RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 SHANK2-AS3Q9BTD1 123 aa6.7□□□□□ -1.34
HMGN1-201ENST00000288344 NRN1Q9NPD7 142 aa6.7□□□□□ -1.34
HMGN1-201ENST00000288344 LSM5Q9Y4Y9 91 aaKnown RBP6.7□□□□□ -1.34
HMGN1-201ENST00000288344 TRAV8-2A0A0B4J237 113 aa6.69□□□□□ -1.34
HMGN1-201ENST00000288344 H3BRN7 92 aa6.69□□□□□ -1.34
HMGN1-201ENST00000288344 AGPAT2O15120 278 aa6.69□□□□□ -1.34
HMGN1-201ENST00000288344 FABP1P07148 127 aa6.69□□□□□ -1.34
HMGN1-201ENST00000288344 SELENOTP62341 195 aa6.69□□□□□ -1.34
HMGN1-201ENST00000288344 EWSR1Q01844 656 aaKnown RBP eCLIP6.69□□□□□ -1.34
HMGN1-201ENST00000288344 NHLH2Q02577 135 aa6.69□□□□□ -1.34
HMGN1-201ENST00000288344 MORN5Q5VZ52 161 aa6.69□□□□□ -1.34
HMGN1-201ENST00000288344 LEMD1Q68G75 181 aa6.69□□□□□ -1.34
HMGN1-201ENST00000288344 BPIFCQ8NFQ6 507 aa6.69□□□□□ -1.34
HMGN1-201ENST00000288344 PPP1R1CQ8WVI7 109 aa6.69□□□□□ -1.34
HMGN1-201ENST00000288344 SLC25A39Q9BZJ4 359 aaPredicted RBP6.69□□□□□ -1.34
HMGN1-201ENST00000288344 CSTL1Q9H114 145 aa6.69□□□□□ -1.34
HMGN1-201ENST00000288344 SLC25A32Q9H2D1 315 aa6.69□□□□□ -1.34
HMGN1-201ENST00000288344 PAIP2BQ9ULR5 123 aaKnown RBP6.69□□□□□ -1.34
HMGN1-201ENST00000288344 H3BMM0 161 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 DNASE2O00115 360 aaPredicted RBP6.68□□□□□ -1.34
HMGN1-201ENST00000288344 GOSR2O14653 212 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 MPC2O95563 127 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 ZNF688P0C7X2 276 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 S100A11P31949 105 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 LYZP61626 148 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 CYCSP99999 105 aaKnown RBP6.68□□□□□ -1.34
HMGN1-201ENST00000288344 AKR1C1Q04828 323 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 SLC38A11Q08AI6 406 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 OXA1LQ15070 435 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 GDF5OSQ5U4N7 250 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 STXBP6Q8NFX7 210 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 OR11H7Q8NGC8 314 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 C20orf173Q96LM9 149 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 PBDC1Q9BVG4 233 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 SCRT1Q9BWW7 348 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 ALG5Q9Y673 324 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 KMT2AQ03164 3969 aa6.68□□□□□ -1.34
HMGN1-201ENST00000288344 ALMS1Q8TCU4 4167 aa6.67□□□□□ -1.34
HMGN1-201ENST00000288344 KNCNA6PVL3 124 aa6.67□□□□□ -1.34
HMGN1-201ENST00000288344 E5RGE8 158 aa6.67□□□□□ -1.34
HMGN1-201ENST00000288344 G3V3Q6 166 aa6.67□□□□□ -1.34
HMGN1-201ENST00000288344 HYPMO75409 117 aa6.67□□□□□ -1.34
HMGN1-201ENST00000288344 RPL35AP18077 110 aaKnown RBP6.67□□□□□ -1.34
HMGN1-201ENST00000288344 ORM2P19652 201 aa6.67□□□□□ -1.34
HMGN1-201ENST00000288344 NUP62P37198 522 aaPredicted RBP6.67□□□□□ -1.34
HMGN1-201ENST00000288344 RPL29P47914 159 aaKnown RBP6.67□□□□□ -1.34
HMGN1-201ENST00000288344 DEFB1P60022 68 aa6.67□□□□□ -1.34
HMGN1-201ENST00000288344 SRSF3P84103 164 aaKnown RBP6.67□□□□□ -1.34
HMGN1-201ENST00000288344 OPCMLQ14982 345 aa6.67□□□□□ -1.34
HMGN1-201ENST00000288344 ATP6V1FQ16864 119 aa6.67□□□□□ -1.34
HMGN1-201ENST00000288344 PXDC1Q5TGL8 231 aa6.67□□□□□ -1.34
HMGN1-201ENST00000288344 NARS2Q96I59 477 aaKnown RBP6.67□□□□□ -1.34
HMGN1-201ENST00000288344 UHRF2Q96PU4 802 aa6.67□□□□□ -1.34
HMGN1-201ENST00000288344 MGAT4CQ9UBM8 478 aa6.67□□□□□ -1.34
HMGN1-201ENST00000288344 FBXL17Q9UF56 701 aa6.67□□□□□ -1.34
HMGN1-201ENST00000288344 A0A087X0K7 114 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 C3orf84H3BNL1 204 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 L7N2F9 121 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 ISLRO14498 428 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 SPRY2O43597 315 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 C4BPBP20851 252 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 CAV2P51636 162 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 APOC4P55056 127 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 VAMP2P63027 116 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 FCN2Q15485 313 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 Q5BKY6 102 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 CASC10Q5T4H9 136 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 LCE3BQ5TA77 95 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 MIC13Q5XKP0 118 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 AMTNQ6UX39 209 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 OR8I2Q8N0Y5 310 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 TMEM217Q8N7C4 229 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 OR1B1Q8NGR6 318 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 MUC7Q8TAX7 377 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 SAT2Q96F10 170 aaPredicted RBP6.66□□□□□ -1.34
HMGN1-201ENST00000288344 RSG1Q9BU20 258 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 TMEM147Q9BVK8 224 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 ARV1Q9H2C2 271 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 UQCC1Q9NVA1 299 aa6.66□□□□□ -1.34
HMGN1-201ENST00000288344 SMCO3A2RU48 225 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 ZNF705EA8MWA4 302 aaPredicted RBP6.65□□□□□ -1.35
HMGN1-201ENST00000288344 IGLC2P0DOY2 106 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 HLA-DRB4P13762 266 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 PVALBP20472 110 aaPredicted RBP6.65□□□□□ -1.35
HMGN1-201ENST00000288344 CAMLGP49069 296 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 PSMB3P49720 205 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 BCAP31P51572 246 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 S100A10P60903 97 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 DEFB135Q30KP9 77 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 PSMG4Q5JS54 123 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 ZNF546Q86UE3 836 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 ZNF709Q8N972 641 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 OR5C1Q8NGR4 320 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 GPR82Q96P67 336 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 ARL6Q9H0F7 186 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 SAV1Q9H4B6 383 aaPredicted RBP6.65□□□□□ -1.35
HMGN1-201ENST00000288344 WFDC1Q9HC57 220 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 DNAJC4Q9NNZ3 241 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 HIGD1AQ9Y241 93 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms