RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 SLAQ13239 276 aa12.43□□□□□ -0.42
CHAF1A-201ENST00000301280 TEX43Q6ZNM6 134 aa12.43□□□□□ -0.42
CHAF1A-201ENST00000301280 C11orf42Q8N5U0 333 aa12.43□□□□□ -0.42
CHAF1A-201ENST00000301280 FAM167A-AS1Q96KT0 104 aa12.43□□□□□ -0.42
CHAF1A-201ENST00000301280 JKAMPQ9P055 326 aa12.43□□□□□ -0.42
CHAF1A-201ENST00000301280 C8orf31Q8N9H6 132 aa12.42□□□□□ -0.42
CHAF1A-201ENST00000301280 VPS13CQ709C8 3753 aa12.42□□□□□ -0.42
CHAF1A-201ENST00000301280 BRS3P32247 399 aa12.42□□□□□ -0.42
CHAF1A-201ENST00000301280 MAJINQ3KP22 176 aa12.42□□□□□ -0.42
CHAF1A-201ENST00000301280 IGSF10Q6WRI0 2623 aa12.42□□□□□ -0.42
CHAF1A-201ENST00000301280 IGKV1D-37A0A075B6S9 117 aa12.42□□□□□ -0.42
CHAF1A-201ENST00000301280 LOC389332A0A1B0GUA5 103 aa12.42□□□□□ -0.42
CHAF1A-201ENST00000301280 CLEC5AQ9NY25 188 aa12.42□□□□□ -0.42
CHAF1A-201ENST00000301280 DLEU1O43261 78 aa12.41□□□□□ -0.42
CHAF1A-201ENST00000301280 LGALS7P47929 136 aa12.41□□□□□ -0.42
CHAF1A-201ENST00000301280 LY6EQ16553 131 aa12.41□□□□□ -0.42
CHAF1A-201ENST00000301280 BRD3OSQ6XYD6 125 aa12.41□□□□□ -0.42
CHAF1A-201ENST00000301280 TP73-AS1Q9UF72 201 aa12.41□□□□□ -0.42
CHAF1A-201ENST00000301280 FBXL7Q9UJT9 491 aa12.41□□□□□ -0.42
CHAF1A-201ENST00000301280 P01737 135 aa12.41□□□□□ -0.42
CHAF1A-201ENST00000301280 PPIFP30405 207 aaKnown RBP12.41□□□□□ -0.42
CHAF1A-201ENST00000301280 LINC00322Q6ZN03 302 aaPredicted RBP12.41□□□□□ -0.42
CHAF1A-201ENST00000301280 DEFB104AQ8WTQ1 72 aa12.41□□□□□ -0.42
CHAF1A-201ENST00000301280 ADORA2A-AS1P86434 159 aa12.4□□□□□ -0.42
CHAF1A-201ENST00000301280 ZNF329Q86UD4 541 aa12.4□□□□□ -0.42
CHAF1A-201ENST00000301280 Q8TAT8 98 aa12.4□□□□□ -0.42
CHAF1A-201ENST00000301280 DPM3Q9P2X0 92 aa12.4□□□□□ -0.42
CHAF1A-201ENST00000301280 TRAV9-1A0A075B6T8 112 aa12.4□□□□□ -0.42
CHAF1A-201ENST00000301280 RPL11P62913 178 aaKnown RBP12.4□□□□□ -0.42
CHAF1A-201ENST00000301280 FAM71F2Q6NXP2 309 aa12.4□□□□□ -0.42
CHAF1A-201ENST00000301280 CDC42EP3Q9UKI2 254 aa12.4□□□□□ -0.42
CHAF1A-201ENST00000301280 C9JCJ5 164 aa12.4□□□□□ -0.42
CHAF1A-201ENST00000301280 DIRC3C9JPN6 131 aa12.4□□□□□ -0.42
CHAF1A-201ENST00000301280 CACNG8Q8WXS5 425 aa12.4□□□□□ -0.42
CHAF1A-201ENST00000301280 MIEN1Q9BRT3 115 aa12.4□□□□□ -0.42
CHAF1A-201ENST00000301280 EPDR1Q9UM22 224 aa12.4□□□□□ -0.42
CHAF1A-201ENST00000301280 A0A1W2PPR1 153 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 CHEK1O14757 476 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 HLA-DMBP28068 263 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 DYNAPQ8N1N2 210 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 NUP35Q8NFH5 326 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 BORCS7Q96B45 105 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 C20orf144Q9BQM9 153 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 VAMP8Q9BV40 100 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 CA7P43166 264 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 PVRIGQ6DKI7 326 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 WFDC3Q8IUB2 231 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 MAPK1IP1LQ8NDC0 245 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 FXYD5Q96DB9 178 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 TXN2Q99757 166 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 ANKRD17O75179 2603 aaKnown RBP12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 ESDP10768 282 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 CX3CL1P78423 397 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 ZNF586Q9NXT0 402 aa12.39□□□□□ -0.43
CHAF1A-201ENST00000301280 PSMB11A5LHX3 300 aa12.38□□□□□ -0.43
CHAF1A-201ENST00000301280 RPLP1P05386 114 aaKnown RBP12.38□□□□□ -0.43
CHAF1A-201ENST00000301280 FAM120AOSQ5T036 256 aa12.38□□□□□ -0.43
CHAF1A-201ENST00000301280 NRGNQ92686 78 aa12.38□□□□□ -0.43
CHAF1A-201ENST00000301280 ZFHX3Q15911 3703 aa12.38□□□□□ -0.43
CHAF1A-201ENST00000301280 M0R2Z0 102 aa12.38□□□□□ -0.43
CHAF1A-201ENST00000301280 SNAI2O43623 268 aa12.38□□□□□ -0.43
CHAF1A-201ENST00000301280 GPR183P32249 361 aa12.38□□□□□ -0.43
CHAF1A-201ENST00000301280 KLRB1Q12918 225 aa12.38□□□□□ -0.43
CHAF1A-201ENST00000301280 LCNL1Q6ZST4 164 aa12.38□□□□□ -0.43
CHAF1A-201ENST00000301280 VMO1Q7Z5L0 202 aa12.38□□□□□ -0.43
CHAF1A-201ENST00000301280 GOLT1BQ9Y3E0 138 aa12.38□□□□□ -0.43
CHAF1A-201ENST00000301280 JMJD1CQ15652 2540 aa12.38□□□□□ -0.43
CHAF1A-201ENST00000301280 A0A1W2PRE2 83 aa12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 GNLYP22749 145 aa12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 ZNF841Q6ZN19 808 aa12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 SSX8Q7RTT4 187 aa12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 SOX21Q9Y651 276 aaPredicted RBP12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 G3V318 75 aa12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 ZFP36P26651 326 aaKnown RBP12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 ETFRF1Q6IPR1 90 aa12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 LINC00311Q8N616 119 aa12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 SLC25A39Q9BZJ4 359 aaPredicted RBP12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 NRN1Q9NPD7 142 aa12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 IGKV2-40A0A087WW87 121 aaPredicted RBP12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 BMPR1BO00238 502 aa12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 SPRY2O43597 315 aa12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 IGKV2D-40P01614 121 aaPredicted RBP12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 BPESC1Q9GZL8 116 aa12.37□□□□□ -0.43
CHAF1A-201ENST00000301280 OR4F17Q8NGA8 305 aa12.36□□□□□ -0.43
CHAF1A-201ENST00000301280 NBR2O15453 112 aa12.36□□□□□ -0.43
CHAF1A-201ENST00000301280 C19orf24Q9BVV8 132 aa12.36□□□□□ -0.43
CHAF1A-201ENST00000301280 F11RQ9Y624 299 aaKnown RBP12.36□□□□□ -0.43
CHAF1A-201ENST00000301280 IGLV2-8P01709 118 aa12.36□□□□□ -0.43
CHAF1A-201ENST00000301280 DLX6P56179 175 aa12.36□□□□□ -0.43
CHAF1A-201ENST00000301280 Q6ZVH6 145 aa12.36□□□□□ -0.43
CHAF1A-201ENST00000301280 TMEM75Q8N9X5 138 aa12.36□□□□□ -0.43
CHAF1A-201ENST00000301280 IGLV1-47P01700 117 aa12.35□□□□□ -0.43
CHAF1A-201ENST00000301280 NDPQ00604 133 aa12.35□□□□□ -0.43
CHAF1A-201ENST00000301280 NHLH1Q02575 133 aa12.35□□□□□ -0.43
CHAF1A-201ENST00000301280 C21orf62-AS1Q17RA5 79 aa12.35□□□□□ -0.43
CHAF1A-201ENST00000301280 UNQ5815/PRO19632Q6UWF5 114 aa12.35□□□□□ -0.43
CHAF1A-201ENST00000301280 GPX1P07203 203 aa12.35□□□□□ -0.43
CHAF1A-201ENST00000301280 CTRLP40313 264 aa12.35□□□□□ -0.43
CHAF1A-201ENST00000301280 NACAE9PAV3 2078 aa12.35□□□□□ -0.43
CHAF1A-201ENST00000301280 LINC01548A6NM66 108 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms