RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 UHRF2Q96PU4 802 aa9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 RNF126Q9BV68 326 aa9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 TMEM147Q9BVK8 224 aa9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 KRTAP17-1Q9BYP8 105 aa9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 RPRMQ9NS64 109 aa9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 GSKIPQ9P0R6 139 aa9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 DKK2Q9UBU2 259 aa9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 PIGBOS1A0A0B4J2F0 54 aa9.52□□□□□ -0.89
NUDCD3-201ENST00000338427 ZNF705GA8MUZ8 300 aaPredicted RBP9.52□□□□□ -0.89
NUDCD3-201ENST00000338427 PLA2G10O15496 165 aa9.52□□□□□ -0.89
NUDCD3-201ENST00000338427 SPART-AS1P0CW21 52 aa9.52□□□□□ -0.89
NUDCD3-201ENST00000338427 HTN3P15516 51 aa9.52□□□□□ -0.89
NUDCD3-201ENST00000338427 C4orf46Q504U0 113 aa9.52□□□□□ -0.89
NUDCD3-201ENST00000338427 DEDD2Q8WXF8 326 aa9.52□□□□□ -0.89
NUDCD3-201ENST00000338427 SMIM8Q96KF7 97 aa9.52□□□□□ -0.89
NUDCD3-201ENST00000338427 CLUHP3Q96NS8 147 aa9.52□□□□□ -0.89
NUDCD3-201ENST00000338427 C7orf50Q9BRJ6 194 aaKnown RBP9.52□□□□□ -0.89
NUDCD3-201ENST00000338427 SLC25A39Q9BZJ4 359 aaPredicted RBP9.52□□□□□ -0.89
NUDCD3-201ENST00000338427 NAP1L6A6NFF2 107 aa9.51□□□□□ -0.89
NUDCD3-201ENST00000338427 SMIM9A6NGZ8 99 aa9.51□□□□□ -0.89
NUDCD3-201ENST00000338427 H3BRN7 92 aa9.51□□□□□ -0.89
NUDCD3-201ENST00000338427 M0R2Z0 102 aa9.51□□□□□ -0.89
NUDCD3-201ENST00000338427 CCSO14618 274 aa9.51□□□□□ -0.89
NUDCD3-201ENST00000338427 CFDP00746 253 aaPredicted RBP9.51□□□□□ -0.89
NUDCD3-201ENST00000338427 IFNA21P01568 189 aa9.51□□□□□ -0.89
NUDCD3-201ENST00000338427 OR5G3P0C626 314 aa9.51□□□□□ -0.89
NUDCD3-201ENST00000338427 IL7P13232 177 aa9.51□□□□□ -0.89
NUDCD3-201ENST00000338427 IAH1Q2TAA2 248 aaPredicted RBP9.51□□□□□ -0.89
NUDCD3-201ENST00000338427 TMEM14EPQ6UXP3 125 aa9.51□□□□□ -0.89
NUDCD3-201ENST00000338427 RFNGQ9Y644 331 aa9.51□□□□□ -0.89
NUDCD3-201ENST00000338427 DYNC1H1Q14204 4646 aaKnown RBP9.51□□□□□ -0.89
NUDCD3-201ENST00000338427 TRAV12-2A0A075B6T6 113 aa9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 LOC102723971A0A1B0GUV8 181 aa9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 CRXO43186 299 aaPredicted RBP9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 HYPMO75409 117 aa9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 AZU1P20160 251 aa9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 CNN1P51911 297 aaKnown RBP9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 SLC38A11Q08AI6 406 aa9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 FCN2Q15485 313 aa9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 SPINK13Q1W4C9 94 aa9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 ZBTB8BQ8NAP8 495 aaPredicted RBP9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 OR11H7Q8NGC8 314 aa9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 NIPSNAP3BQ9BS92 247 aa9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 SHANK2-AS3Q9BTD1 123 aa9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 ARL6Q9H0F7 186 aa9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 SLC45A2Q9UMX9 530 aa9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 HIGD1AQ9Y241 93 aa9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 GOLT1BQ9Y3E0 138 aa9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 YTHDF2Q9Y5A9 579 aaKnown RBP9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 KIAA1109Q2LD37 5005 aa9.5□□□□□ -0.89
NUDCD3-201ENST00000338427 A8MTW9 85 aa9.49□□□□□ -0.89
NUDCD3-201ENST00000338427 H3BTX0 84 aa9.49□□□□□ -0.89
NUDCD3-201ENST00000338427 ZNF701M0R085 212 aaPredicted RBP9.49□□□□□ -0.89
NUDCD3-201ENST00000338427 HBE1P02100 147 aa9.49□□□□□ -0.89
NUDCD3-201ENST00000338427 MBPP02686 304 aaPredicted RBP9.49□□□□□ -0.89
NUDCD3-201ENST00000338427 LINC00869P0C866 280 aa9.49□□□□□ -0.89
NUDCD3-201ENST00000338427 MEOX2P50222 304 aa9.49□□□□□ -0.89
NUDCD3-201ENST00000338427 SPATA31B1PQ5VZV4 182 aa9.49□□□□□ -0.89
NUDCD3-201ENST00000338427 POM121L12Q8N7R1 296 aa9.49□□□□□ -0.89
NUDCD3-201ENST00000338427 NDUFAF3Q9BU61 184 aa9.49□□□□□ -0.89
NUDCD3-201ENST00000338427 NPVFQ9HCQ7 196 aa9.49□□□□□ -0.89
NUDCD3-201ENST00000338427 RCL1Q9Y2P8 373 aaKnown RBP9.49□□□□□ -0.89
NUDCD3-201ENST00000338427 C7orf66A4D0T2 115 aa9.48□□□□□ -0.89
NUDCD3-201ENST00000338427 AMBPP02760 352 aa9.48□□□□□ -0.89
NUDCD3-201ENST00000338427 PLP1P60201 277 aa9.48□□□□□ -0.89
NUDCD3-201ENST00000338427 RAP2BP61225 183 aa9.48□□□□□ -0.89
NUDCD3-201ENST00000338427 DLK1P80370 383 aa9.48□□□□□ -0.89
NUDCD3-201ENST00000338427 RRN3P1Q2M238 152 aa9.48□□□□□ -0.89
NUDCD3-201ENST00000338427 BAP18Q8IXM2 172 aa9.48□□□□□ -0.89
NUDCD3-201ENST00000338427 ZNF738Q8NE65 137 aa9.48□□□□□ -0.89
NUDCD3-201ENST00000338427 MITD1Q8WV92 249 aa9.48□□□□□ -0.89
NUDCD3-201ENST00000338427 IGF2BP2-AS1Q96M15 143 aa9.48□□□□□ -0.89
NUDCD3-201ENST00000338427 SEC22CQ9BRL7 303 aa9.48□□□□□ -0.89
NUDCD3-201ENST00000338427 TMEM208Q9BTX3 173 aa9.48□□□□□ -0.89
NUDCD3-201ENST00000338427 IGLV2-18A0A075B6J9 118 aa9.47□□□□□ -0.89
NUDCD3-201ENST00000338427 TRAV6A0A075B6T7 132 aa9.47□□□□□ -0.89
NUDCD3-201ENST00000338427 TMEM189A5PLL7 270 aa9.47□□□□□ -0.89
NUDCD3-201ENST00000338427 CENPXA8MT69 81 aa9.47□□□□□ -0.89
NUDCD3-201ENST00000338427 MRPS12O15235 138 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-201ENST00000338427 KIR3DS1Q14943 382 aa9.47□□□□□ -0.89
NUDCD3-201ENST00000338427 PSG3Q16557 428 aa9.47□□□□□ -0.89
NUDCD3-201ENST00000338427 MORN5Q5VZ52 161 aa9.47□□□□□ -0.89
NUDCD3-201ENST00000338427 OR10P1Q8NGE3 313 aa9.47□□□□□ -0.89
NUDCD3-201ENST00000338427 ARV1Q9H2C2 271 aa9.47□□□□□ -0.89
NUDCD3-201ENST00000338427 PKD1P98161 4303 aa9.47□□□□□ -0.89
NUDCD3-201ENST00000338427 FAM24AA6NFZ4 105 aa9.46□□□□□ -0.9
NUDCD3-201ENST00000338427 FAM25EA8MYX2 175 aa9.46□□□□□ -0.9
NUDCD3-201ENST00000338427 PRAC2D3DTV9 90 aa9.46□□□□□ -0.9
NUDCD3-201ENST00000338427 AGPAT2O15120 278 aa9.46□□□□□ -0.9
NUDCD3-201ENST00000338427 RTL8CO15255 209 aa9.46□□□□□ -0.9
NUDCD3-201ENST00000338427 DUSP14O95147 198 aaKnown RBP9.46□□□□□ -0.9
NUDCD3-201ENST00000338427 CXCL3P19876 107 aa9.46□□□□□ -0.9
NUDCD3-201ENST00000338427 RHOBP62745 196 aa9.46□□□□□ -0.9
NUDCD3-201ENST00000338427 HIST1H1AQ02539 215 aaPredicted RBP9.46□□□□□ -0.9
NUDCD3-201ENST00000338427 GPR82Q96P67 336 aa9.46□□□□□ -0.9
NUDCD3-201ENST00000338427 PARD6GQ9BYG4 376 aaPredicted RBP9.46□□□□□ -0.9
NUDCD3-201ENST00000338427 LSM5Q9Y4Y9 91 aaKnown RBP9.46□□□□□ -0.9
NUDCD3-201ENST00000338427 TRAV5A0A0B4J249 113 aa9.45□□□□□ -0.9
NUDCD3-201ENST00000338427 GOSR2O14653 212 aa9.45□□□□□ -0.9
NUDCD3-201ENST00000338427 LYRM1O43325 122 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms