RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 TMED3Q9Y3Q3 217 aa17.74■□□□□ 0.43
PPP4R4-202ENST00000328839 PRSS46E5RG02 174 aa17.73■□□□□ 0.43
PPP4R4-202ENST00000328839 H3BP45 60 aa17.73■□□□□ 0.43
PPP4R4-202ENST00000328839 M0R2Z0 102 aa17.73■□□□□ 0.43
PPP4R4-202ENST00000328839 INSP01308 110 aa17.73■□□□□ 0.43
PPP4R4-202ENST00000328839 HOXB5P09067 269 aa17.73■□□□□ 0.43
PPP4R4-202ENST00000328839 S100A7P31151 101 aa17.73■□□□□ 0.43
PPP4R4-202ENST00000328839 CNN1P51911 297 aaKnown RBP17.73■□□□□ 0.43
PPP4R4-202ENST00000328839 TMEM182Q6ZP80 229 aaPredicted RBP17.73■□□□□ 0.43
PPP4R4-202ENST00000328839 C17orf77Q96MU5 243 aa17.73■□□□□ 0.43
PPP4R4-202ENST00000328839 GPR82Q96P67 336 aa17.73■□□□□ 0.43
PPP4R4-202ENST00000328839 A8MTW9 85 aa17.72■□□□□ 0.43
PPP4R4-202ENST00000328839 ZNF705GA8MUZ8 300 aaPredicted RBP17.72■□□□□ 0.43
PPP4R4-202ENST00000328839 DUSP14O95147 198 aaKnown RBP17.72■□□□□ 0.43
PPP4R4-202ENST00000328839 PRM2P04554 102 aa17.72■□□□□ 0.43
PPP4R4-202ENST00000328839 RNF182Q8N6D2 247 aa17.72■□□□□ 0.43
PPP4R4-202ENST00000328839 OR11H7Q8NGC8 314 aa17.72■□□□□ 0.43
PPP4R4-202ENST00000328839 OR4D5Q8NGN0 318 aa17.72■□□□□ 0.43
PPP4R4-202ENST00000328839 TRIM63Q969Q1 353 aa17.72■□□□□ 0.43
PPP4R4-202ENST00000328839 SMCO3A2RU48 225 aa17.71■□□□□ 0.43
PPP4R4-202ENST00000328839 H3BMQ9 156 aa17.71■□□□□ 0.43
PPP4R4-202ENST00000328839 SFT2D2O95562 160 aa17.71■□□□□ 0.43
PPP4R4-202ENST00000328839 PPP1R1AQ13522 171 aa17.71■□□□□ 0.43
PPP4R4-202ENST00000328839 C1orf134Q5TEV5 83 aa17.71■□□□□ 0.43
PPP4R4-202ENST00000328839 ACOT7LQ6ZUV0 252 aa17.71■□□□□ 0.43
PPP4R4-202ENST00000328839 STRAPQ9Y3F4 350 aaKnown RBP17.71■□□□□ 0.43
PPP4R4-202ENST00000328839 PKD1P98161 4303 aa17.71■□□□□ 0.43
PPP4R4-202ENST00000328839 C15orf53Q8NAA6 179 aa17.7■□□□□ 0.42
PPP4R4-202ENST00000328839 ZNF738Q8NE65 137 aa17.7■□□□□ 0.42
PPP4R4-202ENST00000328839 ATG101Q9BSB4 218 aa17.7■□□□□ 0.42
PPP4R4-202ENST00000328839 DEFB130BP0DP73 79 aa17.69■□□□□ 0.42
PPP4R4-202ENST00000328839 DEFB130AP0DP74 79 aa17.69■□□□□ 0.42
PPP4R4-202ENST00000328839 ZNF575Q86XF7 245 aa17.69■□□□□ 0.42
PPP4R4-202ENST00000328839 BAP18Q8IXM2 172 aa17.69■□□□□ 0.42
PPP4R4-202ENST00000328839 SLC25A21Q9BQT8 299 aaPredicted RBP17.69■□□□□ 0.42
PPP4R4-202ENST00000328839 TRAV8-2A0A0B4J237 113 aa17.68■□□□□ 0.42
PPP4R4-202ENST00000328839 CRXO43186 299 aaPredicted RBP17.68■□□□□ 0.42
PPP4R4-202ENST00000328839 DYNC1H1Q14204 4646 aaKnown RBP17.67■□□□□ 0.42
PPP4R4-202ENST00000328839 TRAV12-2A0A075B6T6 113 aa17.67■□□□□ 0.42
PPP4R4-202ENST00000328839 LYRM9A8MSI8 78 aa17.67■□□□□ 0.42
PPP4R4-202ENST00000328839 H3BRN7 92 aa17.67■□□□□ 0.42
PPP4R4-202ENST00000328839 IL5P05113 134 aa17.67■□□□□ 0.42
PPP4R4-202ENST00000328839 RAP2BP61225 183 aa17.67■□□□□ 0.42
PPP4R4-202ENST00000328839 CYP2G1PQ6ZSU1 146 aa17.67■□□□□ 0.42
PPP4R4-202ENST00000328839 SLC25A39Q9BZJ4 359 aaPredicted RBP17.67■□□□□ 0.42
PPP4R4-202ENST00000328839 HIGD1AQ9Y241 93 aa17.67■□□□□ 0.42
PPP4R4-202ENST00000328839 TMEM144Q7Z5S9 345 aa17.66■□□□□ 0.42
PPP4R4-202ENST00000328839 PPP1R14DQ9NXH3 145 aa17.66■□□□□ 0.42
PPP4R4-202ENST00000328839 RYR1P21817 5038 aa17.66■□□□□ 0.42
PPP4R4-202ENST00000328839 F5H768 121 aa17.65■□□□□ 0.42
PPP4R4-202ENST00000328839 BOLA2-SMG1P6H3BVE0 249 aa17.65■□□□□ 0.42
PPP4R4-202ENST00000328839 OR5G3P0C626 314 aa17.65■□□□□ 0.42
PPP4R4-202ENST00000328839 B2MP61769 119 aa17.65■□□□□ 0.42
PPP4R4-202ENST00000328839 RHOBP62745 196 aa17.65■□□□□ 0.42
PPP4R4-202ENST00000328839 HIST1H1AQ02539 215 aaPredicted RBP17.65■□□□□ 0.42
PPP4R4-202ENST00000328839 SHANK2-AS3Q9BTD1 123 aa17.65■□□□□ 0.42
PPP4R4-202ENST00000328839 V9GYH0 126 aa17.65■□□□□ 0.42
PPP4R4-202ENST00000328839 DNAH11Q96DT5 4516 aa17.65■□□□□ 0.42
PPP4R4-202ENST00000328839 HYPMO75409 117 aa17.64■□□□□ 0.41
PPP4R4-202ENST00000328839 NUDT3O95989 172 aa17.64■□□□□ 0.41
PPP4R4-202ENST00000328839 LINC00869P0C866 280 aa17.64■□□□□ 0.41
PPP4R4-202ENST00000328839 RPL7P18124 248 aaKnown RBP17.64■□□□□ 0.41
PPP4R4-202ENST00000328839 FAM3BP58499 235 aaPredicted RBP17.64■□□□□ 0.41
PPP4R4-202ENST00000328839 POLR2GP62487 172 aaKnown RBP eCLIP17.64■□□□□ 0.41
PPP4R4-202ENST00000328839 FCN2Q15485 313 aa17.64■□□□□ 0.41
PPP4R4-202ENST00000328839 LINC01587Q99440 93 aa17.64■□□□□ 0.41
PPP4R4-202ENST00000328839 PSENENQ9NZ42 101 aa17.64■□□□□ 0.41
PPP4R4-202ENST00000328839 ADAP1O75689 374 aa17.63■□□□□ 0.41
PPP4R4-202ENST00000328839 PRB4P10163 310 aaPredicted RBP17.63■□□□□ 0.41
PPP4R4-202ENST00000328839 HTN1P15515 57 aa17.63■□□□□ 0.41
PPP4R4-202ENST00000328839 AZU1P20160 251 aa17.63■□□□□ 0.41
PPP4R4-202ENST00000328839 LRRC20Q8TCA0 184 aa17.63■□□□□ 0.41
PPP4R4-202ENST00000328839 UHRF2Q96PU4 802 aa17.63■□□□□ 0.41
PPP4R4-202ENST00000328839 SSSCA1O60232 199 aa17.62■□□□□ 0.41
PPP4R4-202ENST00000328839 TSPOP30536 169 aa17.62■□□□□ 0.41
PPP4R4-202ENST00000328839 S100A5P33763 92 aa17.62■□□□□ 0.41
PPP4R4-202ENST00000328839 RRAS2P62070 204 aaPredicted RBP17.62■□□□□ 0.41
PPP4R4-202ENST00000328839 OR8A1Q8NGG7 326 aa17.61■□□□□ 0.41
PPP4R4-202ENST00000328839 DEDD2Q8WXF8 326 aa17.61■□□□□ 0.41
PPP4R4-202ENST00000328839 ATP5G1P05496 136 aa17.6■□□□□ 0.41
PPP4R4-202ENST00000328839 CXCL3P19876 107 aa17.6■□□□□ 0.41
PPP4R4-202ENST00000328839 ATP5G3P48201 142 aa17.6■□□□□ 0.41
PPP4R4-202ENST00000328839 ID3Q02535 119 aa17.6■□□□□ 0.41
PPP4R4-202ENST00000328839 PLAC8L1A1L4L8 177 aa17.59■□□□□ 0.41
PPP4R4-202ENST00000328839 C9orf170A2RU37 121 aa17.59■□□□□ 0.41
PPP4R4-202ENST00000328839 CCNKO75909 580 aa17.59■□□□□ 0.41
PPP4R4-202ENST00000328839 UBE2MP61081 183 aaKnown RBP17.59■□□□□ 0.41
PPP4R4-202ENST00000328839 SELENOTP62341 195 aa17.59■□□□□ 0.41
PPP4R4-202ENST00000328839 PSG3Q16557 428 aa17.59■□□□□ 0.41
PPP4R4-202ENST00000328839 TMEM256Q8N2U0 113 aa17.59■□□□□ 0.41
PPP4R4-202ENST00000328839 ARL6Q9H0F7 186 aa17.59■□□□□ 0.41
PPP4R4-202ENST00000328839 CCDC160A6NGH7 325 aa17.58■□□□□ 0.4
PPP4R4-202ENST00000328839 ANXA7P20073 488 aaKnown RBP17.58■□□□□ 0.4
PPP4R4-202ENST00000328839 PLP1P60201 277 aa17.58■□□□□ 0.4
PPP4R4-202ENST00000328839 S100A7AQ86SG5 101 aa17.58■□□□□ 0.4
PPP4R4-202ENST00000328839 A0A087X0K7 114 aa17.57■□□□□ 0.4
PPP4R4-202ENST00000328839 NBDYA0A0U1RRE5 68 aa17.57■□□□□ 0.4
PPP4R4-202ENST00000328839 SCGB1D2O95969 90 aa17.57■□□□□ 0.4
PPP4R4-202ENST00000328839 METTL15P1P0C7V9 234 aa17.57■□□□□ 0.4
PPP4R4-202ENST00000328839 INPP1P49441 399 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms