00000361654 GAGE7O76087 117 aa8.87□□□□□ -0.99
CLIP1-203ENST00000361654 GAGE12FP0CL80 117 aa8.87□□□□□ -0.99
CLIP1-203ENST00000361654 GAGE12GP0CL81 117 aa8.87□□□□□ -0.99
CLIP1-203ENST00000361654 GAGE12IP0CL82 117 aa8.87□□□□□ -0.99
CLIP1-203ENST00000361654 CACNA1DQ01668 2161 aa8.87□□□□□ -0.99
CLIP1-203ENST00000361654 NMSQ5H8A3 153 aa8.87□□□□□ -0.99
CLIP1-203ENST00000361654 C1orf194Q5T5A4 169 aa8.87□□□□□ -0.99
CLIP1-203ENST00000361654 CADP27708 2225 aa8.87□□□□□ -0.99
CLIP1-203ENST00000361654 C1QL4Q86Z23 238 aa8.87□□□□□ -0.99
CLIP1-203ENST00000361654 MBD3L1Q8WWY6 194 aa8.87□□□□□ -0.99
CLIP1-203ENST00000361654 SCN2AQ99250 2005 aa8.87□□□□□ -0.99
CLIP1-203ENST00000361654 ARHGEF17Q96PE2 2063 aaPredicted RBP8.87□□□□□ -0.99
CLIP1-203ENST00000361654 LDLRAD4O15165 306 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms