RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 RYR3Q15413 4870 aa20.13■□□□□ 0.81
ATPAF1-201ENST00000329231 IGSF23A1L1A6 192 aa20.12■□□□□ 0.81
ATPAF1-201ENST00000329231 E5RGE8 158 aa20.12■□□□□ 0.81
ATPAF1-201ENST00000329231 H3BRN7 92 aa20.12■□□□□ 0.81
ATPAF1-201ENST00000329231 OR5G3P0C626 314 aa20.12■□□□□ 0.81
ATPAF1-201ENST00000329231 LRRC37A5PQ49AS3 106 aa20.12■□□□□ 0.81
ATPAF1-201ENST00000329231 FOXI2Q6ZQN5 318 aa20.12■□□□□ 0.81
ATPAF1-201ENST00000329231 ZNF546Q86UE3 836 aa20.12■□□□□ 0.81
ATPAF1-201ENST00000329231 C16orf92Q96LL3 132 aa20.12■□□□□ 0.81
ATPAF1-201ENST00000329231 SCRT1Q9BWW7 348 aa20.12■□□□□ 0.81
ATPAF1-201ENST00000329231 C1QTNF4Q9BXJ3 329 aa20.12■□□□□ 0.81
ATPAF1-201ENST00000329231 TENM2Q9NT68 2774 aa20.12■□□□□ 0.81
ATPAF1-201ENST00000329231 PXDC1Q5TGL8 231 aa20.11■□□□□ 0.81
ATPAF1-201ENST00000329231 PPP1R1CQ8WVI7 109 aa20.11■□□□□ 0.81
ATPAF1-201ENST00000329231 SAV1Q9H4B6 383 aaPredicted RBP20.11■□□□□ 0.81
ATPAF1-201ENST00000329231 NUPR2A6NF83 97 aa20.1■□□□□ 0.81
ATPAF1-201ENST00000329231 JTBO76095 146 aa20.1■□□□□ 0.81
ATPAF1-201ENST00000329231 S100A11P31949 105 aa20.1■□□□□ 0.81
ATPAF1-201ENST00000329231 HBG1P69891 147 aa20.1■□□□□ 0.81
ATPAF1-201ENST00000329231 HBG2P69892 147 aa20.1■□□□□ 0.81
ATPAF1-201ENST00000329231 SPATA31B1PQ5VZV4 182 aa20.1■□□□□ 0.81
ATPAF1-201ENST00000329231 ARL6Q9H0F7 186 aa20.1■□□□□ 0.81
ATPAF1-201ENST00000329231 OR5AC2Q9NZP5 309 aa20.1■□□□□ 0.81
ATPAF1-201ENST00000329231 RNF24Q9Y225 148 aa20.1■□□□□ 0.81
ATPAF1-201ENST00000329231 H0YIZ8 118 aa20.09■□□□□ 0.81
ATPAF1-201ENST00000329231 AGPAT2O15120 278 aa20.09■□□□□ 0.81
ATPAF1-201ENST00000329231 RPL7P18124 248 aaKnown RBP20.09■□□□□ 0.81
ATPAF1-201ENST00000329231 CSNK1G2-AS1Q8NCQ2 148 aa20.09■□□□□ 0.81
ATPAF1-201ENST00000329231 CLEC5AQ9NY25 188 aa20.09■□□□□ 0.81
ATPAF1-201ENST00000329231 DYNC2H1Q8NCM8 4307 aaKnown RBP20.09■□□□□ 0.81
ATPAF1-201ENST00000329231 RAB31Q13636 194 aa20.08■□□□□ 0.81
ATPAF1-201ENST00000329231 GDF5OSQ5U4N7 250 aa20.08■□□□□ 0.81
ATPAF1-201ENST00000329231 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.08■□□□□ 0.81
ATPAF1-201ENST00000329231 UHRF2Q96PU4 802 aa20.08■□□□□ 0.81
ATPAF1-201ENST00000329231 SLC25A31Q9H0C2 315 aa20.08■□□□□ 0.81
ATPAF1-201ENST00000329231 RPRMQ9NS64 109 aa20.08■□□□□ 0.81
ATPAF1-201ENST00000329231 UQCC1Q9NVA1 299 aa20.08■□□□□ 0.81
ATPAF1-201ENST00000329231 ZNF705EA8MWA4 302 aaPredicted RBP20.07■□□□□ 0.8
ATPAF1-201ENST00000329231 PET100P0DJ07 73 aa20.07■□□□□ 0.8
ATPAF1-201ENST00000329231 MIFP14174 115 aa20.07■□□□□ 0.8
ATPAF1-201ENST00000329231 DEFB1P60022 68 aa20.07■□□□□ 0.8
ATPAF1-201ENST00000329231 ATP6V1FQ16864 119 aa20.07■□□□□ 0.8
ATPAF1-201ENST00000329231 VWC2Q2TAL6 325 aa20.07■□□□□ 0.8
ATPAF1-201ENST00000329231 EBLN2Q6P2I7 272 aa20.07■□□□□ 0.8
ATPAF1-201ENST00000329231 C17orf77Q96MU5 243 aa20.07■□□□□ 0.8
ATPAF1-201ENST00000329231 CLUHP3Q96NS8 147 aa20.07■□□□□ 0.8
ATPAF1-201ENST00000329231 MGST2Q99735 147 aa20.07■□□□□ 0.8
ATPAF1-201ENST00000329231 MFFQ9GZY8 342 aa20.07■□□□□ 0.8
ATPAF1-201ENST00000329231 MED28Q9H204 178 aa20.07■□□□□ 0.8
ATPAF1-201ENST00000329231 ARV1Q9H2C2 271 aa20.07■□□□□ 0.8
ATPAF1-201ENST00000329231 DEFB4AO15263 64 aa20.06■□□□□ 0.8
ATPAF1-201ENST00000329231 MPC2O95563 127 aa20.06■□□□□ 0.8
ATPAF1-201ENST00000329231 CEMP1Q6PRD7 247 aaPredicted RBP20.06■□□□□ 0.8
ATPAF1-201ENST00000329231 PATE2Q6UY27 113 aa20.06■□□□□ 0.8
ATPAF1-201ENST00000329231 Q8NAQ8 132 aa20.06■□□□□ 0.8
ATPAF1-201ENST00000329231 C11orf45Q8TAV5 145 aa20.06■□□□□ 0.8
ATPAF1-201ENST00000329231 XCL2Q9UBD3 114 aa20.06■□□□□ 0.8
ATPAF1-201ENST00000329231 IGKV3-20P01619 116 aa20.05■□□□□ 0.8
ATPAF1-201ENST00000329231 CXCL3P19876 107 aa20.05■□□□□ 0.8
ATPAF1-201ENST00000329231 OXA1LQ15070 435 aa20.05■□□□□ 0.8
ATPAF1-201ENST00000329231 OR4B1Q8NGF8 309 aa20.05■□□□□ 0.8
ATPAF1-201ENST00000329231 C20orf173Q96LM9 149 aa20.05■□□□□ 0.8
ATPAF1-201ENST00000329231 RNF126Q9BV68 326 aa20.05■□□□□ 0.8
ATPAF1-201ENST00000329231 WDR83OSQ9Y284 106 aa20.05■□□□□ 0.8
ATPAF1-201ENST00000329231 CAMLGP49069 296 aa20.04■□□□□ 0.8
ATPAF1-201ENST00000329231 FGL1Q08830 312 aa20.04■□□□□ 0.8
ATPAF1-201ENST00000329231 KLK5Q9Y337 293 aaPredicted RBP20.04■□□□□ 0.8
ATPAF1-201ENST00000329231 X6R8D5 127 aa20.04■□□□□ 0.8
ATPAF1-201ENST00000329231 IGHV4-28A0A0C4DH34 117 aa20.03■□□□□ 0.8
ATPAF1-201ENST00000329231 NHLH2Q02577 135 aa20.03■□□□□ 0.8
ATPAF1-201ENST00000329231 BAXQ07812 192 aa20.03■□□□□ 0.8
ATPAF1-201ENST00000329231 FCN2Q15485 313 aa20.03■□□□□ 0.8
ATPAF1-201ENST00000329231 ELOA3CA0A087WX78 387 aaPredicted RBP20.02■□□□□ 0.8
ATPAF1-201ENST00000329231 A0A0J9YX75 114 aa20.02■□□□□ 0.8
ATPAF1-201ENST00000329231 UBE2L5PA0A1B0GUS4 154 aa20.02■□□□□ 0.8
ATPAF1-201ENST00000329231 F6UB75 175 aa20.02■□□□□ 0.8
ATPAF1-201ENST00000329231 COX7A2P2O60397 106 aa20.02■□□□□ 0.8
ATPAF1-201ENST00000329231 NANOS2P60321 138 aaKnown RBP20.02■□□□□ 0.8
ATPAF1-201ENST00000329231 FAM78BQ5VT40 261 aa20.02■□□□□ 0.8
ATPAF1-201ENST00000329231 LINC00305Q7Z4B0 112 aa20.02■□□□□ 0.8
ATPAF1-201ENST00000329231 OR11H7Q8NGC8 314 aa20.02■□□□□ 0.8
ATPAF1-201ENST00000329231 PHLDA1Q8WV24 401 aaPredicted RBP20.02■□□□□ 0.8
ATPAF1-201ENST00000329231 A0A087X0K7 114 aa20.01■□□□□ 0.79
ATPAF1-201ENST00000329231 RBMY1A1P0DJD3 496 aaKnown RBP20.01■□□□□ 0.79
ATPAF1-201ENST00000329231 RBMY1CP0DJD4 496 aa20.01■□□□□ 0.79
ATPAF1-201ENST00000329231 PSG9Q00887 426 aa20.01■□□□□ 0.79
ATPAF1-201ENST00000329231 RBMY1FQ15415 496 aaKnown RBP20.01■□□□□ 0.79
ATPAF1-201ENST00000329231 Q6ZRG5 221 aa20.01■□□□□ 0.79
ATPAF1-201ENST00000329231 OR5C1Q8NGR4 320 aa20.01■□□□□ 0.79
ATPAF1-201ENST00000329231 TRAV8-2A0A0B4J237 113 aa20■□□□□ 0.79
ATPAF1-201ENST00000329231 SACSQ9NZJ4 4579 aa19.99■□□□□ 0.79
ATPAF1-201ENST00000329231 FXYD7P58549 80 aa19.99■□□□□ 0.79
ATPAF1-201ENST00000329231 C10orf113Q5VZT2 155 aa19.99■□□□□ 0.79
ATPAF1-201ENST00000329231 IGFL4Q6B9Z1 124 aa19.99■□□□□ 0.79
ATPAF1-201ENST00000329231 ZNF709Q8N972 641 aa19.99■□□□□ 0.79
ATPAF1-201ENST00000329231 LRRC20Q8TCA0 184 aa19.99■□□□□ 0.79
ATPAF1-201ENST00000329231 TMEM37Q8WXS4 190 aa19.99■□□□□ 0.79
ATPAF1-201ENST00000329231 HRH4Q9H3N8 390 aa19.99■□□□□ 0.79
ATPAF1-201ENST00000329231 MBD2Q9UBB5 411 aa19.99■□□□□ 0.79
ATPAF1-201ENST00000329231 MIC13Q5XKP0 118 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms