RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 APOHP02749 345 aaPredicted RBP18.82■□□□□ 0.6
GTF2A1-201ENST00000298173 KRTAP10-3P60369 221 aa18.82■□□□□ 0.6
GTF2A1-201ENST00000298173 ICAM4Q14773 271 aa18.82■□□□□ 0.6
GTF2A1-201ENST00000298173 KHDC1LQ5JSQ8 128 aa18.82■□□□□ 0.6
GTF2A1-201ENST00000298173 TMEM231Q9H6L2 316 aa18.82■□□□□ 0.6
GTF2A1-201ENST00000298173 ZNF207O43670 478 aaKnown RBP18.81■□□□□ 0.6
GTF2A1-201ENST00000298173 PAGE4O60829 102 aa18.81■□□□□ 0.6
GTF2A1-201ENST00000298173 HOXD3P31249 432 aaPredicted RBP18.81■□□□□ 0.6
GTF2A1-201ENST00000298173 PEA15Q15121 130 aa18.81■□□□□ 0.6
GTF2A1-201ENST00000298173 DEFB136Q30KP8 78 aa18.81■□□□□ 0.6
GTF2A1-201ENST00000298173 BPIFA4PQ86YQ2 179 aa18.81■□□□□ 0.6
GTF2A1-201ENST00000298173 OR11H1Q8NG94 326 aa18.81■□□□□ 0.6
GTF2A1-201ENST00000298173 VAX2Q9UIW0 290 aa18.81■□□□□ 0.6
GTF2A1-201ENST00000298173 ZNF320A2RRD8 509 aa18.8■□□□□ 0.6
GTF2A1-201ENST00000298173 ZP3P21754 424 aa18.8■□□□□ 0.6
GTF2A1-201ENST00000298173 TAGLN2P37802 199 aaKnown RBP18.8■□□□□ 0.6
GTF2A1-201ENST00000298173 UBE2L3P68036 154 aaKnown RBP18.8■□□□□ 0.6
GTF2A1-201ENST00000298173 OR1N2Q8NGR9 330 aa18.8■□□□□ 0.6
GTF2A1-201ENST00000298173 LINC01619G3V211 115 aa18.79■□□□□ 0.6
GTF2A1-201ENST00000298173 LGALS9O00182 355 aa18.79■□□□□ 0.6
GTF2A1-201ENST00000298173 FOXL1Q12952 345 aa18.79■□□□□ 0.6
GTF2A1-201ENST00000298173 KLF5Q13887 457 aaPredicted RBP18.79■□□□□ 0.6
GTF2A1-201ENST00000298173 C1orf194Q5T5A4 169 aa18.79■□□□□ 0.6
GTF2A1-201ENST00000298173 REC114Q7Z4M0 266 aa18.79■□□□□ 0.6
GTF2A1-201ENST00000298173 ARL2-SNX15V9GYD0 113 aa18.79■□□□□ 0.6
GTF2A1-201ENST00000298173 FAM74A7A6NL05 159 aa18.79■□□□□ 0.6
GTF2A1-201ENST00000298173 NBEAP1P0C6P0 100 aa18.79■□□□□ 0.6
GTF2A1-201ENST00000298173 IGLC2P0DOY2 106 aa18.79■□□□□ 0.6
GTF2A1-201ENST00000298173 HIST1H1EP10412 219 aaKnown RBP18.79■□□□□ 0.6
GTF2A1-201ENST00000298173 C8orf86Q6ZUL3 223 aa18.79■□□□□ 0.6
GTF2A1-201ENST00000298173 DAZ1Q9NQZ3 744 aaKnown RBP18.79■□□□□ 0.6
GTF2A1-201ENST00000298173 YTHDF2Q9Y5A9 579 aaKnown RBP18.79■□□□□ 0.6
GTF2A1-201ENST00000298173 ADARB2-AS1A8MUL3 147 aa18.78■□□□□ 0.6
GTF2A1-201ENST00000298173 H3BQ15 152 aa18.78■□□□□ 0.6
GTF2A1-201ENST00000298173 UBE2G2P60604 165 aa18.78■□□□□ 0.6
GTF2A1-201ENST00000298173 TM4SF20Q53R12 229 aa18.78■□□□□ 0.6
GTF2A1-201ENST00000298173 RXFP4Q8TDU9 374 aa18.78■□□□□ 0.6
GTF2A1-201ENST00000298173 ZNF586Q9NXT0 402 aa18.78■□□□□ 0.6
GTF2A1-201ENST00000298173 RPL7P18124 248 aaKnown RBP18.77■□□□□ 0.6
GTF2A1-201ENST00000298173 CD81P60033 236 aa18.77■□□□□ 0.6
GTF2A1-201ENST00000298173 MEF2BQ02080 365 aaPredicted RBP18.77■□□□□ 0.6
GTF2A1-201ENST00000298173 OR8I2Q8N0Y5 310 aa18.77■□□□□ 0.6
GTF2A1-201ENST00000298173 TREM1Q9NP99 234 aa18.77■□□□□ 0.6
GTF2A1-201ENST00000298173 UFC1Q9Y3C8 167 aa18.77■□□□□ 0.6
GTF2A1-201ENST00000298173 SMAD5-AS1Q9Y6J3 95 aa18.77■□□□□ 0.6
GTF2A1-201ENST00000298173 A0A1W2PRE2 83 aa18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 A8MWP6 167 aa18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 NDUFS6O75380 124 aaKnown RBP18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 C16orf54Q6UWD8 224 aa18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 C1QL4Q86Z23 238 aa18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 DPF1Q92782 380 aa18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 RAX2Q96IS3 184 aa18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 IGHV3OR16-13A0A075B7E8 117 aa18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 IGHV3-49A0A0A0MS15 119 aa18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 IGHV3-74A0A0B4J1X5 117 aa18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 IGHV7-4-1A0A0J9YVY3 117 aa18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 SRP19P09132 144 aaKnown RBP18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 SNRPCP09234 159 aaKnown RBP18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 SYNJ2BPP57105 145 aa18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 FHL3Q13643 280 aa18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 C17orf77Q96MU5 243 aa18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 TXNDC17Q9BRA2 123 aa18.76■□□□□ 0.59
GTF2A1-201ENST00000298173 IGHV3-66A0A0C4DH42 116 aa18.75■□□□□ 0.59
GTF2A1-201ENST00000298173 TMEM213A2RRL7 107 aa18.75■□□□□ 0.59
GTF2A1-201ENST00000298173 SLURP1P55000 103 aa18.75■□□□□ 0.59
GTF2A1-201ENST00000298173 CCDC28AQ8IWP9 274 aa18.75■□□□□ 0.59
GTF2A1-201ENST00000298173 OR4F17Q8NGA8 305 aa18.75■□□□□ 0.59
GTF2A1-201ENST00000298173 GPR82Q96P67 336 aa18.75■□□□□ 0.59
GTF2A1-201ENST00000298173 DUX3Q96PT4 197 aa18.75■□□□□ 0.59
GTF2A1-201ENST00000298173 OR4F4Q96R69 305 aa18.75■□□□□ 0.59
GTF2A1-201ENST00000298173 SMPXQ9UHP9 88 aa18.75■□□□□ 0.59
GTF2A1-201ENST00000298173 A0A1W2PRX2 142 aa18.74■□□□□ 0.59
GTF2A1-201ENST00000298173 TMEM218A2RU14 115 aa18.74■□□□□ 0.59
GTF2A1-201ENST00000298173 ATP5G3P48201 142 aa18.74■□□□□ 0.59
GTF2A1-201ENST00000298173 CST9LP1Q5W188 147 aa18.74■□□□□ 0.59
GTF2A1-201ENST00000298173 GLMPQ8WWB7 406 aa18.74■□□□□ 0.59
GTF2A1-201ENST00000298173 A0A1W2PS18 150 aa18.73■□□□□ 0.59
GTF2A1-201ENST00000298173 C11orf94C9JXX5 98 aa18.73■□□□□ 0.59
GTF2A1-201ENST00000298173 MYCNOSP40205 109 aa18.73■□□□□ 0.59
GTF2A1-201ENST00000298173 BLNKQ8WV28 456 aa18.73■□□□□ 0.59
GTF2A1-201ENST00000298173 SLC35B3Q9H1N7 401 aa18.73■□□□□ 0.59
GTF2A1-201ENST00000298173 TRBV19A0A075B6N1 114 aa18.73■□□□□ 0.59
GTF2A1-201ENST00000298173 CCL24O00175 119 aa18.73■□□□□ 0.59
GTF2A1-201ENST00000298173 NDUFB4O95168 129 aa18.73■□□□□ 0.59
GTF2A1-201ENST00000298173 EDN2P20800 178 aa18.73■□□□□ 0.59
GTF2A1-201ENST00000298173 PRIMA1Q86XR5 153 aa18.73■□□□□ 0.59
GTF2A1-201ENST00000298173 NARS2Q96I59 477 aaKnown RBP18.73■□□□□ 0.59
GTF2A1-201ENST00000298173 CHEK1O14757 476 aa18.72■□□□□ 0.59
GTF2A1-201ENST00000298173 RHPN1-AS1Q9BWJ2 59 aa18.72■□□□□ 0.59
GTF2A1-201ENST00000298173 NKX6-2Q9C056 277 aaPredicted RBP18.72■□□□□ 0.59
GTF2A1-201ENST00000298173 GGTLC3B5MD39 225 aa18.71■□□□□ 0.59
GTF2A1-201ENST00000298173 H3BTX0 84 aa18.71■□□□□ 0.59
GTF2A1-201ENST00000298173 AWAT1Q58HT5 328 aa18.71■□□□□ 0.59
GTF2A1-201ENST00000298173 NDUFA11Q86Y39 141 aa18.71■□□□□ 0.59
GTF2A1-201ENST00000298173 DLX4Q92988 240 aaPredicted RBP18.71■□□□□ 0.59
GTF2A1-201ENST00000298173 A0A087X0K7 114 aa18.7■□□□□ 0.58
GTF2A1-201ENST00000298173 RANP62826 216 aaKnown RBP18.7■□□□□ 0.58
GTF2A1-201ENST00000298173 SUMO1P63165 101 aaKnown RBP18.7■□□□□ 0.58
GTF2A1-201ENST00000298173 PDE6HQ13956 83 aa18.7■□□□□ 0.58
GTF2A1-201ENST00000298173 LINC00052Q96N35 136 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms