RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ARHGAP32A7KAX9 2087 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 ZNF785A8K8V0 405 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 PNKDQ8N490 385 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 C17orf77Q96MU5 243 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 ST20Q9HBF5 79 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.28□□□□□ -1.567e-7■■■■■ 28.6
CSDE1-203ENST00000358528 IGHV3-49A0A0A0MS15 119 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 IGLC7A0M8Q6 106 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 PRELID3AQ96N28 172 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 GUCD1Q96NT3 240 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 DKK4Q9UBT3 224 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 UFC1Q9Y3C8 167 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 MGAQ8IWI9 3026 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 IGHV3-66A0A0C4DH42 116 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 FAM90A27PA6NNH2 459 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 C22orf46C9J442 243 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 FNDC10F2Z333 226 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 IFI27P40305 119 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-203ENST00000358528 C22orf34Q6ZV56 151 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 ATP5L2Q7Z4Y8 100 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 SPATA12Q7Z6I5 190 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 GTSF1Q8WW33 167 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 NGBQ9NPG2 151 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 PSG8Q9UQ74 426 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 NOTCH3Q9UM47 2321 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 LOC400499M0QZD8 3231 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 TMEM265A0A087WTH1 108 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 ARL3P36405 182 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 LGALS7P47929 136 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 PSG9Q00887 426 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 GUSBP1Q15486 140 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 PRSS57Q6UWY2 283 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 GTF2H5Q6ZYL4 71 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 PPP1R27Q86WC6 154 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 SLC25A39Q9BZJ4 359 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-203ENST00000358528 PEF1Q9UBV8 284 aaKnown RBP5.27□□□□□ -1.57
CSDE1-203ENST00000358528 OTOGLQ3ZCN5 2332 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 TLN1Q9Y490 2541 aaKnown RBP5.27□□□□□ -1.57
CSDE1-203ENST00000358528 TMEM213A2RRL7 107 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 A6NDN8 102 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 C2orf70A6NJV1 201 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 D6R8Y8 96 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 RASL11AQ6T310 242 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 AMN1Q8IY45 258 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 C8orf46Q8TAG6 207 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 Q8TAT8 98 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 MEGF9Q9H1U4 602 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 TMEM133Q9H2Q1 129 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 ANKHD1Q8IWZ3 2542 aaKnown RBP5.27□□□□□ -1.57
CSDE1-203ENST00000358528 IGKV2-40A0A087WW87 121 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-203ENST00000358528 IGKV2D-40P01614 121 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-203ENST00000358528 MEF2CQ06413 473 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-203ENST00000358528 POU2AF1Q16633 256 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 FAM231DQ6ZW35 169 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 Q86TA4 180 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 CHCHD1Q96BP2 118 aaKnown RBP5.27□□□□□ -1.57
CSDE1-203ENST00000358528 CST9LQ9H4G1 147 aa5.27□□□□□ -1.57
CSDE1-203ENST00000358528 TRAV30A0A087WSZ9 112 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 GAGE12BA1L429 117 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 NPIPB5A8MRT5 1133 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 VWC2LB2RUY7 222 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 LY6HO94772 140 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 TOMM40O96008 361 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 LHBP01229 141 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 EVI2AP22794 236 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 TMEM97Q5BJF2 176 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 SAPCD1Q5SSQ6 148 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 BVES-AS1Q5T3Y7 98 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 ZNF833PQ6ZTB9 187 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 OR5AN1Q8NGI8 311 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 ZNF414Q96IQ9 312 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 OTORQ9NRC9 128 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 PCSK5Q92824 1860 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 DMDP11532 3685 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 SPG11Q96JI7 2443 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 IGKV3-7A0A075B6H7 116 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 PPIAL4CA0A0B4J2A2 164 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 A1L4Q6 167 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 ITGB1BP1O14713 200 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 PPIAL4GP0DN37 164 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 CGB3P0DN86 165 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 CGB7P0DN87 165 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 HIST1H1AQ02539 215 aaPredicted RBP5.26□□□□□ -1.57
CSDE1-203ENST00000358528 ADIPOQQ15848 244 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 LYZL1Q6UWQ5 148 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 PET117Q6UWS5 81 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 SEM1Q6ZVN7 128 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 C8orf49Q96NF6 230 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 NDFIP1Q9BT67 221 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 KLK15Q9H2R5 256 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 IGHV1-8P0DP01 117 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 RPL11P62913 178 aaKnown RBP5.26□□□□□ -1.57
CSDE1-203ENST00000358528 RUSC1-AS1Q66K80 236 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 Q71RC1 249 aaPredicted RBP5.26□□□□□ -1.57
CSDE1-203ENST00000358528 CEP295Q9C0D2 2601 aa5.26□□□□□ -1.57
CSDE1-203ENST00000358528 MBD3L4A6NDZ8 208 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-203ENST00000358528 MBD3L3A6NE82 208 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-203ENST00000358528 MBD3L5A6NJ08 208 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-203ENST00000358528 TMEM178BH3BS89 294 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 MBD3L2Q8NHZ7 208 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms