RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 SHANK2-AS3Q9BTD1 123 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 SLC39A9Q9NUM3 307 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 C17orf112F2Z3M2 114 aa15.5■□□□□ 0.07
SMARCB1-202ENST00000344921 K7EQG2 157 aa15.5■□□□□ 0.07
SMARCB1-202ENST00000344921 OR1L4Q8NGR5 311 aa15.5■□□□□ 0.07
SMARCB1-202ENST00000344921 DCANP1Q8TF63 244 aa15.5■□□□□ 0.07
SMARCB1-202ENST00000344921 ASCL2Q99929 193 aa15.5■□□□□ 0.07
SMARCB1-202ENST00000344921 SLC25A32Q9H2D1 315 aa15.5■□□□□ 0.07
SMARCB1-202ENST00000344921 DNAJC4Q9NNZ3 241 aa15.5■□□□□ 0.07
SMARCB1-202ENST00000344921 C1QBP02746 253 aa15.49■□□□□ 0.07
SMARCB1-202ENST00000344921 APRG1Q8IVJ8 170 aa15.49■□□□□ 0.07
SMARCB1-202ENST00000344921 FAM24BQ8N5W8 94 aa15.49■□□□□ 0.07
SMARCB1-202ENST00000344921 TMEM37Q8WXS4 190 aa15.49■□□□□ 0.07
SMARCB1-202ENST00000344921 GPR82Q96P67 336 aa15.49■□□□□ 0.07
SMARCB1-202ENST00000344921 PFDN5Q99471 154 aa15.49■□□□□ 0.07
SMARCB1-202ENST00000344921 FAM110AQ9BQ89 295 aa15.49■□□□□ 0.07
SMARCB1-202ENST00000344921 MAP6D1Q9H9H5 199 aa15.49■□□□□ 0.07
SMARCB1-202ENST00000344921 RNF24Q9Y225 148 aa15.49■□□□□ 0.07
SMARCB1-202ENST00000344921 SMLR1H3BR10 107 aa15.48■□□□□ 0.07
SMARCB1-202ENST00000344921 KCNIP2Q9NS61 270 aa15.48■□□□□ 0.07
SMARCB1-202ENST00000344921 ZNF688P0C7X2 276 aa15.48■□□□□ 0.07
SMARCB1-202ENST00000344921 DEFB131AP59861 70 aa15.48■□□□□ 0.07
SMARCB1-202ENST00000344921 ZNF767PQ75MW2 155 aa15.48■□□□□ 0.07
SMARCB1-202ENST00000344921 RSG1Q9BU20 258 aa15.48■□□□□ 0.07
SMARCB1-202ENST00000344921 WFDC1Q9HC57 220 aa15.48■□□□□ 0.07
SMARCB1-202ENST00000344921 RPL7P18124 248 aaKnown RBP15.47■□□□□ 0.07
SMARCB1-202ENST00000344921 SNRPD3P62318 126 aaKnown RBP15.47■□□□□ 0.07
SMARCB1-202ENST00000344921 TNFSF18Q9UNG2 199 aa15.47■□□□□ 0.07
SMARCB1-202ENST00000344921 ATF4P18848 351 aaPredicted RBP15.46■□□□□ 0.07
SMARCB1-202ENST00000344921 ZNF266Q14584 549 aa15.46■□□□□ 0.07
SMARCB1-202ENST00000344921 ZNF124Q15973 351 aa15.46■□□□□ 0.07
SMARCB1-202ENST00000344921 SBSPONQ8IVN8 264 aa15.46■□□□□ 0.07
SMARCB1-202ENST00000344921 CITED4Q96RK1 184 aa15.46■□□□□ 0.07
SMARCB1-202ENST00000344921 RBMY1BA6NDE4 496 aaKnown RBP15.46■□□□□ 0.06
SMARCB1-202ENST00000344921 RBMY1EA6NEQ0 496 aaKnown RBP15.46■□□□□ 0.06
SMARCB1-202ENST00000344921 G3V3Q6 166 aa15.46■□□□□ 0.06
SMARCB1-202ENST00000344921 ARPC5O15511 151 aa15.46■□□□□ 0.06
SMARCB1-202ENST00000344921 RBMY1DP0C7P1 496 aaKnown RBP15.46■□□□□ 0.06
SMARCB1-202ENST00000344921 RNF222A6NCQ9 220 aa15.45■□□□□ 0.06
SMARCB1-202ENST00000344921 ID1P41134 155 aa15.45■□□□□ 0.06
SMARCB1-202ENST00000344921 PSMG4Q5JS54 123 aa15.45■□□□□ 0.06
SMARCB1-202ENST00000344921 GATAD1Q8WUU5 269 aa15.45■□□□□ 0.06
SMARCB1-202ENST00000344921 LOC102724200A0A096LPH7 203 aaPredicted RBP15.44■□□□□ 0.06
SMARCB1-202ENST00000344921 MEOX2P50222 304 aa15.44■□□□□ 0.06
SMARCB1-202ENST00000344921 PARD6GQ9BYG4 376 aaPredicted RBP15.44■□□□□ 0.06
SMARCB1-202ENST00000344921 GCSAMLQ5JQS6 135 aa15.43■□□□□ 0.06
SMARCB1-202ENST00000344921 MORN5Q5VZ52 161 aa15.43■□□□□ 0.06
SMARCB1-202ENST00000344921 BPIFA4PQ86YQ2 179 aa15.43■□□□□ 0.06
SMARCB1-202ENST00000344921 C16orf92Q96LL3 132 aa15.43■□□□□ 0.06
SMARCB1-202ENST00000344921 HYLS1Q96M11 299 aa15.43■□□□□ 0.06
SMARCB1-202ENST00000344921 LINC00052Q96N35 136 aa15.43■□□□□ 0.06
SMARCB1-202ENST00000344921 HAGHQ16775 308 aa15.43■□□□□ 0.06
SMARCB1-202ENST00000344921 FFAR4Q5NUL3 377 aa15.43■□□□□ 0.06
SMARCB1-202ENST00000344921 FAM78BQ5VT40 261 aa15.43■□□□□ 0.06
SMARCB1-202ENST00000344921 MFFQ9GZY8 342 aa15.43■□□□□ 0.06
SMARCB1-202ENST00000344921 NHLRC4P0CG21 123 aaPredicted RBP15.42■□□□□ 0.06
SMARCB1-202ENST00000344921 RPL35AP18077 110 aaKnown RBP15.42■□□□□ 0.06
SMARCB1-202ENST00000344921 SAMD13Q5VXD3 122 aa15.42■□□□□ 0.06
SMARCB1-202ENST00000344921 LRRC20Q8TCA0 184 aa15.42■□□□□ 0.06
SMARCB1-202ENST00000344921 SEPSECSQ9HD40 501 aaKnown RBP15.42■□□□□ 0.06
SMARCB1-202ENST00000344921 TRAV5A0A0B4J249 113 aa15.41■□□□□ 0.06
SMARCB1-202ENST00000344921 PSMB3P49720 205 aa15.41■□□□□ 0.06
SMARCB1-202ENST00000344921 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.41■□□□□ 0.06
SMARCB1-202ENST00000344921 LINC00322Q6ZN03 302 aaPredicted RBP15.41■□□□□ 0.06
SMARCB1-202ENST00000344921 STHQ8IWL8 128 aa15.41■□□□□ 0.06
SMARCB1-202ENST00000344921 HSD17B11Q8NBQ5 300 aa15.41■□□□□ 0.06
SMARCB1-202ENST00000344921 ISLRO14498 428 aa15.4■□□□□ 0.06
SMARCB1-202ENST00000344921 SNRPCP09234 159 aaKnown RBP15.4■□□□□ 0.06
SMARCB1-202ENST00000344921 ZMAT4Q9H898 229 aa15.4■□□□□ 0.06
SMARCB1-202ENST00000344921 BOLA1Q9Y3E2 137 aa15.4■□□□□ 0.06
SMARCB1-202ENST00000344921 TGP01266 2768 aa15.4■□□□□ 0.06
SMARCB1-202ENST00000344921 BORCS7-ASMTA0A0B4J1R7 106 aa15.4■□□□□ 0.06
SMARCB1-202ENST00000344921 RFNGQ9Y644 331 aa15.4■□□□□ 0.06
SMARCB1-202ENST00000344921 KNCNA6PVL3 124 aa15.39■□□□□ 0.05
SMARCB1-202ENST00000344921 SOCS3O14543 225 aa15.39■□□□□ 0.05
SMARCB1-202ENST00000344921 APOC4P55056 127 aa15.39■□□□□ 0.05
SMARCB1-202ENST00000344921 ACTL10Q5JWF8 245 aa15.39■□□□□ 0.05
SMARCB1-202ENST00000344921 RPL7L1Q6DKI1 246 aaKnown RBP15.38■□□□□ 0.05
SMARCB1-202ENST00000344921 OR11H4Q8NGC9 324 aa15.38■□□□□ 0.05
SMARCB1-202ENST00000344921 C17orf77Q96MU5 243 aa15.38■□□□□ 0.05
SMARCB1-202ENST00000344921 TIMM9Q9Y5J7 89 aa15.38■□□□□ 0.05
SMARCB1-202ENST00000344921 A0A087X0K7 114 aa15.37■□□□□ 0.05
SMARCB1-202ENST00000344921 MRPS12O15235 138 aaKnown RBP15.37■□□□□ 0.05
SMARCB1-202ENST00000344921 IGFL4Q6B9Z1 124 aa15.37■□□□□ 0.05
SMARCB1-202ENST00000344921 HMSDA8MTL9 139 aa15.37■□□□□ 0.05
SMARCB1-202ENST00000344921 TAAR5O14804 337 aa15.37■□□□□ 0.05
SMARCB1-202ENST00000344921 ATP6V0CP27449 155 aa15.37■□□□□ 0.05
SMARCB1-202ENST00000344921 ACOT6Q3I5F7 207 aaPredicted RBP15.37■□□□□ 0.05
SMARCB1-202ENST00000344921 SPATA31B1PQ5VZV4 182 aa15.37■□□□□ 0.05
SMARCB1-202ENST00000344921 MIR17HGQ75NE6 70 aa15.37■□□□□ 0.05
SMARCB1-202ENST00000344921 MRPL32Q9BYC8 188 aaKnown RBP15.37■□□□□ 0.05
SMARCB1-202ENST00000344921 RPRMQ9NS64 109 aa15.37■□□□□ 0.05
SMARCB1-202ENST00000344921 H3BTX0 84 aa15.36■□□□□ 0.05
SMARCB1-202ENST00000344921 LCN15Q6UWW0 184 aa15.36■□□□□ 0.05
SMARCB1-202ENST00000344921 SPATA25Q9BR10 227 aa15.36■□□□□ 0.05
SMARCB1-202ENST00000344921 TM2D3Q9BRN9 247 aa15.36■□□□□ 0.05
SMARCB1-202ENST00000344921 HRH4Q9H3N8 390 aa15.36■□□□□ 0.05
SMARCB1-202ENST00000344921 FUT9Q9Y231 359 aa15.36■□□□□ 0.05
SMARCB1-202ENST00000344921 RHOBP62745 196 aa15.35■□□□□ 0.05
SMARCB1-202ENST00000344921 ZNF345Q14585 488 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms