RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 S100A7L2Q5SY68 101 aa6.72□□□□□ -1.33
VPS41-202ENST00000310301 LYZL1Q6UWQ5 148 aa6.72□□□□□ -1.33
VPS41-202ENST00000310301 MRAPQ8TCY5 172 aa6.72□□□□□ -1.33
VPS41-202ENST00000310301 DEFB104AQ8WTQ1 72 aa6.72□□□□□ -1.33
VPS41-202ENST00000310301 GGTLC1Q9BX51 225 aa6.72□□□□□ -1.33
VPS41-202ENST00000310301 NOTCH4Q99466 2003 aa6.72□□□□□ -1.33
VPS41-202ENST00000310301 ZNF497Q6ZNH5 498 aa6.72□□□□□ -1.33
VPS41-202ENST00000310301 RPP25LQ8N5L8 163 aaKnown RBP6.72□□□□□ -1.33
VPS41-202ENST00000310301 Q96MF0 132 aa6.72□□□□□ -1.33
VPS41-202ENST00000310301 REPIN1Q9BWE0 567 aaKnown RBP6.72□□□□□ -1.33
VPS41-202ENST00000310301 TMEM86BQ8N661 226 aa6.72□□□□□ -1.33
VPS41-202ENST00000310301 PLEKHB2Q96CS7 222 aa6.72□□□□□ -1.33
VPS41-202ENST00000310301 ZNF625Q96I27 306 aaPredicted RBP6.72□□□□□ -1.33
VPS41-202ENST00000310301 LAMTOR3Q9UHA4 124 aa6.72□□□□□ -1.33
VPS41-202ENST00000310301 NBASA2RRP1 2371 aa6.71□□□□□ -1.33
VPS41-202ENST00000310301 TRGV2A0A075B6R0 118 aa6.71□□□□□ -1.33
VPS41-202ENST00000310301 TCRAP04437 139 aa6.71□□□□□ -1.33
VPS41-202ENST00000310301 WT1P19544 449 aaPredicted RBP6.71□□□□□ -1.33
VPS41-202ENST00000310301 C8orf46Q8TAG6 207 aa6.71□□□□□ -1.33
VPS41-202ENST00000310301 DPM3Q9P2X0 92 aa6.71□□□□□ -1.33
VPS41-202ENST00000310301 ZNF318Q5VUA4 2279 aa6.71□□□□□ -1.33
VPS41-202ENST00000310301 C9orf118A6NHY6 69 aa6.71□□□□□ -1.33
VPS41-202ENST00000310301 YPEL1O60688 119 aa6.71□□□□□ -1.33
VPS41-202ENST00000310301 PRCDQ00LT1 54 aa6.71□□□□□ -1.33
VPS41-202ENST00000310301 GAGE1Q13065 139 aa6.71□□□□□ -1.33
VPS41-202ENST00000310301 MORN2Q502X0 79 aa6.71□□□□□ -1.33
VPS41-202ENST00000310301 YPEL2Q96QA6 119 aa6.71□□□□□ -1.33
VPS41-202ENST00000310301 DIDO1Q9BTC0 2240 aaKnown RBP6.71□□□□□ -1.34
VPS41-202ENST00000310301 IGKV2-40A0A087WW87 121 aaPredicted RBP6.71□□□□□ -1.34
VPS41-202ENST00000310301 A0A1B0GUS0 222 aa6.71□□□□□ -1.34
VPS41-202ENST00000310301 VWC2LB2RUY7 222 aa6.71□□□□□ -1.34
VPS41-202ENST00000310301 DKK1O94907 266 aa6.71□□□□□ -1.34
VPS41-202ENST00000310301 IGKV2D-40P01614 121 aaPredicted RBP6.71□□□□□ -1.34
VPS41-202ENST00000310301 ZC2HC1BQ5TFG8 222 aa6.71□□□□□ -1.34
VPS41-202ENST00000310301 STPG4Q8N801 248 aa6.71□□□□□ -1.34
VPS41-202ENST00000310301 K7EP13 123 aa6.71□□□□□ -1.34
VPS41-202ENST00000310301 IFITM1P13164 125 aa6.71□□□□□ -1.34
VPS41-202ENST00000310301 RHOGP84095 191 aa6.71□□□□□ -1.34
VPS41-202ENST00000310301 ZNF837Q96EG3 531 aaPredicted RBP6.71□□□□□ -1.34
VPS41-202ENST00000310301 SCN2AQ99250 2005 aa6.71□□□□□ -1.34
VPS41-202ENST00000310301 DEFB113Q30KQ7 82 aa6.71□□□□□ -1.34
VPS41-202ENST00000310301 TMEM158Q8WZ71 300 aa6.71□□□□□ -1.34
VPS41-202ENST00000310301 LINC01549A6NIU2 74 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 H3BMM0 161 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 TFF1P04155 84 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 LHFPL1Q86WI0 220 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 FAM90A1Q86YD7 464 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 EXOC3-AS1Q8N2X6 119 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 UBE2WQ96B02 151 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 WDR81Q562E7 1941 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 FAM90A9PA6NNJ1 464 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 ADARB2-AS1A8MUL3 147 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 GAS1P54826 345 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 PRSS22Q9GZN4 317 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 LY96Q9Y6Y9 160 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 PSG7Q13046 419 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 CREBBPQ92793 2442 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 ACACBO00763 2458 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 PAX4O43316 350 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 AZU1P20160 251 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 C3orf36Q3SXR2 165 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 LINC00312Q9Y6C7 94 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 PTPRQQ9UMZ3 2332 aa6.7□□□□□ -1.34
VPS41-202ENST00000310301 PLA2G2AP14555 144 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 DUTP33316 252 aaKnown RBP6.69□□□□□ -1.34
VPS41-202ENST00000310301 WFDC12Q8WWY7 111 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 SPRY4Q9C004 299 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 GBF1Q92538 1859 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 IGHV1-18A0A0C4DH31 117 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 RNF223E7ERA6 249 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 Q0VG73 95 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 GGNQ86UU5 652 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 C2orf16Q68DN1 1984 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 ANKRD36A6QL64 1941 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 GAGE12HA6NDE8 117 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 C9JQL5 133 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 SMKR1H3BMG3 65 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 IGHV3-11P01762 117 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 SPTAN1Q13813 2472 aaKnown RBP6.69□□□□□ -1.34
VPS41-202ENST00000310301 IQCF6A8MYZ5 107 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 J3QLI3 93 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 K7EP34 96 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 PRB3Q04118 309 aaPredicted RBP6.69□□□□□ -1.34
VPS41-202ENST00000310301 MBNL3Q9NUK0 354 aaKnown RBP6.69□□□□□ -1.34
VPS41-202ENST00000310301 PTPRDP23468 1912 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 ANAPC1Q9H1A4 1944 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 MYO7BQ6PIF6 2116 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 F8W1H4 67 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 LILRA1O75019 489 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 CCL3L1P16619 93 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 SLC25A39Q9BZJ4 359 aaPredicted RBP6.69□□□□□ -1.34
VPS41-202ENST00000310301 JPT2Q9H910 190 aa6.69□□□□□ -1.34
VPS41-202ENST00000310301 FAM208BQ5VWN6 2430 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 HEATR5BQ9P2D3 2071 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 PMS2P5A8MQ11 134 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 NBR2O15453 112 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 TRACP01848 142 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 IGLC2P0DOY2 106 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 IGLC3P0DOY3 106 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 MST1LQ2TV78 715 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms