RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 FCN3O75636 299 aa11.84□□□□□ -0.51
HOXA3-201ENST00000317201 KIR2DS2P43631 304 aa11.84□□□□□ -0.51
HOXA3-201ENST00000317201 RPL30P62888 115 aaKnown RBP11.84□□□□□ -0.51
HOXA3-201ENST00000317201 LYPD2Q6UXB3 125 aa11.84□□□□□ -0.51
HOXA3-201ENST00000317201 GPR82Q96P67 336 aa11.84□□□□□ -0.51
HOXA3-201ENST00000317201 SPXQ9BT56 116 aa11.84□□□□□ -0.51
HOXA3-201ENST00000317201 SSBP3Q9BWW4 388 aaPredicted RBP11.84□□□□□ -0.51
HOXA3-201ENST00000317201 NPIPB5A8MRT5 1133 aa11.83□□□□□ -0.52
HOXA3-201ENST00000317201 M0QXV9 152 aa11.83□□□□□ -0.52
HOXA3-201ENST00000317201 DUTP33316 252 aaKnown RBP11.83□□□□□ -0.52
HOXA3-201ENST00000317201 VDAC2P45880 294 aaPredicted RBP11.83□□□□□ -0.52
HOXA3-201ENST00000317201 ZNF134P52741 427 aa11.83□□□□□ -0.52
HOXA3-201ENST00000317201 TMEM155Q4W5P6 130 aa11.83□□□□□ -0.52
HOXA3-201ENST00000317201 TMEM200BQ69YZ2 307 aa11.83□□□□□ -0.52
HOXA3-201ENST00000317201 FOXI2Q6ZQN5 318 aa11.83□□□□□ -0.52
HOXA3-201ENST00000317201 OR52E5Q8NH55 327 aa11.83□□□□□ -0.52
HOXA3-201ENST00000317201 KALRNO60229 2985 aa11.83□□□□□ -0.52
HOXA3-201ENST00000317201 ICE1Q9Y2F5 2266 aa11.83□□□□□ -0.52
HOXA3-201ENST00000317201 K7ERJ3 54 aa11.83□□□□□ -0.52
HOXA3-201ENST00000317201 IGKV1-5P01602 117 aa11.83□□□□□ -0.52
HOXA3-201ENST00000317201 HLA-DQA1P01909 254 aa11.83□□□□□ -0.52
HOXA3-201ENST00000317201 P0C879 139 aa11.83□□□□□ -0.52
HOXA3-201ENST00000317201 FOXA3P55318 350 aaPredicted RBP11.83□□□□□ -0.52
HOXA3-201ENST00000317201 CT45A1Q5HYN5 189 aa11.83□□□□□ -0.52
HOXA3-201ENST00000317201 CT45A3Q8NHU0 189 aa11.83□□□□□ -0.52
HOXA3-201ENST00000317201 FAM90A26D6RGX4 464 aa11.82□□□□□ -0.52
HOXA3-201ENST00000317201 HLA-DRB1P01911 266 aa11.82□□□□□ -0.52
HOXA3-201ENST00000317201 SLC25A48Q6ZT89 311 aaKnown RBP11.82□□□□□ -0.52
HOXA3-201ENST00000317201 FGFRL1Q8N441 504 aa11.82□□□□□ -0.52
HOXA3-201ENST00000317201 TEX45Q8NA69 505 aa11.82□□□□□ -0.52
HOXA3-201ENST00000317201 ADTRPQ96IZ2 230 aa11.82□□□□□ -0.52
HOXA3-201ENST00000317201 COL6A6A6NMZ7 2263 aa11.82□□□□□ -0.52
HOXA3-201ENST00000317201 C19orf84I3L1E1 186 aa11.82□□□□□ -0.52
HOXA3-201ENST00000317201 PROP1O75360 226 aa11.82□□□□□ -0.52
HOXA3-201ENST00000317201 LEPROTL1O95214 131 aa11.82□□□□□ -0.52
HOXA3-201ENST00000317201 CAMPP49913 170 aa11.82□□□□□ -0.52
HOXA3-201ENST00000317201 BRWD1-AS2P59051 145 aa11.82□□□□□ -0.52
HOXA3-201ENST00000317201 SSBP2P81877 361 aaPredicted RBP11.82□□□□□ -0.52
HOXA3-201ENST00000317201 FAM120AOSQ5T036 256 aa11.82□□□□□ -0.52
HOXA3-201ENST00000317201 SYT8Q8NBV8 401 aa11.82□□□□□ -0.52
HOXA3-201ENST00000317201 HIVEP3Q5T1R4 2406 aa11.81□□□□□ -0.52
HOXA3-201ENST00000317201 FAM90A9PA6NNJ1 464 aa11.81□□□□□ -0.52
HOXA3-201ENST00000317201 LINC00473A8K010 186 aa11.81□□□□□ -0.52
HOXA3-201ENST00000317201 ARL14EPLP0DKL9 152 aa11.81□□□□□ -0.52
HOXA3-201ENST00000317201 COX8AP10176 69 aa11.81□□□□□ -0.52
HOXA3-201ENST00000317201 OSR1Q8TAX0 266 aaPredicted RBP11.81□□□□□ -0.52
HOXA3-201ENST00000317201 RAB1CQ92928 201 aa11.81□□□□□ -0.52
HOXA3-201ENST00000317201 TIMD4Q96H15 378 aa11.81□□□□□ -0.52
HOXA3-201ENST00000317201 URB1-AS1Q96HZ7 61 aa11.81□□□□□ -0.52
HOXA3-201ENST00000317201 ZNF331Q9NQX6 463 aaPredicted RBP11.81□□□□□ -0.52
HOXA3-201ENST00000317201 F11RQ9Y624 299 aaKnown RBP11.81□□□□□ -0.52
HOXA3-201ENST00000317201 A0A1W2PPV4 95 aa11.81□□□□□ -0.52
HOXA3-201ENST00000317201 DLX6P56179 175 aa11.81□□□□□ -0.52
HOXA3-201ENST00000317201 AMTNQ6UX39 209 aa11.81□□□□□ -0.52
HOXA3-201ENST00000317201 YTHDF2Q9Y5A9 579 aaKnown RBP11.81□□□□□ -0.52
HOXA3-201ENST00000317201 C17orf98A8MV24 154 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 H3BMG7 143 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 RRHO14718 337 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 ZNF138P52744 262 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 GDF5OSQ5U4N7 250 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 LINC00311Q8N616 119 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 C8orf46Q8TAG6 207 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 MBD6Q96DN6 1003 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 PPDPFQ9H3Y8 114 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 A0A1W2PPR1 153 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 RBP4P02753 201 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 COX19Q49B96 90 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 SPINK9Q5DT21 86 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 VGLL1Q99990 258 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 NPCDR1Q9BY65 106 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 ACACBO00763 2458 aa11.8□□□□□ -0.52
HOXA3-201ENST00000317201 PRTN3P24158 256 aa11.79□□□□□ -0.52
HOXA3-201ENST00000317201 GNG4P50150 75 aa11.79□□□□□ -0.52
HOXA3-201ENST00000317201 XGP55808 180 aa11.79□□□□□ -0.52
HOXA3-201ENST00000317201 PQLC2Q6ZP29 291 aa11.79□□□□□ -0.52
HOXA3-201ENST00000317201 NHLRC2Q8NBF2 726 aa11.79□□□□□ -0.52
HOXA3-201ENST00000317201 H1FXQ92522 213 aaKnown RBP11.79□□□□□ -0.52
HOXA3-201ENST00000317201 IGHV1-24A0A0C4DH33 117 aa11.79□□□□□ -0.52
HOXA3-201ENST00000317201 FAM168AQ92567 244 aa11.79□□□□□ -0.52
HOXA3-201ENST00000317201 LYNX1G3V0Z9 82 aa11.79□□□□□ -0.52
HOXA3-201ENST00000317201 SAA2P0DJI9 122 aaPredicted RBP11.79□□□□□ -0.52
HOXA3-201ENST00000317201 LYNX1P0DP58 116 aa11.79□□□□□ -0.52
HOXA3-201ENST00000317201 MFAP2P55001 183 aa11.79□□□□□ -0.52
HOXA3-201ENST00000317201 S1PR3Q99500 378 aa11.79□□□□□ -0.52
HOXA3-201ENST00000317201 IGSF10Q6WRI0 2623 aa11.78□□□□□ -0.52
HOXA3-201ENST00000317201 TIGITQ495A1 244 aa11.78□□□□□ -0.52
HOXA3-201ENST00000317201 GLMPQ8WWB7 406 aa11.78□□□□□ -0.52
HOXA3-201ENST00000317201 CYSLTR1Q9Y271 337 aa11.78□□□□□ -0.52
HOXA3-201ENST00000317201 CCDC179H3BU77 68 aa11.78□□□□□ -0.52
HOXA3-201ENST00000317201 IGHV3-7P01780 117 aa11.78□□□□□ -0.52
HOXA3-201ENST00000317201 RPL39P5Q59GN2 51 aa11.78□□□□□ -0.52
HOXA3-201ENST00000317201 CENPWQ5EE01 88 aa11.78□□□□□ -0.52
HOXA3-201ENST00000317201 CDIP1Q9H305 208 aa11.78□□□□□ -0.52
HOXA3-201ENST00000317201 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.78□□□□□ -0.52
HOXA3-201ENST00000317201 TIMM9Q9Y5J7 89 aa11.78□□□□□ -0.52
HOXA3-201ENST00000317201 CCL3L1P16619 93 aa11.77□□□□□ -0.53
HOXA3-201ENST00000317201 ZNF816Q0VGE8 651 aaPredicted RBP11.77□□□□□ -0.53
HOXA3-201ENST00000317201 ZNF833PQ6ZTB9 187 aa11.77□□□□□ -0.53
HOXA3-201ENST00000317201 UTF1Q5T230 341 aa11.77□□□□□ -0.53
HOXA3-201ENST00000317201 ZNF843Q8N446 348 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms