RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 IGF2BP2-AS1Q96M15 143 aa10.02□□□□□ -0.81
TPM1-202ENST00000288398 HECTD4Q9Y4D8 3996 aa10.01□□□□□ -0.81
TPM1-202ENST00000288398 IGLV2-18A0A075B6J9 118 aa10.01□□□□□ -0.81
TPM1-202ENST00000288398 UBE2MP61081 183 aaKnown RBP10.01□□□□□ -0.81
TPM1-202ENST00000288398 B2MP61769 119 aa10.01□□□□□ -0.81
TPM1-202ENST00000288398 C1orf158Q8N1D5 194 aa10.01□□□□□ -0.81
TPM1-202ENST00000288398 C20orf173Q96LM9 149 aa10.01□□□□□ -0.81
TPM1-202ENST00000288398 ATG101Q9BSB4 218 aa10.01□□□□□ -0.81
TPM1-202ENST00000288398 RNF24Q9Y225 148 aa10.01□□□□□ -0.81
TPM1-202ENST00000288398 HIGD1AQ9Y241 93 aa10.01□□□□□ -0.81
TPM1-202ENST00000288398 HYPMO75409 117 aa10□□□□□ -0.81
TPM1-202ENST00000288398 OR5G3P0C626 314 aa10□□□□□ -0.81
TPM1-202ENST00000288398 RPL7P18124 248 aaKnown RBP10□□□□□ -0.81
TPM1-202ENST00000288398 GATA2P23769 480 aaPredicted RBP10□□□□□ -0.81
TPM1-202ENST00000288398 CNN1P51911 297 aaKnown RBP10□□□□□ -0.81
TPM1-202ENST00000288398 RHOBP62745 196 aa10□□□□□ -0.81
TPM1-202ENST00000288398 RNF212Q495C1 297 aa10□□□□□ -0.81
TPM1-202ENST00000288398 SPANXN2Q5MJ10 180 aa10□□□□□ -0.81
TPM1-202ENST00000288398 TMEM144Q7Z5S9 345 aa10□□□□□ -0.81
TPM1-202ENST00000288398 PSENENQ9NZ42 101 aa10□□□□□ -0.81
TPM1-202ENST00000288398 DNAH6Q9C0G6 4158 aa10□□□□□ -0.81
TPM1-202ENST00000288398 M0R2Z0 102 aa9.99□□□□□ -0.81
TPM1-202ENST00000288398 SELENOTP62341 195 aa9.99□□□□□ -0.81
TPM1-202ENST00000288398 SPINK13Q1W4C9 94 aa9.99□□□□□ -0.81
TPM1-202ENST00000288398 TRIQKQ629K1 86 aa9.99□□□□□ -0.81
TPM1-202ENST00000288398 TMEM88Q6PEY1 159 aa9.99□□□□□ -0.81
TPM1-202ENST00000288398 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.99□□□□□ -0.81
TPM1-202ENST00000288398 CYP2G1PQ6ZSU1 146 aa9.99□□□□□ -0.81
TPM1-202ENST00000288398 C15orf53Q8NAA6 179 aa9.99□□□□□ -0.81
TPM1-202ENST00000288398 KRTAP17-1Q9BYP8 105 aa9.99□□□□□ -0.81
TPM1-202ENST00000288398 SLC25A39Q9BZJ4 359 aaPredicted RBP9.99□□□□□ -0.81
TPM1-202ENST00000288398 PLA2G2EQ9NZK7 142 aa9.99□□□□□ -0.81
TPM1-202ENST00000288398 MGAT4CQ9UBM8 478 aa9.99□□□□□ -0.81
TPM1-202ENST00000288398 V9GYH0 126 aa9.99□□□□□ -0.81
TPM1-202ENST00000288398 LYRM9A8MSI8 78 aa9.98□□□□□ -0.81
TPM1-202ENST00000288398 PRSS46E5RG02 174 aa9.98□□□□□ -0.81
TPM1-202ENST00000288398 SSSCA1O60232 199 aa9.98□□□□□ -0.81
TPM1-202ENST00000288398 SCGB1D2O95969 90 aa9.98□□□□□ -0.81
TPM1-202ENST00000288398 LINC00869P0C866 280 aa9.98□□□□□ -0.81
TPM1-202ENST00000288398 ANXA7P20073 488 aaKnown RBP9.98□□□□□ -0.81
TPM1-202ENST00000288398 POLR2GP62487 172 aaKnown RBP eCLIP9.98□□□□□ -0.81
TPM1-202ENST00000288398 HIST1H1AQ02539 215 aaPredicted RBP9.98□□□□□ -0.81
TPM1-202ENST00000288398 RNF182Q8N6D2 247 aa9.98□□□□□ -0.81
TPM1-202ENST00000288398 OR11H7Q8NGC8 314 aa9.98□□□□□ -0.81
TPM1-202ENST00000288398 NDUFA13Q9P0J0 144 aa9.98□□□□□ -0.81
TPM1-202ENST00000288398 C9orf170A2RU37 121 aa9.97□□□□□ -0.81
TPM1-202ENST00000288398 NAP1L6A6NFF2 107 aa9.97□□□□□ -0.81
TPM1-202ENST00000288398 CENPXA8MT69 81 aa9.97□□□□□ -0.81
TPM1-202ENST00000288398 ZNF705GA8MUZ8 300 aaPredicted RBP9.97□□□□□ -0.81
TPM1-202ENST00000288398 H3BRN7 92 aa9.97□□□□□ -0.81
TPM1-202ENST00000288398 BOLA2-SMG1P6H3BVE0 249 aa9.97□□□□□ -0.81
TPM1-202ENST00000288398 RTL8CO15255 209 aa9.97□□□□□ -0.81
TPM1-202ENST00000288398 ADAP1O75689 374 aa9.97□□□□□ -0.81
TPM1-202ENST00000288398 DEFB130BP0DP73 79 aa9.97□□□□□ -0.81
TPM1-202ENST00000288398 DEFB130AP0DP74 79 aa9.97□□□□□ -0.81
TPM1-202ENST00000288398 MED14OSP0DP75 135 aa9.97□□□□□ -0.81
TPM1-202ENST00000288398 RRAS2P62070 204 aaPredicted RBP9.97□□□□□ -0.81
TPM1-202ENST00000288398 C4orf46Q504U0 113 aa9.97□□□□□ -0.81
TPM1-202ENST00000288398 IGFL4Q6B9Z1 124 aa9.97□□□□□ -0.81
TPM1-202ENST00000288398 LINC01587Q99440 93 aa9.97□□□□□ -0.81
TPM1-202ENST00000288398 SHANK2-AS3Q9BTD1 123 aa9.97□□□□□ -0.81
TPM1-202ENST00000288398 HERC2O95714 4834 aa9.97□□□□□ -0.81
TPM1-202ENST00000288398 A8MTW9 85 aa9.96□□□□□ -0.82
TPM1-202ENST00000288398 FAM3BP58499 235 aaPredicted RBP9.96□□□□□ -0.82
TPM1-202ENST00000288398 C1orf134Q5TEV5 83 aa9.96□□□□□ -0.82
TPM1-202ENST00000288398 AMTNQ6UX39 209 aa9.96□□□□□ -0.82
TPM1-202ENST00000288398 TMEM182Q6ZP80 229 aaPredicted RBP9.96□□□□□ -0.82
TPM1-202ENST00000288398 BAP18Q8IXM2 172 aa9.96□□□□□ -0.82
TPM1-202ENST00000288398 TMEM256Q8N2U0 113 aa9.96□□□□□ -0.82
TPM1-202ENST00000288398 OR10P1Q8NGE3 313 aa9.96□□□□□ -0.82
TPM1-202ENST00000288398 ARL6Q9H0F7 186 aa9.96□□□□□ -0.82
TPM1-202ENST00000288398 A0A1B0GVY2 172 aa9.95□□□□□ -0.82
TPM1-202ENST00000288398 F5H768 121 aa9.95□□□□□ -0.82
TPM1-202ENST00000288398 GOSR2O14653 212 aa9.95□□□□□ -0.82
TPM1-202ENST00000288398 HTN1P15515 57 aa9.95□□□□□ -0.82
TPM1-202ENST00000288398 TSPOP30536 169 aa9.95□□□□□ -0.82
TPM1-202ENST00000288398 DLK1P80370 383 aa9.95□□□□□ -0.82
TPM1-202ENST00000288398 ID3Q02535 119 aa9.95□□□□□ -0.82
TPM1-202ENST00000288398 TEPPQ6URK8 271 aa9.95□□□□□ -0.82
TPM1-202ENST00000288398 CCDC190Q86UF4 302 aa9.95□□□□□ -0.82
TPM1-202ENST00000288398 SMIM8Q96KF7 97 aa9.95□□□□□ -0.82
TPM1-202ENST00000288398 NPVFQ9HCQ7 196 aa9.95□□□□□ -0.82
TPM1-202ENST00000288398 TRAV12-2A0A075B6T6 113 aa9.94□□□□□ -0.82
TPM1-202ENST00000288398 TRAV8-2A0A0B4J237 113 aa9.94□□□□□ -0.82
TPM1-202ENST00000288398 LINC00854A0A1B0GVQ3 168 aa9.94□□□□□ -0.82
TPM1-202ENST00000288398 NDUFB6O95139 128 aa9.94□□□□□ -0.82
TPM1-202ENST00000288398 NUDT3O95989 172 aa9.94□□□□□ -0.82
TPM1-202ENST00000288398 ATP5G1P05496 136 aa9.94□□□□□ -0.82
TPM1-202ENST00000288398 OR4E1P0C645 316 aa9.94□□□□□ -0.82
TPM1-202ENST00000288398 METTL15P1P0C7V9 234 aa9.94□□□□□ -0.82
TPM1-202ENST00000288398 ATP5G3P48201 142 aa9.94□□□□□ -0.82
TPM1-202ENST00000288398 PSG3Q16557 428 aa9.94□□□□□ -0.82
TPM1-202ENST00000288398 IAH1Q2TAA2 248 aaPredicted RBP9.94□□□□□ -0.82
TPM1-202ENST00000288398 PXDC1Q5TGL8 231 aa9.94□□□□□ -0.82
TPM1-202ENST00000288398 ZNF546Q86UE3 836 aa9.94□□□□□ -0.82
TPM1-202ENST00000288398 OR8A1Q8NGG7 326 aa9.94□□□□□ -0.82
TPM1-202ENST00000288398 UHRF2Q96PU4 802 aa9.94□□□□□ -0.82
TPM1-202ENST00000288398 GSKIPQ9P0R6 139 aa9.94□□□□□ -0.82
TPM1-202ENST00000288398 A0A087X0K7 114 aa9.93□□□□□ -0.82
TPM1-202ENST00000288398 FNDC10F2Z333 226 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms