RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 UFSP1Q6NVU6 142 aa14.29□□□□□ -0.12
PRKCB-202ENST00000321728 JMJD8Q96S16 334 aa14.29□□□□□ -0.12
PRKCB-202ENST00000321728 ASCL2Q99929 193 aa14.29□□□□□ -0.12
PRKCB-202ENST00000321728 TRGV9Q99603 122 aa14.28□□□□□ -0.12
PRKCB-202ENST00000321728 POLEQ07864 2286 aa14.28□□□□□ -0.12
PRKCB-202ENST00000321728 LOC389332A0A1B0GUA5 103 aa14.28□□□□□ -0.12
PRKCB-202ENST00000321728 IGHV1-46P01743 117 aa14.28□□□□□ -0.12
PRKCB-202ENST00000321728 FAM106CPP0CH98 169 aa14.28□□□□□ -0.12
PRKCB-202ENST00000321728 FAM106AQ4KMX7 169 aa14.28□□□□□ -0.12
PRKCB-202ENST00000321728 RAB37Q96AX2 223 aa14.28□□□□□ -0.12
PRKCB-202ENST00000321728 DKK4Q9UBT3 224 aa14.28□□□□□ -0.12
PRKCB-202ENST00000321728 H3BRM9 83 aa14.28□□□□□ -0.12
PRKCB-202ENST00000321728 FGF6P10767 208 aa14.28□□□□□ -0.12
PRKCB-202ENST00000321728 C8orf46Q8TAG6 207 aa14.28□□□□□ -0.12
PRKCB-202ENST00000321728 OTORQ9NRC9 128 aa14.28□□□□□ -0.12
PRKCB-202ENST00000321728 IFI27P40305 119 aaPredicted RBP14.27□□□□□ -0.12
PRKCB-202ENST00000321728 RPRMLQ8N4K4 120 aa14.27□□□□□ -0.12
PRKCB-202ENST00000321728 C19orf67A6NJJ6 358 aa14.27□□□□□ -0.13
PRKCB-202ENST00000321728 ENSAO43768 121 aaKnown RBP14.27□□□□□ -0.13
PRKCB-202ENST00000321728 IGLV2-23P01705 113 aa14.27□□□□□ -0.13
PRKCB-202ENST00000321728 LYZP61626 148 aa14.27□□□□□ -0.13
PRKCB-202ENST00000321728 KIR3DS1Q14943 382 aa14.27□□□□□ -0.13
PRKCB-202ENST00000321728 VMA21Q3ZAQ7 101 aa14.27□□□□□ -0.13
PRKCB-202ENST00000321728 FAM169BQ8N8A8 192 aa14.27□□□□□ -0.13
PRKCB-202ENST00000321728 THYN1Q9P016 225 aa14.27□□□□□ -0.13
PRKCB-202ENST00000321728 HIGD1AQ9Y241 93 aa14.27□□□□□ -0.13
PRKCB-202ENST00000321728 PIEZO2Q9H5I5 2752 aa14.26□□□□□ -0.13
PRKCB-202ENST00000321728 TPRP12270 2363 aaKnown RBP14.26□□□□□ -0.13
PRKCB-202ENST00000321728 CSMD1Q96PZ7 3565 aa14.26□□□□□ -0.13
PRKCB-202ENST00000321728 A0A0G2JLM5 398 aa14.26□□□□□ -0.13
PRKCB-202ENST00000321728 IGLV2-11P01706 119 aa14.26□□□□□ -0.13
PRKCB-202ENST00000321728 PAX2Q02962 417 aa14.26□□□□□ -0.13
PRKCB-202ENST00000321728 RITA1Q96K30 269 aa14.26□□□□□ -0.13
PRKCB-202ENST00000321728 IGLV3-9A0A075B6K5 115 aa14.26□□□□□ -0.13
PRKCB-202ENST00000321728 SERTM2A0A1B0GWG4 89 aa14.26□□□□□ -0.13
PRKCB-202ENST00000321728 G3V4G9 280 aa14.26□□□□□ -0.13
PRKCB-202ENST00000321728 K7EP34 96 aa14.26□□□□□ -0.13
PRKCB-202ENST00000321728 LOXL1Q08397 574 aaPredicted RBP14.26□□□□□ -0.13
PRKCB-202ENST00000321728 WFDC8Q8IUA0 241 aa14.26□□□□□ -0.13
PRKCB-202ENST00000321728 OR2K2Q8NGT1 345 aa14.26□□□□□ -0.13
PRKCB-202ENST00000321728 M0R296 226 aa14.25□□□□□ -0.13
PRKCB-202ENST00000321728 CRYGCP07315 174 aa14.25□□□□□ -0.13
PRKCB-202ENST00000321728 A1L4Q6 167 aa14.25□□□□□ -0.13
PRKCB-202ENST00000321728 OVOL3O00110 214 aa14.25□□□□□ -0.13
PRKCB-202ENST00000321728 TNFRSF1AP19438 455 aa14.25□□□□□ -0.13
PRKCB-202ENST00000321728 IGHV3-72A0A0B4J1Y9 119 aa14.24□□□□□ -0.13
PRKCB-202ENST00000321728 FXYD7P58549 80 aa14.24□□□□□ -0.13
PRKCB-202ENST00000321728 CACNG7P62955 275 aa14.24□□□□□ -0.13
PRKCB-202ENST00000321728 CCL8P80075 99 aa14.24□□□□□ -0.13
PRKCB-202ENST00000321728 BOD1L2Q8IYS8 172 aa14.24□□□□□ -0.13
PRKCB-202ENST00000321728 TMEM200BQ69YZ2 307 aa14.23□□□□□ -0.13
PRKCB-202ENST00000321728 PIP4P2Q8N4L2 257 aa14.23□□□□□ -0.13
PRKCB-202ENST00000321728 A0A096LNJ9 63 aa14.23□□□□□ -0.13
PRKCB-202ENST00000321728 ZNF785A8K8V0 405 aa14.23□□□□□ -0.13
PRKCB-202ENST00000321728 D6R8Y8 96 aa14.23□□□□□ -0.13
PRKCB-202ENST00000321728 SMAD7O15105 426 aaKnown RBP14.23□□□□□ -0.13
PRKCB-202ENST00000321728 HSD52Q0P140 79 aa14.23□□□□□ -0.13
PRKCB-202ENST00000321728 C16orf54Q6UWD8 224 aa14.23□□□□□ -0.13
PRKCB-202ENST00000321728 ZADH2Q8N4Q0 377 aa14.23□□□□□ -0.13
PRKCB-202ENST00000321728 DEFB123Q8N688 67 aa14.23□□□□□ -0.13
PRKCB-202ENST00000321728 OR1N2Q8NGR9 330 aa14.23□□□□□ -0.13
PRKCB-202ENST00000321728 DPF1Q92782 380 aa14.23□□□□□ -0.13
PRKCB-202ENST00000321728 TIMM23BQ5SRD1 257 aa14.22□□□□□ -0.13
PRKCB-202ENST00000321728 TMEM186Q96B77 213 aa14.22□□□□□ -0.13
PRKCB-202ENST00000321728 SLC25A39Q9BZJ4 359 aaPredicted RBP14.22□□□□□ -0.13
PRKCB-202ENST00000321728 JKAMPQ9P055 326 aa14.22□□□□□ -0.13
PRKCB-202ENST00000321728 NMUP48645 174 aa14.22□□□□□ -0.13
PRKCB-202ENST00000321728 SIGLEC8Q9NYZ4 499 aa14.22□□□□□ -0.13
PRKCB-202ENST00000321728 MEF2CQ06413 473 aaPredicted RBP14.21□□□□□ -0.13
PRKCB-202ENST00000321728 PRSS57Q6UWY2 283 aa14.21□□□□□ -0.13
PRKCB-202ENST00000321728 SPCS1Q9Y6A9 102 aa14.21□□□□□ -0.13
PRKCB-202ENST00000321728 A0A1B0GW15 77 aa14.21□□□□□ -0.13
PRKCB-202ENST00000321728 APOBEC3AP31941 199 aaPredicted RBP14.21□□□□□ -0.13
PRKCB-202ENST00000321728 RPL27AP46776 148 aaKnown RBP14.21□□□□□ -0.13
PRKCB-202ENST00000321728 TEX36Q5VZQ5 186 aa14.21□□□□□ -0.13
PRKCB-202ENST00000321728 OR9G4Q8NGQ1 327 aa14.21□□□□□ -0.13
PRKCB-202ENST00000321728 ZNF883P0CG24 379 aa14.2□□□□□ -0.14
PRKCB-202ENST00000321728 LGALS9BQ3B8N2 356 aa14.2□□□□□ -0.14
PRKCB-202ENST00000321728 LGALS9CQ6DKI2 356 aa14.2□□□□□ -0.14
PRKCB-202ENST00000321728 ZNF474Q6S9Z5 364 aaPredicted RBP14.2□□□□□ -0.14
PRKCB-202ENST00000321728 C22orf34Q6ZV56 151 aa14.2□□□□□ -0.14
PRKCB-202ENST00000321728 AKAP13Q12802 2813 aa14.2□□□□□ -0.14
PRKCB-202ENST00000321728 PLP1P60201 277 aa14.2□□□□□ -0.14
PRKCB-202ENST00000321728 MRGPRG-AS1Q2M3A8 158 aa14.2□□□□□ -0.14
PRKCB-202ENST00000321728 C17orf77Q96MU5 243 aa14.2□□□□□ -0.14
PRKCB-202ENST00000321728 PRELID3AQ96N28 172 aa14.2□□□□□ -0.14
PRKCB-202ENST00000321728 F11RQ9Y624 299 aaKnown RBP14.2□□□□□ -0.14
PRKCB-202ENST00000321728 TMSB15BA0A087X1C1 80 aa14.19□□□□□ -0.14
PRKCB-202ENST00000321728 RBP4P02753 201 aa14.19□□□□□ -0.14
PRKCB-202ENST00000321728 SEM1Q6ZVN7 128 aa14.19□□□□□ -0.14
PRKCB-202ENST00000321728 PCP2Q8IVA1 136 aa14.19□□□□□ -0.14
PRKCB-202ENST00000321728 PSG8Q9UQ74 426 aa14.19□□□□□ -0.14
PRKCB-202ENST00000321728 A0A1W2PPM0 123 aa14.19□□□□□ -0.14
PRKCB-202ENST00000321728 TM4SF20Q53R12 229 aa14.19□□□□□ -0.14
PRKCB-202ENST00000321728 ADAMTSL5Q6ZMM2 481 aa14.19□□□□□ -0.14
PRKCB-202ENST00000321728 NEGR1Q7Z3B1 354 aa14.19□□□□□ -0.14
PRKCB-202ENST00000321728 OR4X2Q8NGF9 303 aa14.19□□□□□ -0.14
PRKCB-202ENST00000321728 ZNF414Q96IQ9 312 aa14.19□□□□□ -0.14
PRKCB-202ENST00000321728 K7EQM0 130 aa14.18□□□□□ -0.14
PRKCB-202ENST00000321728 HOXB4P17483 251 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms