RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 TRAV5A0A0B4J249 113 aa9.64□□□□□ -0.87
APTX-201ENST00000309615 KANTRA0A1W2PQU2 76 aa9.64□□□□□ -0.87
APTX-201ENST00000309615 BCL2L11O43521 198 aa9.64□□□□□ -0.87
APTX-201ENST00000309615 CD7P09564 240 aa9.64□□□□□ -0.87
APTX-201ENST00000309615 DEFA6Q01524 100 aa9.64□□□□□ -0.87
APTX-201ENST00000309615 S100A7AQ86SG5 101 aa9.64□□□□□ -0.87
APTX-201ENST00000309615 SEPSECSQ9HD40 501 aaKnown RBP9.64□□□□□ -0.87
APTX-201ENST00000309615 SMAD5-AS1Q9Y6J3 95 aa9.64□□□□□ -0.87
APTX-201ENST00000309615 SORL1Q92673 2214 aa9.64□□□□□ -0.87
APTX-201ENST00000309615 DNASE2O00115 360 aaPredicted RBP9.64□□□□□ -0.87
APTX-201ENST00000309615 PFDN1O60925 122 aa9.64□□□□□ -0.87
APTX-201ENST00000309615 CD81P60033 236 aa9.64□□□□□ -0.87
APTX-201ENST00000309615 PAFAH1B2P68402 229 aa9.64□□□□□ -0.87
APTX-201ENST00000309615 FAM78BQ5VT40 261 aa9.64□□□□□ -0.87
APTX-201ENST00000309615 GTSCR1Q86UQ5 136 aa9.64□□□□□ -0.87
APTX-201ENST00000309615 DCANP1Q8TF63 244 aa9.64□□□□□ -0.87
APTX-201ENST00000309615 PSMG3Q9BT73 122 aaPredicted RBP9.64□□□□□ -0.87
APTX-201ENST00000309615 OR4C46A6NHA9 309 aa9.63□□□□□ -0.87
APTX-201ENST00000309615 GALR1P47211 349 aa9.63□□□□□ -0.87
APTX-201ENST00000309615 SPATA31B1PQ5VZV4 182 aa9.63□□□□□ -0.87
APTX-201ENST00000309615 Q8N1Y9 231 aa9.63□□□□□ -0.87
APTX-201ENST00000309615 GNPNAT1Q96EK6 184 aaPredicted RBP9.63□□□□□ -0.87
APTX-201ENST00000309615 C17orf77Q96MU5 243 aa9.63□□□□□ -0.87
APTX-201ENST00000309615 ZNF471Q9BX82 626 aaPredicted RBP9.63□□□□□ -0.87
APTX-201ENST00000309615 NRN1Q9NPD7 142 aa9.63□□□□□ -0.87
APTX-201ENST00000309615 K7EIL1 84 aa9.62□□□□□ -0.87
APTX-201ENST00000309615 RPL7P18124 248 aaKnown RBP9.62□□□□□ -0.87
APTX-201ENST00000309615 NKX2-5P52952 324 aaPredicted RBP9.62□□□□□ -0.87
APTX-201ENST00000309615 RAB2AP61019 212 aa9.62□□□□□ -0.87
APTX-201ENST00000309615 C9orf62Q8N4C0 152 aa9.62□□□□□ -0.87
APTX-201ENST00000309615 FAM24BQ8N5W8 94 aa9.62□□□□□ -0.87
APTX-201ENST00000309615 OR2G3Q8NGZ4 309 aa9.62□□□□□ -0.87
APTX-201ENST00000309615 GPR82Q96P67 336 aa9.62□□□□□ -0.87
APTX-201ENST00000309615 K7EQG2 157 aa9.62□□□□□ -0.87
APTX-201ENST00000309615 MRPS12O15235 138 aaKnown RBP9.62□□□□□ -0.87
APTX-201ENST00000309615 SNRPCP09234 159 aaKnown RBP9.62□□□□□ -0.87
APTX-201ENST00000309615 M6PRP20645 277 aa9.62□□□□□ -0.87
APTX-201ENST00000309615 MIR17HGQ75NE6 70 aa9.62□□□□□ -0.87
APTX-201ENST00000309615 WFDC10AQ9H1F0 79 aa9.62□□□□□ -0.87
APTX-201ENST00000309615 C19orf73Q9NVV2 129 aa9.62□□□□□ -0.87
APTX-201ENST00000309615 UBQLN2Q9UHD9 624 aa9.62□□□□□ -0.87
APTX-201ENST00000309615 RNF24Q9Y225 148 aa9.62□□□□□ -0.87
APTX-201ENST00000309615 TRAV2A0A0B4J234 112 aa9.61□□□□□ -0.87
APTX-201ENST00000309615 EIF3GO75821 320 aaKnown RBP eCLIP9.61□□□□□ -0.87
APTX-201ENST00000309615 SERF2P84101 59 aa9.61□□□□□ -0.87
APTX-201ENST00000309615 ACOT6Q3I5F7 207 aaPredicted RBP9.61□□□□□ -0.87
APTX-201ENST00000309615 ODF3L2Q3SX64 289 aa9.61□□□□□ -0.87
APTX-201ENST00000309615 BPIFA4PQ86YQ2 179 aa9.61□□□□□ -0.87
APTX-201ENST00000309615 SLC25A2Q9BXI2 301 aa9.61□□□□□ -0.87
APTX-201ENST00000309615 FUT9Q9Y231 359 aa9.61□□□□□ -0.87
APTX-201ENST00000309615 MEGF8Q7Z7M0 2845 aa9.61□□□□□ -0.87
APTX-201ENST00000309615 FBN3Q75N90 2809 aa9.6□□□□□ -0.87
APTX-201ENST00000309615 SPP1P10451 314 aa9.6□□□□□ -0.87
APTX-201ENST00000309615 ATF4P18848 351 aaPredicted RBP9.6□□□□□ -0.87
APTX-201ENST00000309615 RHOBP62745 196 aa9.6□□□□□ -0.87
APTX-201ENST00000309615 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.6□□□□□ -0.87
APTX-201ENST00000309615 OR10G4Q8NGN3 311 aa9.6□□□□□ -0.87
APTX-201ENST00000309615 OR10G9Q8NGN4 311 aa9.6□□□□□ -0.87
APTX-201ENST00000309615 OR10G7Q8NGN6 311 aa9.6□□□□□ -0.87
APTX-201ENST00000309615 FAM167A-AS1Q96KT0 104 aa9.6□□□□□ -0.87
APTX-201ENST00000309615 MRPL32Q9BYC8 188 aaKnown RBP9.6□□□□□ -0.87
APTX-201ENST00000309615 DNAH3Q8TD57 4116 aa9.6□□□□□ -0.87
APTX-201ENST00000309615 OR11H12B2RN74 326 aa9.59□□□□□ -0.87
APTX-201ENST00000309615 SOCS3O14543 225 aa9.59□□□□□ -0.87
APTX-201ENST00000309615 RPP25LQ8N5L8 163 aaKnown RBP9.59□□□□□ -0.87
APTX-201ENST00000309615 DEFB125Q8N687 156 aa9.59□□□□□ -0.87
APTX-201ENST00000309615 H3BQ15 152 aa9.59□□□□□ -0.87
APTX-201ENST00000309615 H3BTX0 84 aa9.59□□□□□ -0.87
APTX-201ENST00000309615 ZNF688P0C7X2 276 aa9.59□□□□□ -0.87
APTX-201ENST00000309615 IGLC2P0DOY2 106 aa9.59□□□□□ -0.87
APTX-201ENST00000309615 PYYP10082 97 aa9.59□□□□□ -0.87
APTX-201ENST00000309615 FAM122CQ6P4D5 195 aa9.59□□□□□ -0.87
APTX-201ENST00000309615 BAP18Q8IXM2 172 aa9.59□□□□□ -0.87
APTX-201ENST00000309615 MAP6D1Q9H9H5 199 aa9.59□□□□□ -0.87
APTX-201ENST00000309615 RPRMQ9NS64 109 aa9.59□□□□□ -0.87
APTX-201ENST00000309615 A0A087X0K7 114 aa9.58□□□□□ -0.88
APTX-201ENST00000309615 A0A1W2PPV4 95 aa9.58□□□□□ -0.88
APTX-201ENST00000309615 MBP02144 154 aa9.58□□□□□ -0.88
APTX-201ENST00000309615 ZNF124Q15973 351 aa9.58□□□□□ -0.88
APTX-201ENST00000309615 TMEM41BQ5BJD5 291 aa9.58□□□□□ -0.88
APTX-201ENST00000309615 DEFB121Q5J5C9 76 aa9.58□□□□□ -0.88
APTX-201ENST00000309615 APRG1Q8IVJ8 170 aa9.58□□□□□ -0.88
APTX-201ENST00000309615 STOML3Q8TAV4 291 aa9.58□□□□□ -0.88
APTX-201ENST00000309615 MRAPQ8TCY5 172 aa9.58□□□□□ -0.88
APTX-201ENST00000309615 HRH4Q9H3N8 390 aa9.58□□□□□ -0.88
APTX-201ENST00000309615 TMEM14CQ9P0S9 112 aa9.58□□□□□ -0.88
APTX-201ENST00000309615 HMGB3O15347 200 aaKnown RBP9.57□□□□□ -0.88
APTX-201ENST00000309615 IGHV4-30-4P0DP06 118 aa9.57□□□□□ -0.88
APTX-201ENST00000309615 TPT1P13693 172 aaKnown RBP9.57□□□□□ -0.88
APTX-201ENST00000309615 MEOX2P50222 304 aa9.57□□□□□ -0.88
APTX-201ENST00000309615 DEFB131AP59861 70 aa9.57□□□□□ -0.88
APTX-201ENST00000309615 SNRPD3P62318 126 aaKnown RBP9.57□□□□□ -0.88
APTX-201ENST00000309615 EIF5AP63241 154 aaKnown RBP9.57□□□□□ -0.88
APTX-201ENST00000309615 PSMG4Q5JS54 123 aa9.57□□□□□ -0.88
APTX-201ENST00000309615 IGFL4Q6B9Z1 124 aa9.57□□□□□ -0.88
APTX-201ENST00000309615 ZNF503Q96F45 646 aa9.57□□□□□ -0.88
APTX-201ENST00000309615 C16orf92Q96LL3 132 aa9.57□□□□□ -0.88
APTX-201ENST00000309615 CITED4Q96RK1 184 aa9.57□□□□□ -0.88
APTX-201ENST00000309615 FAM110AQ9BQ89 295 aa9.57□□□□□ -0.88
APTX-201ENST00000309615 ZNF586Q9NXT0 402 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms