RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 APOC4P55056 127 aa11.25□□□□□ -0.61
UBE3B-201ENST00000340074 Q6ZRG5 221 aa11.25□□□□□ -0.61
UBE3B-201ENST00000340074 LINC00305Q7Z4B0 112 aa11.25□□□□□ -0.61
UBE3B-201ENST00000340074 S100A7AQ86SG5 101 aa11.25□□□□□ -0.61
UBE3B-201ENST00000340074 CHAC2Q8WUX2 184 aa11.25□□□□□ -0.61
UBE3B-201ENST00000340074 C17orf77Q96MU5 243 aa11.25□□□□□ -0.61
UBE3B-201ENST00000340074 GPR82Q96P67 336 aa11.25□□□□□ -0.61
UBE3B-201ENST00000340074 RSG1Q9BU20 258 aa11.25□□□□□ -0.61
UBE3B-201ENST00000340074 NPCDR1Q9BY65 106 aa11.25□□□□□ -0.61
UBE3B-201ENST00000340074 SEPSECSQ9HD40 501 aaKnown RBP11.25□□□□□ -0.61
UBE3B-201ENST00000340074 PXMP4Q9Y6I8 212 aa11.25□□□□□ -0.61
UBE3B-201ENST00000340074 ELOA3CA0A087WX78 387 aaPredicted RBP11.24□□□□□ -0.61
UBE3B-201ENST00000340074 KNCNA6PVL3 124 aa11.24□□□□□ -0.61
UBE3B-201ENST00000340074 B2MP61769 119 aa11.24□□□□□ -0.61
UBE3B-201ENST00000340074 Q5BKY6 102 aa11.24□□□□□ -0.61
UBE3B-201ENST00000340074 C10orf113Q5VZT2 155 aa11.24□□□□□ -0.61
UBE3B-201ENST00000340074 STHQ8IWL8 128 aa11.24□□□□□ -0.61
UBE3B-201ENST00000340074 ASB13Q8WXK3 278 aa11.24□□□□□ -0.61
UBE3B-201ENST00000340074 ATP5SQ99766 215 aa11.24□□□□□ -0.61
UBE3B-201ENST00000340074 SMIM3Q9BZL3 60 aa11.24□□□□□ -0.61
UBE3B-201ENST00000340074 SLC39A9Q9NUM3 307 aa11.24□□□□□ -0.61
UBE3B-201ENST00000340074 KIR2DL5BA0A0G2JN68 375 aa11.23□□□□□ -0.61
UBE3B-201ENST00000340074 KIR2DL5BA0A0G2JPC4 375 aa11.23□□□□□ -0.61
UBE3B-201ENST00000340074 RPL7P18124 248 aaKnown RBP11.23□□□□□ -0.61
UBE3B-201ENST00000340074 ID1P41134 155 aa11.23□□□□□ -0.61
UBE3B-201ENST00000340074 PSMB3P49720 205 aa11.23□□□□□ -0.61
UBE3B-201ENST00000340074 FGL1Q08830 312 aa11.23□□□□□ -0.61
UBE3B-201ENST00000340074 ACTL10Q5JWF8 245 aa11.23□□□□□ -0.61
UBE3B-201ENST00000340074 MORN5Q5VZ52 161 aa11.23□□□□□ -0.61
UBE3B-201ENST00000340074 KIR2DL5AQ8N109 375 aa11.23□□□□□ -0.61
UBE3B-201ENST00000340074 KIR2DL5BQ8NHK3 375 aa11.23□□□□□ -0.61
UBE3B-201ENST00000340074 LINC00052Q96N35 136 aa11.23□□□□□ -0.61
UBE3B-201ENST00000340074 WDR61Q9GZS3 305 aaKnown RBP11.23□□□□□ -0.61
UBE3B-201ENST00000340074 DNAJC4Q9NNZ3 241 aa11.23□□□□□ -0.61
UBE3B-201ENST00000340074 UBE2CO00762 179 aa11.22□□□□□ -0.61
UBE3B-201ENST00000340074 ATF4P18848 351 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-201ENST00000340074 MEOX2P50222 304 aa11.22□□□□□ -0.61
UBE3B-201ENST00000340074 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.22□□□□□ -0.61
UBE3B-201ENST00000340074 OR1L4Q8NGR5 311 aa11.22□□□□□ -0.61
UBE3B-201ENST00000340074 WWC2-AS2Q96NR7 200 aa11.22□□□□□ -0.61
UBE3B-201ENST00000340074 PFDN5Q99471 154 aa11.22□□□□□ -0.61
UBE3B-201ENST00000340074 CSTL1Q9H114 145 aa11.22□□□□□ -0.61
UBE3B-201ENST00000340074 RNF24Q9Y225 148 aa11.22□□□□□ -0.61
UBE3B-201ENST00000340074 ISLRO14498 428 aa11.21□□□□□ -0.61
UBE3B-201ENST00000340074 DEFB135Q30KP9 77 aa11.21□□□□□ -0.61
UBE3B-201ENST00000340074 Q6ZWC4 215 aa11.21□□□□□ -0.61
UBE3B-201ENST00000340074 TRPT1Q86TN4 253 aaKnown RBP11.21□□□□□ -0.61
UBE3B-201ENST00000340074 C16orf92Q96LL3 132 aa11.21□□□□□ -0.61
UBE3B-201ENST00000340074 MRPS12O15235 138 aaKnown RBP11.2□□□□□ -0.62
UBE3B-201ENST00000340074 DEFB1P60022 68 aa11.2□□□□□ -0.62
UBE3B-201ENST00000340074 GCSAMLQ5JQS6 135 aa11.2□□□□□ -0.62
UBE3B-201ENST00000340074 SAMD13Q5VXD3 122 aa11.2□□□□□ -0.62
UBE3B-201ENST00000340074 ZNF709Q8N972 641 aa11.2□□□□□ -0.62
UBE3B-201ENST00000340074 OR2T35Q8NGX2 323 aa11.2□□□□□ -0.62
UBE3B-201ENST00000340074 C20orf173Q96LM9 149 aa11.2□□□□□ -0.62
UBE3B-201ENST00000340074 OVOL2Q9BRP0 275 aa11.2□□□□□ -0.62
UBE3B-201ENST00000340074 WFDC1Q9HC57 220 aa11.2□□□□□ -0.62
UBE3B-201ENST00000340074 A0A087X0K7 114 aa11.19□□□□□ -0.62
UBE3B-201ENST00000340074 TRAV5A0A0B4J249 113 aa11.19□□□□□ -0.62
UBE3B-201ENST00000340074 IFNA5P01569 189 aa11.19□□□□□ -0.62
UBE3B-201ENST00000340074 GDF5OSQ5U4N7 250 aa11.19□□□□□ -0.62
UBE3B-201ENST00000340074 IGFL4Q6B9Z1 124 aa11.19□□□□□ -0.62
UBE3B-201ENST00000340074 BPIFA4PQ86YQ2 179 aa11.19□□□□□ -0.62
UBE3B-201ENST00000340074 SCGB1C1Q8TD33 95 aa11.19□□□□□ -0.62
UBE3B-201ENST00000340074 AQP10Q96PS8 301 aa11.19□□□□□ -0.62
UBE3B-201ENST00000340074 TRAV8-2A0A0B4J237 113 aa11.18□□□□□ -0.62
UBE3B-201ENST00000340074 C17orf112F2Z3M2 114 aa11.18□□□□□ -0.62
UBE3B-201ENST00000340074 SPRY2O43597 315 aa11.18□□□□□ -0.62
UBE3B-201ENST00000340074 CA1P00915 261 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-201ENST00000340074 SNRPCP09234 159 aaKnown RBP11.18□□□□□ -0.62
UBE3B-201ENST00000340074 GATAD1Q8WUU5 269 aa11.18□□□□□ -0.62
UBE3B-201ENST00000340074 KCNIP2Q9NS61 270 aa11.18□□□□□ -0.62
UBE3B-201ENST00000340074 TP53TG1Q9Y2A0 90 aa11.18□□□□□ -0.62
UBE3B-201ENST00000340074 FXYD6-FXYD2A0A087WZ82 144 aa11.18□□□□□ -0.62
UBE3B-201ENST00000340074 G3V3Q6 166 aa11.18□□□□□ -0.62
UBE3B-201ENST00000340074 H3BMM0 161 aa11.18□□□□□ -0.62
UBE3B-201ENST00000340074 HLA-DRB4P13762 266 aa11.18□□□□□ -0.62
UBE3B-201ENST00000340074 RNF182Q8N6D2 247 aa11.18□□□□□ -0.62
UBE3B-201ENST00000340074 RNF183Q96D59 192 aa11.18□□□□□ -0.62
UBE3B-201ENST00000340074 SAV1Q9H4B6 383 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-201ENST00000340074 RPRMQ9NS64 109 aa11.18□□□□□ -0.62
UBE3B-201ENST00000340074 HLA-DRB4X5D2U9 266 aa11.18□□□□□ -0.62
UBE3B-201ENST00000340074 F6UB75 175 aa11.17□□□□□ -0.62
UBE3B-201ENST00000340074 SPP1P10451 314 aa11.17□□□□□ -0.62
UBE3B-201ENST00000340074 FAM78BQ5VT40 261 aa11.17□□□□□ -0.62
UBE3B-201ENST00000340074 MORN3Q6PF18 240 aaPredicted RBP11.17□□□□□ -0.62
UBE3B-201ENST00000340074 FOXI2Q6ZQN5 318 aa11.17□□□□□ -0.62
UBE3B-201ENST00000340074 INO80EQ8NBZ0 244 aaPredicted RBP11.17□□□□□ -0.62
UBE3B-201ENST00000340074 PARD6GQ9BYG4 376 aaPredicted RBP11.17□□□□□ -0.62
UBE3B-201ENST00000340074 EDA2RQ9HAV5 297 aa11.17□□□□□ -0.62
UBE3B-201ENST00000340074 RFNGQ9Y644 331 aa11.17□□□□□ -0.62
UBE3B-201ENST00000340074 RNF222A6NCQ9 220 aa11.16□□□□□ -0.62
UBE3B-201ENST00000340074 H3BTX0 84 aa11.16□□□□□ -0.62
UBE3B-201ENST00000340074 GIG44P09565 113 aaPredicted RBP11.16□□□□□ -0.62
UBE3B-201ENST00000340074 IGLC2P0DOY2 106 aa11.16□□□□□ -0.62
UBE3B-201ENST00000340074 C4BPBP20851 252 aa11.16□□□□□ -0.62
UBE3B-201ENST00000340074 HLA-DMBP28068 263 aa11.16□□□□□ -0.62
UBE3B-201ENST00000340074 FFAR4Q5NUL3 377 aa11.16□□□□□ -0.62
UBE3B-201ENST00000340074 SPATA31B1PQ5VZV4 182 aa11.16□□□□□ -0.62
UBE3B-201ENST00000340074 LRRC20Q8TCA0 184 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms