RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 DKK1O94907 266 aa17.13■□□□□ 0.33
KDM3B-201ENST00000314358 PLEKHB2Q96CS7 222 aa17.13■□□□□ 0.33
KDM3B-201ENST00000314358 RNF144BQ7Z419 303 aa17.13■□□□□ 0.33
KDM3B-201ENST00000314358 DLX4Q92988 240 aaPredicted RBP17.12■□□□□ 0.33
KDM3B-201ENST00000314358 LINC00479Q96M42 142 aa17.12■□□□□ 0.33
KDM3B-201ENST00000314358 C3orf79P0CE67 100 aa17.12■□□□□ 0.33
KDM3B-201ENST00000314358 ZNRD1Q9P1U0 126 aa17.12■□□□□ 0.33
KDM3B-201ENST00000314358 NDUFS6O75380 124 aaKnown RBP17.12■□□□□ 0.33
KDM3B-201ENST00000314358 TIMM21Q9BVV7 248 aa17.12■□□□□ 0.33
KDM3B-201ENST00000314358 SPINK8P0C7L1 97 aa17.11■□□□□ 0.33
KDM3B-201ENST00000314358 PFN2P35080 140 aa17.11■□□□□ 0.33
KDM3B-201ENST00000314358 ADAMTSL5Q6ZMM2 481 aa17.11■□□□□ 0.33
KDM3B-201ENST00000314358 LINC01551Q86U37 167 aa17.11■□□□□ 0.33
KDM3B-201ENST00000314358 ARID2Q68CP9 1835 aa17.1■□□□□ 0.33
KDM3B-201ENST00000314358 COLCA2A8K830 154 aa17.1■□□□□ 0.33
KDM3B-201ENST00000314358 PSME4Q14997 1843 aa17.1■□□□□ 0.33
KDM3B-201ENST00000314358 NTF4P34130 210 aa17.1■□□□□ 0.33
KDM3B-201ENST00000314358 ZC2HC1BQ5TFG8 222 aa17.1■□□□□ 0.33
KDM3B-201ENST00000314358 SLC25A48Q6ZT89 311 aaKnown RBP17.1■□□□□ 0.33
KDM3B-201ENST00000314358 FANCMQ8IYD8 2048 aa17.1■□□□□ 0.33
KDM3B-201ENST00000314358 VCYO14598 125 aa17.09■□□□□ 0.33
KDM3B-201ENST00000314358 TCF15Q12870 199 aa17.09■□□□□ 0.33
KDM3B-201ENST00000314358 TRAV25A0A0B4J276 109 aa17.09■□□□□ 0.33
KDM3B-201ENST00000314358 ZNF236Q9UL36 1845 aa17.09■□□□□ 0.33
KDM3B-201ENST00000314358 FGF16O43320 207 aa17.09■□□□□ 0.33
KDM3B-201ENST00000314358 PRSS57Q6UWY2 283 aa17.08■□□□□ 0.33
KDM3B-201ENST00000314358 A0A1B0GWJ7 208 aa17.08■□□□□ 0.33
KDM3B-201ENST00000314358 SYNJ2BPP57105 145 aa17.08■□□□□ 0.33
KDM3B-201ENST00000314358 RUSC1-AS1Q66K80 236 aa17.08■□□□□ 0.33
KDM3B-201ENST00000314358 KIF26BQ2KJY2 2108 aa17.08■□□□□ 0.32
KDM3B-201ENST00000314358 RPP25LQ8N5L8 163 aaKnown RBP17.08■□□□□ 0.32
KDM3B-201ENST00000314358 KLK9Q9UKQ9 250 aa17.08■□□□□ 0.32
KDM3B-201ENST00000314358 A0A1B0GUS0 222 aa17.08■□□□□ 0.32
KDM3B-201ENST00000314358 LYPD2Q6UXB3 125 aa17.08■□□□□ 0.32
KDM3B-201ENST00000314358 CRIPAKQ8N1N5 446 aa17.08■□□□□ 0.32
KDM3B-201ENST00000314358 TRAV12-1A0A0B4J245 112 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 SMPXQ9UHP9 88 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 LINC00473A8K010 186 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 SYS1-DBNDD2H3BUS1 97 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 SS18Q15532 418 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 KLF12Q9Y4X4 402 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 GAGE12JA6NER3 117 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 CD59P13987 128 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 GAGE1Q13065 139 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 GAGE4Q13068 117 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 GAGE5Q13069 117 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 C8orf49Q96NF6 230 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 DOCK10Q96BY6 2186 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 IGKV1-5P01602 117 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 CHAC1Q9BUX1 264 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 DOPEY2Q9Y3R5 2298 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 IGHV3-38A0A0C4DH36 116 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 ASPHD1Q5U4P2 390 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 CYTL1Q9NRR1 136 aa17.07■□□□□ 0.32
KDM3B-201ENST00000314358 A0A096LPF7 62 aa17.06■□□□□ 0.32
KDM3B-201ENST00000314358 DLEU1O43261 78 aa17.06■□□□□ 0.32
KDM3B-201ENST00000314358 RPRMLQ8N4K4 120 aa17.06■□□□□ 0.32
KDM3B-201ENST00000314358 XCL2Q9UBD3 114 aa17.06■□□□□ 0.32
KDM3B-201ENST00000314358 CEP250Q9BV73 2442 aa17.06■□□□□ 0.32
KDM3B-201ENST00000314358 SNHG12Q9BXW3 62 aa17.06■□□□□ 0.32
KDM3B-201ENST00000314358 TMEM178BH3BS89 294 aa17.06■□□□□ 0.32
KDM3B-201ENST00000314358 Q71RC1 249 aaPredicted RBP17.06■□□□□ 0.32
KDM3B-201ENST00000314358 SPSB3Q6PJ21 355 aa17.06■□□□□ 0.32
KDM3B-201ENST00000314358 NXPH4O95158 308 aa17.06■□□□□ 0.32
KDM3B-201ENST00000314358 CD5P06127 495 aa17.06■□□□□ 0.32
KDM3B-201ENST00000314358 SUPT4H1P63272 117 aaKnown RBP17.06■□□□□ 0.32
KDM3B-201ENST00000314358 H0YJW9 148 aa17.05■□□□□ 0.32
KDM3B-201ENST00000314358 PATJQ8NI35 1801 aa17.05■□□□□ 0.32
KDM3B-201ENST00000314358 MRPS18CQ9Y3D5 142 aaKnown RBP17.05■□□□□ 0.32
KDM3B-201ENST00000314358 LYPD3O95274 346 aa17.05■□□□□ 0.32
KDM3B-201ENST00000314358 CSRP1P21291 193 aaKnown RBP17.05■□□□□ 0.32
KDM3B-201ENST00000314358 YLPM1P49750 1951 aaKnown RBP17.05■□□□□ 0.32
KDM3B-201ENST00000314358 MYMXA0A1B0GTQ4 84 aa17.05■□□□□ 0.32
KDM3B-201ENST00000314358 EFNA2O43921 213 aa17.05■□□□□ 0.32
KDM3B-201ENST00000314358 RHPN1-AS1Q9BWJ2 59 aa17.05■□□□□ 0.32
KDM3B-201ENST00000314358 SDK2Q58EX2 2172 aa17.05■□□□□ 0.32
KDM3B-201ENST00000314358 DEFB131AP59861 70 aa17.05■□□□□ 0.32
KDM3B-201ENST00000314358 TNFRSF14Q92956 283 aa17.05■□□□□ 0.32
KDM3B-201ENST00000314358 KLHDC3Q9BQ90 382 aa17.05■□□□□ 0.32
KDM3B-201ENST00000314358 TMEM213A2RRL7 107 aa17.04■□□□□ 0.32
KDM3B-201ENST00000314358 MPZP25189 248 aa17.04■□□□□ 0.32
KDM3B-201ENST00000314358 C1orf194Q5T5A4 169 aa17.04■□□□□ 0.32
KDM3B-201ENST00000314358 TMEM126AQ9H061 195 aa17.04■□□□□ 0.32
KDM3B-201ENST00000314358 COL8A2P25067 703 aa17.04■□□□□ 0.32
KDM3B-201ENST00000314358 PMVKQ15126 192 aa17.04■□□□□ 0.32
KDM3B-201ENST00000314358 MORN5Q5VZ52 161 aa17.04■□□□□ 0.32
KDM3B-201ENST00000314358 RS1O15537 224 aa17.04■□□□□ 0.32
KDM3B-201ENST00000314358 CGB3P0DN86 165 aa17.04■□□□□ 0.32
KDM3B-201ENST00000314358 PI4KAP42356 2102 aa17.04■□□□□ 0.32
KDM3B-201ENST00000314358 DOCK4Q8N1I0 1966 aa17.03■□□□□ 0.32
KDM3B-201ENST00000314358 F5H768 121 aa17.03■□□□□ 0.32
KDM3B-201ENST00000314358 OVOL3O00110 214 aa17.03■□□□□ 0.32
KDM3B-201ENST00000314358 TRAV26-2A0A0B4J265 109 aa17.03■□□□□ 0.32
KDM3B-201ENST00000314358 GAGE12BA1L429 117 aa17.03■□□□□ 0.32
KDM3B-201ENST00000314358 BUB1B-PAK6H3BSN5 160 aa17.03■□□□□ 0.32
KDM3B-201ENST00000314358 TRBV7-1A0A0A6YYK4 115 aa17.03■□□□□ 0.32
KDM3B-201ENST00000314358 RBMY1FQ15415 496 aaKnown RBP17.03■□□□□ 0.32
KDM3B-201ENST00000314358 ANXA2RQ3ZCQ2 193 aa17.03■□□□□ 0.32
KDM3B-201ENST00000314358 CLPSL2Q6UWE3 100 aa17.03■□□□□ 0.32
KDM3B-201ENST00000314358 E9PLN8 166 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms