RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 TOMM40O96008 361 aa7.81□□□□□ -1.16
GABPA-201ENST00000354828 TAS2R60P59551 318 aa7.81□□□□□ -1.16
GABPA-201ENST00000354828 DIAPH2-AS1Q14236 149 aa7.81□□□□□ -1.16
GABPA-201ENST00000354828 SPRNQ5BIV9 151 aa7.81□□□□□ -1.16
GABPA-201ENST00000354828 EXOC3-AS1Q8N2X6 119 aa7.81□□□□□ -1.16
GABPA-201ENST00000354828 RNASE2P10153 161 aaKnown RBP7.8□□□□□ -1.16
GABPA-201ENST00000354828 SRSF4Q08170 494 aaKnown RBP7.8□□□□□ -1.16
GABPA-201ENST00000354828 CFAP161Q6P656 301 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 C2orf88Q9BSF0 95 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 NMBP08949 121 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 NMUP48645 174 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 MLANAQ16655 118 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 TMEM95Q3KNT9 176 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 MRPL18Q9H0U6 180 aaKnown RBP7.8□□□□□ -1.16
GABPA-201ENST00000354828 DPH3P1Q9H4G8 78 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 NRN1Q9NPD7 142 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 ZFP30Q9Y2G7 519 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 IGHV3-73A0A0B4J1V6 119 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 CENPVL3A0A0U1RRI6 287 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 C10orf142B7Z368 130 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 CCL24O00175 119 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 PLA2G2AP14555 144 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 SNRPEP62304 92 aaKnown RBP7.8□□□□□ -1.16
GABPA-201ENST00000354828 CIRBPQ14011 172 aaKnown RBP7.8□□□□□ -1.16
GABPA-201ENST00000354828 WFDC11Q8NEX6 87 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 GGTLC1Q9BX51 225 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 PLCE1Q9P212 2302 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 A0A1W2PRE2 83 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 OR10J3Q5JRS4 329 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 TMEM136Q6ZRR5 245 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 PRELID3AQ96N28 172 aa7.8□□□□□ -1.16
GABPA-201ENST00000354828 ANKRD11Q6UB99 2663 aaPredicted RBP7.8□□□□□ -1.16
GABPA-201ENST00000354828 IGKV1-6A0A0C4DH72 117 aa7.79□□□□□ -1.16
GABPA-201ENST00000354828 LGALS3P17931 250 aaKnown RBP7.79□□□□□ -1.16
GABPA-201ENST00000354828 SRIP30626 198 aa7.79□□□□□ -1.16
GABPA-201ENST00000354828 FOXA3P55318 350 aaPredicted RBP7.79□□□□□ -1.16
GABPA-201ENST00000354828 ALKBH7Q9BT30 221 aaPredicted RBP7.79□□□□□ -1.16
GABPA-201ENST00000354828 H3BVH4 76 aa7.79□□□□□ -1.16
GABPA-201ENST00000354828 SLC17A3O00476 420 aa7.79□□□□□ -1.16
GABPA-201ENST00000354828 ZNF138P52744 262 aa7.79□□□□□ -1.16
GABPA-201ENST00000354828 CA1P00915 261 aaPredicted RBP7.79□□□□□ -1.16
GABPA-201ENST00000354828 DAD1P61803 113 aa7.79□□□□□ -1.16
GABPA-201ENST00000354828 Q6AWC8 147 aa7.79□□□□□ -1.16
GABPA-201ENST00000354828 LINC00477Q96M19 166 aa7.79□□□□□ -1.16
GABPA-201ENST00000354828 C5orf52A6NGY3 159 aa7.79□□□□□ -1.16
GABPA-201ENST00000354828 F5H768 121 aa7.79□□□□□ -1.16
GABPA-201ENST00000354828 NMSQ5H8A3 153 aa7.79□□□□□ -1.16
GABPA-201ENST00000354828 ZNF506Q5JVG8 444 aa7.79□□□□□ -1.16
GABPA-201ENST00000354828 TMEM50AO95807 157 aa7.78□□□□□ -1.16
GABPA-201ENST00000354828 SUPT4H1P63272 117 aaKnown RBP7.78□□□□□ -1.16
GABPA-201ENST00000354828 C8orf86Q6ZUL3 223 aa7.78□□□□□ -1.16
GABPA-201ENST00000354828 RNF126Q9BV68 326 aa7.78□□□□□ -1.16
GABPA-201ENST00000354828 LEPROTL1O95214 131 aa7.78□□□□□ -1.16
GABPA-201ENST00000354828 DEFB136Q30KP8 78 aa7.78□□□□□ -1.16
GABPA-201ENST00000354828 LRRC75A-AS1Q8N1F1 130 aa7.78□□□□□ -1.16
GABPA-201ENST00000354828 IGFBPL1Q8WX77 278 aa7.78□□□□□ -1.16
GABPA-201ENST00000354828 ST20Q9HBF5 79 aa7.78□□□□□ -1.16
GABPA-201ENST00000354828 ABCA2Q9BZC7 2435 aa7.78□□□□□ -1.16
GABPA-201ENST00000354828 RPLP1P05386 114 aaKnown RBP7.78□□□□□ -1.16
GABPA-201ENST00000354828 VAMP3Q15836 100 aa7.78□□□□□ -1.16
GABPA-201ENST00000354828 TMEM170BQ5T4T1 132 aa7.78□□□□□ -1.16
GABPA-201ENST00000354828 OR10AG1Q8NH19 301 aa7.78□□□□□ -1.16
GABPA-201ENST00000354828 TMEM70Q9BUB7 260 aa7.78□□□□□ -1.16
GABPA-201ENST00000354828 COTL1Q14019 142 aa7.77□□□□□ -1.16
GABPA-201ENST00000354828 SPATA31B1PQ5VZV4 182 aa7.77□□□□□ -1.16
GABPA-201ENST00000354828 KIAA1549LQ6ZVL6 1849 aa7.77□□□□□ -1.16
GABPA-201ENST00000354828 IFITM10A6NMD0 228 aa7.77□□□□□ -1.17
GABPA-201ENST00000354828 C15orf65H3BRN8 121 aa7.77□□□□□ -1.17
GABPA-201ENST00000354828 MGST2Q99735 147 aa7.77□□□□□ -1.17
GABPA-201ENST00000354828 TPSG1Q9NRR2 321 aa7.77□□□□□ -1.17
GABPA-201ENST00000354828 INAFM1C9JVW0 142 aa7.77□□□□□ -1.17
GABPA-201ENST00000354828 ZNF134P52741 427 aa7.77□□□□□ -1.17
GABPA-201ENST00000354828 PSG3Q16557 428 aa7.77□□□□□ -1.17
GABPA-201ENST00000354828 C1QL4Q86Z23 238 aa7.77□□□□□ -1.17
GABPA-201ENST00000354828 C11orf53Q8IXP5 236 aa7.77□□□□□ -1.17
GABPA-201ENST00000354828 BTCP35070 178 aa7.77□□□□□ -1.17
GABPA-201ENST00000354828 CACNG7P62955 275 aa7.77□□□□□ -1.17
GABPA-201ENST00000354828 RPL36AP83881 106 aaKnown RBP7.77□□□□□ -1.17
GABPA-201ENST00000354828 OR13C6PQ8NH95 151 aa7.77□□□□□ -1.17
GABPA-201ENST00000354828 Q8TAT8 98 aa7.77□□□□□ -1.17
GABPA-201ENST00000354828 RPL36ALQ969Q0 106 aaKnown RBP7.77□□□□□ -1.17
GABPA-201ENST00000354828 RNF222A6NCQ9 220 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 H0YIZ8 118 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 NDUFA4O00483 81 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 BLCAPP62952 87 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 LOXL1Q08397 574 aaPredicted RBP7.76□□□□□ -1.17
GABPA-201ENST00000354828 C9orf66Q5T8R8 295 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 ST6GALNAC6Q969X2 333 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 SCGB3A1Q96QR1 104 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 MRPL27Q9P0M9 148 aaKnown RBP7.76□□□□□ -1.17
GABPA-201ENST00000354828 RFNGQ9Y644 331 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 LYRM7Q5U5X0 104 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 C18orf15Q96N68 181 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 IGKV3D-20A0A0C4DH25 116 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 C7orf71A4D174 169 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 LINC00862A6NCI5 91 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 CCL20P78556 96 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 OR11H6Q8NGC7 330 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 HIGD1CA8MV81 97 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 H3BRM9 83 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms