RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 NUTF2P61970 127 aaKnown RBP12.76□□□□□ -0.37
SMAD6-201ENST00000288840 C17orf77Q96MU5 243 aa12.76□□□□□ -0.37
SMAD6-201ENST00000288840 CLEC3BP05452 202 aa12.76□□□□□ -0.37
SMAD6-201ENST00000288840 NUP37Q8NFH4 326 aa12.76□□□□□ -0.37
SMAD6-201ENST00000288840 TMEM30BQ3MIR4 351 aa12.76□□□□□ -0.37
SMAD6-201ENST00000288840 LBHQ53QV2 105 aaPredicted RBP12.76□□□□□ -0.37
SMAD6-201ENST00000288840 COA6Q5JTJ3 125 aaKnown RBP12.76□□□□□ -0.37
SMAD6-201ENST00000288840 TEX45Q8NA69 505 aa12.76□□□□□ -0.37
SMAD6-201ENST00000288840 MYO9AB2RTY4 2548 aa12.75□□□□□ -0.37
SMAD6-201ENST00000288840 RAXQ9Y2V3 346 aa12.75□□□□□ -0.37
SMAD6-201ENST00000288840 ITGB1BP1O14713 200 aa12.75□□□□□ -0.37
SMAD6-201ENST00000288840 SP5Q6BEB4 398 aaPredicted RBP12.75□□□□□ -0.37
SMAD6-201ENST00000288840 IGFL3Q6UXB1 125 aa12.75□□□□□ -0.37
SMAD6-201ENST00000288840 Q6ZVH6 145 aa12.75□□□□□ -0.37
SMAD6-201ENST00000288840 MAP1LC3CQ9BXW4 147 aa12.75□□□□□ -0.37
SMAD6-201ENST00000288840 SLC25A39Q9BZJ4 359 aaPredicted RBP12.75□□□□□ -0.37
SMAD6-201ENST00000288840 OR4C46A6NHA9 309 aa12.75□□□□□ -0.37
SMAD6-201ENST00000288840 TCRAP04437 139 aa12.75□□□□□ -0.37
SMAD6-201ENST00000288840 TMEM155Q4W5P6 130 aa12.75□□□□□ -0.37
SMAD6-201ENST00000288840 TEX36Q5VZQ5 186 aa12.75□□□□□ -0.37
SMAD6-201ENST00000288840 C18orf32Q8TCD1 76 aa12.75□□□□□ -0.37
SMAD6-201ENST00000288840 C11orf52Q96A22 123 aa12.75□□□□□ -0.37
SMAD6-201ENST00000288840 BUB1B-PAK6H3BSN5 160 aa12.74□□□□□ -0.37
SMAD6-201ENST00000288840 M0QZK8 103 aa12.74□□□□□ -0.37
SMAD6-201ENST00000288840 TWIST1Q15672 202 aa12.74□□□□□ -0.37
SMAD6-201ENST00000288840 THYN1Q9P016 225 aa12.74□□□□□ -0.37
SMAD6-201ENST00000288840 UFC1Q9Y3C8 167 aa12.74□□□□□ -0.37
SMAD6-201ENST00000288840 C22orf46C9J442 243 aa12.74□□□□□ -0.37
SMAD6-201ENST00000288840 UQCRFS1P47985 274 aa12.74□□□□□ -0.37
SMAD6-201ENST00000288840 RIGQ13278 110 aa12.74□□□□□ -0.37
SMAD6-201ENST00000288840 TRAV9-1A0A075B6T8 112 aa12.74□□□□□ -0.37
SMAD6-201ENST00000288840 C2orf88Q9BSF0 95 aa12.74□□□□□ -0.37
SMAD6-201ENST00000288840 TMEM191AQ9H0A3 160 aa12.74□□□□□ -0.37
SMAD6-201ENST00000288840 KALRNO60229 2985 aa12.74□□□□□ -0.37
SMAD6-201ENST00000288840 POU2AF1Q16633 256 aa12.73□□□□□ -0.37
SMAD6-201ENST00000288840 UNQ5815/PRO19632Q6UWF5 114 aa12.73□□□□□ -0.37
SMAD6-201ENST00000288840 Q8TAT8 98 aa12.73□□□□□ -0.37
SMAD6-201ENST00000288840 FXYD5Q96DB9 178 aa12.73□□□□□ -0.37
SMAD6-201ENST00000288840 C18orf15Q96N68 181 aa12.73□□□□□ -0.37
SMAD6-201ENST00000288840 TMEM70Q9BUB7 260 aa12.73□□□□□ -0.37
SMAD6-201ENST00000288840 hDV102S1A0JD36 115 aa12.73□□□□□ -0.37
SMAD6-201ENST00000288840 TMEM189A5PLL7 270 aa12.73□□□□□ -0.37
SMAD6-201ENST00000288840 GPR183P32249 361 aa12.73□□□□□ -0.37
SMAD6-201ENST00000288840 C8orf46Q8TAG6 207 aa12.73□□□□□ -0.37
SMAD6-201ENST00000288840 RNF125Q96EQ8 232 aa12.73□□□□□ -0.37
SMAD6-201ENST00000288840 FAM167A-AS1Q96KT0 104 aa12.73□□□□□ -0.37
SMAD6-201ENST00000288840 HIVEP3Q5T1R4 2406 aa12.73□□□□□ -0.37
SMAD6-201ENST00000288840 HLA-DRB1P01911 266 aa12.73□□□□□ -0.37
SMAD6-201ENST00000288840 APOHP02749 345 aaPredicted RBP12.73□□□□□ -0.37
SMAD6-201ENST00000288840 NDFIP1Q9BT67 221 aa12.73□□□□□ -0.37
SMAD6-201ENST00000288840 IGKV2-40A0A087WW87 121 aaPredicted RBP12.72□□□□□ -0.37
SMAD6-201ENST00000288840 IGKV2D-40P01614 121 aaPredicted RBP12.72□□□□□ -0.37
SMAD6-201ENST00000288840 MFAP4P55083 255 aa12.72□□□□□ -0.37
SMAD6-201ENST00000288840 RBPMS2Q6ZRY4 209 aaKnown RBP12.72□□□□□ -0.37
SMAD6-201ENST00000288840 BEND2Q8NDZ0 799 aa12.72□□□□□ -0.37
SMAD6-201ENST00000288840 OR4C5Q8NGB2 326 aa12.72□□□□□ -0.37
SMAD6-201ENST00000288840 LAMTOR2Q9Y2Q5 125 aa12.72□□□□□ -0.37
SMAD6-201ENST00000288840 F11RQ9Y624 299 aaKnown RBP12.72□□□□□ -0.37
SMAD6-201ENST00000288840 NDUFS7O75251 213 aa12.72□□□□□ -0.37
SMAD6-201ENST00000288840 LY6DQ14210 128 aa12.72□□□□□ -0.37
SMAD6-201ENST00000288840 TACC2O95359 2948 aa12.72□□□□□ -0.37
SMAD6-201ENST00000288840 NPIPB5A8MRT5 1133 aa12.71□□□□□ -0.37
SMAD6-201ENST00000288840 NBR2O15453 112 aa12.71□□□□□ -0.37
SMAD6-201ENST00000288840 FCER1GP30273 86 aa12.71□□□□□ -0.37
SMAD6-201ENST00000288840 AARDQ4LEZ3 155 aa12.71□□□□□ -0.37
SMAD6-201ENST00000288840 ZNF841Q6ZN19 808 aa12.71□□□□□ -0.37
SMAD6-201ENST00000288840 IGLC7A0M8Q6 106 aa12.71□□□□□ -0.37
SMAD6-201ENST00000288840 PDLIM4P50479 330 aa12.71□□□□□ -0.37
SMAD6-201ENST00000288840 TPTE2P1Q5T6R2 138 aa12.71□□□□□ -0.37
SMAD6-201ENST00000288840 ZNF292O60281 2723 aa12.71□□□□□ -0.37
SMAD6-201ENST00000288840 ZFYVE26Q68DK2 2539 aa12.71□□□□□ -0.38
SMAD6-201ENST00000288840 A0A1B0GUT8 65 aa12.71□□□□□ -0.38
SMAD6-201ENST00000288840 COMPP49747 757 aaPredicted RBP12.71□□□□□ -0.38
SMAD6-201ENST00000288840 CR1LQ2VPA4 569 aa12.71□□□□□ -0.38
SMAD6-201ENST00000288840 OR10J3Q5JRS4 329 aa12.71□□□□□ -0.38
SMAD6-201ENST00000288840 RUSC1-AS1Q66K80 236 aa12.71□□□□□ -0.38
SMAD6-201ENST00000288840 LY96Q9Y6Y9 160 aa12.71□□□□□ -0.38
SMAD6-201ENST00000288840 NOTCH2Q04721 2471 aa12.7□□□□□ -0.38
SMAD6-201ENST00000288840 CEACAM4O75871 244 aa12.7□□□□□ -0.38
SMAD6-201ENST00000288840 TDGF1P3P51864 188 aa12.7□□□□□ -0.38
SMAD6-201ENST00000288840 FAM162BQ5T6X4 162 aa12.7□□□□□ -0.38
SMAD6-201ENST00000288840 CFAP161Q6P656 301 aa12.7□□□□□ -0.38
SMAD6-201ENST00000288840 TMEM116Q8NCL8 245 aa12.7□□□□□ -0.38
SMAD6-201ENST00000288840 AP5S1Q9NUS5 200 aa12.7□□□□□ -0.38
SMAD6-201ENST00000288840 TP53TG3Q9ULZ0 132 aa12.7□□□□□ -0.38
SMAD6-201ENST00000288840 PSG8Q9UQ74 426 aa12.7□□□□□ -0.38
SMAD6-201ENST00000288840 NDUFS8O00217 210 aa12.7□□□□□ -0.38
SMAD6-201ENST00000288840 NUDT3O95989 172 aa12.7□□□□□ -0.38
SMAD6-201ENST00000288840 C21orf62Q9NYP8 219 aa12.7□□□□□ -0.38
SMAD6-201ENST00000288840 C2CD3Q4AC94 2353 aa12.7□□□□□ -0.38
SMAD6-201ENST00000288840 CCDC168Q8NDH2 2452 aa12.7□□□□□ -0.38
SMAD6-201ENST00000288840 CKS2P33552 79 aa12.7□□□□□ -0.38
SMAD6-201ENST00000288840 FAM181BA6NEQ2 426 aa12.69□□□□□ -0.38
SMAD6-201ENST00000288840 PRSS1P07477 247 aa12.69□□□□□ -0.38
SMAD6-201ENST00000288840 Q0VG73 95 aa12.69□□□□□ -0.38
SMAD6-201ENST00000288840 TMEM249Q2WGJ8 235 aa12.69□□□□□ -0.38
SMAD6-201ENST00000288840 FMC1Q96HJ9 113 aa12.69□□□□□ -0.38
SMAD6-201ENST00000288840 RNF114Q9Y508 228 aa12.69□□□□□ -0.38
SMAD6-201ENST00000288840 USP9XQ93008 2570 aaPredicted RBP12.69□□□□□ -0.38
SMAD6-201ENST00000288840 SHISA9B4DS77 424 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms