RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 RPL12P30050 165 aaKnown RBP14.69□□□□□ -0.06
VEGFB-201ENST00000309422 NHLH2Q02577 135 aa14.69□□□□□ -0.06
VEGFB-201ENST00000309422 FCN2Q15485 313 aa14.69□□□□□ -0.06
VEGFB-201ENST00000309422 LINC00305Q7Z4B0 112 aa14.69□□□□□ -0.06
VEGFB-201ENST00000309422 FAM24BQ8N5W8 94 aa14.69□□□□□ -0.06
VEGFB-201ENST00000309422 CITED4Q96RK1 184 aa14.69□□□□□ -0.06
VEGFB-201ENST00000309422 H0YIZ8 118 aa14.68□□□□□ -0.06
VEGFB-201ENST00000309422 ISLRO14498 428 aa14.68□□□□□ -0.06
VEGFB-201ENST00000309422 GIPP09681 153 aaPredicted RBP14.68□□□□□ -0.06
VEGFB-201ENST00000309422 OXA1LQ15070 435 aa14.68□□□□□ -0.06
VEGFB-201ENST00000309422 ACTL10Q5JWF8 245 aa14.68□□□□□ -0.06
VEGFB-201ENST00000309422 Q6ZWC4 215 aa14.68□□□□□ -0.06
VEGFB-201ENST00000309422 SCGB1C1Q8TD33 95 aa14.68□□□□□ -0.06
VEGFB-201ENST00000309422 UHRF2Q96PU4 802 aa14.68□□□□□ -0.06
VEGFB-201ENST00000309422 ATP5SQ99766 215 aa14.68□□□□□ -0.06
VEGFB-201ENST00000309422 RSG1Q9BU20 258 aa14.68□□□□□ -0.06
VEGFB-201ENST00000309422 CSTL1Q9H114 145 aa14.68□□□□□ -0.06
VEGFB-201ENST00000309422 HSPB11Q9Y547 144 aa14.68□□□□□ -0.06
VEGFB-201ENST00000309422 PXMP4Q9Y6I8 212 aa14.68□□□□□ -0.06
VEGFB-201ENST00000309422 CXCL3P19876 107 aa14.67□□□□□ -0.06
VEGFB-201ENST00000309422 RPL29P47914 159 aaKnown RBP14.67□□□□□ -0.06
VEGFB-201ENST00000309422 NUTF2P61970 127 aaKnown RBP14.67□□□□□ -0.06
VEGFB-201ENST00000309422 OPCMLQ14982 345 aa14.67□□□□□ -0.06
VEGFB-201ENST00000309422 ZNF124Q15973 351 aa14.67□□□□□ -0.06
VEGFB-201ENST00000309422 TMEM41BQ5BJD5 291 aa14.67□□□□□ -0.06
VEGFB-201ENST00000309422 MIC13Q5XKP0 118 aa14.67□□□□□ -0.06
VEGFB-201ENST00000309422 NPCDR1Q9BY65 106 aa14.67□□□□□ -0.06
VEGFB-201ENST00000309422 SLC39A9Q9NUM3 307 aa14.67□□□□□ -0.06
VEGFB-201ENST00000309422 CA1P00915 261 aaPredicted RBP14.66□□□□□ -0.06
VEGFB-201ENST00000309422 SPP1P10451 314 aa14.66□□□□□ -0.06
VEGFB-201ENST00000309422 EBLN2Q6P2I7 272 aa14.66□□□□□ -0.06
VEGFB-201ENST00000309422 MORN3Q6PF18 240 aaPredicted RBP14.66□□□□□ -0.06
VEGFB-201ENST00000309422 BPIFA4PQ86YQ2 179 aa14.66□□□□□ -0.06
VEGFB-201ENST00000309422 RETNQ9HD89 108 aa14.66□□□□□ -0.06
VEGFB-201ENST00000309422 DNAJC4Q9NNZ3 241 aa14.66□□□□□ -0.06
VEGFB-201ENST00000309422 RPRMQ9NS64 109 aa14.66□□□□□ -0.06
VEGFB-201ENST00000309422 TP53TG1Q9Y2A0 90 aa14.66□□□□□ -0.06
VEGFB-201ENST00000309422 DEFB135Q30KP9 77 aa14.65□□□□□ -0.06
VEGFB-201ENST00000309422 OR11H7Q8NGC8 314 aa14.65□□□□□ -0.06
VEGFB-201ENST00000309422 SPRY2O43597 315 aa14.64□□□□□ -0.07
VEGFB-201ENST00000309422 SPATA31B1PQ5VZV4 182 aa14.64□□□□□ -0.07
VEGFB-201ENST00000309422 INO80EQ8NBZ0 244 aaPredicted RBP14.64□□□□□ -0.07
VEGFB-201ENST00000309422 GATAD1Q8WUU5 269 aa14.64□□□□□ -0.07
VEGFB-201ENST00000309422 CHAC2Q8WUX2 184 aa14.64□□□□□ -0.07
VEGFB-201ENST00000309422 RNF126Q9BV68 326 aa14.64□□□□□ -0.07
VEGFB-201ENST00000309422 SMIM3Q9BZL3 60 aa14.64□□□□□ -0.07
VEGFB-201ENST00000309422 KNCNA6PVL3 124 aa14.63□□□□□ -0.07
VEGFB-201ENST00000309422 PRR20EP86478 221 aa14.63□□□□□ -0.07
VEGFB-201ENST00000309422 PRR20CP86479 221 aa14.63□□□□□ -0.07
VEGFB-201ENST00000309422 PRR20DP86480 221 aa14.63□□□□□ -0.07
VEGFB-201ENST00000309422 PRR20BP86481 221 aa14.63□□□□□ -0.07
VEGFB-201ENST00000309422 PRR20AP86496 221 aa14.63□□□□□ -0.07
VEGFB-201ENST00000309422 ZNF266Q14584 549 aa14.63□□□□□ -0.07
VEGFB-201ENST00000309422 LCN15Q6UWW0 184 aa14.63□□□□□ -0.07
VEGFB-201ENST00000309422 FOXI2Q6ZQN5 318 aa14.63□□□□□ -0.07
VEGFB-201ENST00000309422 WDR61Q9GZS3 305 aaKnown RBP14.63□□□□□ -0.07
VEGFB-201ENST00000309422 HUWE1Q7Z6Z7 4374 aaKnown RBP14.63□□□□□ -0.07
VEGFB-201ENST00000309422 CXCL2P19875 107 aa14.62□□□□□ -0.07
VEGFB-201ENST00000309422 C1QTNF4Q9BXJ3 329 aa14.62□□□□□ -0.07
VEGFB-201ENST00000309422 LYL1P12980 280 aa14.61□□□□□ -0.07
VEGFB-201ENST00000309422 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.61□□□□□ -0.07
VEGFB-201ENST00000309422 TRPT1Q86TN4 253 aaKnown RBP14.61□□□□□ -0.07
VEGFB-201ENST00000309422 SLC50A1Q9BRV3 221 aa14.61□□□□□ -0.07
VEGFB-201ENST00000309422 A0A087X0K7 114 aa14.6□□□□□ -0.07
VEGFB-201ENST00000309422 HLA-DRB4P13762 266 aa14.6□□□□□ -0.07
VEGFB-201ENST00000309422 PATE2Q6UY27 113 aa14.6□□□□□ -0.07
VEGFB-201ENST00000309422 OR2T35Q8NGX2 323 aa14.6□□□□□ -0.07
VEGFB-201ENST00000309422 IL17DQ8TAD2 202 aa14.6□□□□□ -0.07
VEGFB-201ENST00000309422 TMEM37Q8WXS4 190 aa14.6□□□□□ -0.07
VEGFB-201ENST00000309422 HLA-DRB4X5D2U9 266 aa14.6□□□□□ -0.07
VEGFB-201ENST00000309422 FXYD6-FXYD2A0A087WZ82 144 aa14.6□□□□□ -0.07
VEGFB-201ENST00000309422 SOCS3O14543 225 aa14.6□□□□□ -0.07
VEGFB-201ENST00000309422 GUK1Q16774 197 aa14.6□□□□□ -0.07
VEGFB-201ENST00000309422 ZNF738Q8NE65 137 aa14.6□□□□□ -0.07
VEGFB-201ENST00000309422 RNF183Q96D59 192 aa14.6□□□□□ -0.07
VEGFB-201ENST00000309422 SAV1Q9H4B6 383 aaPredicted RBP14.6□□□□□ -0.07
VEGFB-201ENST00000309422 FAM78BQ5VT40 261 aa14.59□□□□□ -0.07
VEGFB-201ENST00000309422 OR4B1Q8NGF8 309 aa14.59□□□□□ -0.07
VEGFB-201ENST00000309422 OVOL2Q9BRP0 275 aa14.59□□□□□ -0.07
VEGFB-201ENST00000309422 MRPL32Q9BYC8 188 aaKnown RBP14.59□□□□□ -0.07
VEGFB-201ENST00000309422 CLEC5AQ9NY25 188 aa14.59□□□□□ -0.07
VEGFB-201ENST00000309422 DUSP14O95147 198 aaKnown RBP14.58□□□□□ -0.08
VEGFB-201ENST00000309422 AQP10Q96PS8 301 aa14.58□□□□□ -0.08
VEGFB-201ENST00000309422 H3BMM0 161 aa14.57□□□□□ -0.08
VEGFB-201ENST00000309422 MUC7Q8TAX7 377 aa14.57□□□□□ -0.08
VEGFB-201ENST00000309422 RARRES2Q99969 163 aa14.57□□□□□ -0.08
VEGFB-201ENST00000309422 PARD6GQ9BYG4 376 aaPredicted RBP14.57□□□□□ -0.08
VEGFB-201ENST00000309422 PPP1R14DQ9NXH3 145 aa14.57□□□□□ -0.08
VEGFB-201ENST00000309422 C3orf84H3BNL1 204 aa14.56□□□□□ -0.08
VEGFB-201ENST00000309422 IGKV3-20P01619 116 aa14.56□□□□□ -0.08
VEGFB-201ENST00000309422 FFAR4Q5NUL3 377 aa14.56□□□□□ -0.08
VEGFB-201ENST00000309422 HRH4Q9H3N8 390 aa14.56□□□□□ -0.08
VEGFB-201ENST00000309422 TAS2R45P59539 299 aa14.55□□□□□ -0.08
VEGFB-201ENST00000309422 TIMM9Q9Y5J7 89 aa14.55□□□□□ -0.08
VEGFB-201ENST00000309422 BORCS7-ASMTA0A0B4J1R7 106 aa14.54□□□□□ -0.08
VEGFB-201ENST00000309422 RHOBP62745 196 aa14.54□□□□□ -0.08
VEGFB-201ENST00000309422 ACOT6Q3I5F7 207 aaPredicted RBP14.54□□□□□ -0.08
VEGFB-201ENST00000309422 OR11H2Q8NH07 326 aa14.54□□□□□ -0.08
VEGFB-201ENST00000309422 EDA2RQ9HAV5 297 aa14.54□□□□□ -0.08
VEGFB-201ENST00000309422 COL7A1Q02388 2944 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms